prot_M-pyrifera_M_contig89838.20829.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig89838.20829.1
Unique Nameprot_M-pyrifera_M_contig89838.20829.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length111
Homology
BLAST of mRNA_M-pyrifera_M_contig89838.20829.1 vs. uniprot
Match: A0A0A9WYH8_LYGHE (DNA excision repair protein haywire n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9WYH8_LYGHE)

HSP 1 Score: 123 bits (309), Expect = 1.220e-32
Identity = 62/111 (55.86%), Postives = 80/111 (72.07%), Query Frame = 0
Query:    1 LESASPLYRQARDLLVAVSEPVTRPDHIHEYKLDADALVAAASMGLDGDSIISALERFSKVWLTEGVKAFIQRCTENYGKAKLVLMRGGYRIESDYPEVLERLAREQVVRE 111
            LES SPLYR A D L+A++EPV RP+HIHEYKL A +L AA S+GL+ D II  L R SK  + EG+  FI+ CT +YGK KLVL    Y IES +PEVL++L ++ V++E
Sbjct:   94 LESFSPLYRHAHDFLIAIAEPVCRPEHIHEYKLTAYSLYAAVSVGLETDDIIEYLRRLSKTSMPEGIVEFIKLCTLSYGKVKLVLKHNKYFIESPFPEVLQKLLKDPVIQE 204          
BLAST of mRNA_M-pyrifera_M_contig89838.20829.1 vs. uniprot
Match: A0A161MNL4_TRIIF (Dna excision repair protein haywire (Fragment) n=1 Tax=Triatoma infestans TaxID=30076 RepID=A0A161MNL4_TRIIF)

HSP 1 Score: 115 bits (289), Expect = 9.270e-31
Identity = 58/111 (52.25%), Postives = 79/111 (71.17%), Query Frame = 0
Query:    1 LESASPLYRQARDLLVAVSEPVTRPDHIHEYKLDADALVAAASMGLDGDSIISALERFSKVWLTEGVKAFIQRCTENYGKAKLVLMRGGYRIESDYPEVLERLAREQVVRE 111
            LES SP+Y+ A D L+A+SEPV RP+HI EYKL A +L AA S+GL+ + II  L R SK  + EG+  FI+ CT +YGK KLVL    Y IES +P+VL++L ++ V++E
Sbjct:   43 LESFSPVYKHAHDFLIAISEPVCRPEHIQEYKLTAYSLYAAVSVGLETNDIIEYLRRLSKTSIPEGIIEFIKLCTLSYGKVKLVLKHNKYFIESPFPDVLQKLLKDPVIQE 153          
BLAST of mRNA_M-pyrifera_M_contig89838.20829.1 vs. uniprot
Match: A0A812RKQ7_9DINO (DNA helicase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812RKQ7_9DINO)

HSP 1 Score: 124 bits (311), Expect = 9.590e-31
Identity = 64/111 (57.66%), Postives = 79/111 (71.17%), Query Frame = 0
Query:    1 LESASPLYRQARDLLVAVSEPVTRPDHIHEYKLDADALVAAASMGLDGDSIISALERFSKVWLTEGVKAFIQRCTENYGKAKLVLMRGGYRIESDYPEVLERLAREQVVRE 111
            LE+ SPLY QARD LVA+ EP +RP+ IHEY LD  AL AAASMGL GD I  AL+RFSK  +++GV+ F++ CT  YGK KLVL R  + +ES Y  +L  LA + VVRE
Sbjct:   68 LEAFSPLYEQARDFLVAICEPKSRPEFIHEYALDRHALFAAASMGLTGDLICDALQRFSKCRVSQGVQTFVRACTSGYGKVKLVLHRSRFYVESPYSALLRSLAADPVVRE 178          
BLAST of mRNA_M-pyrifera_M_contig89838.20829.1 vs. uniprot
Match: A0A146LTX2_LYGHE (General transcription and DNA repair factor IIH helicase subunit XPB n=4 Tax=Lygus hesperus TaxID=30085 RepID=A0A146LTX2_LYGHE)

HSP 1 Score: 123 bits (309), Expect = 1.740e-30
Identity = 62/111 (55.86%), Postives = 80/111 (72.07%), Query Frame = 0
Query:    1 LESASPLYRQARDLLVAVSEPVTRPDHIHEYKLDADALVAAASMGLDGDSIISALERFSKVWLTEGVKAFIQRCTENYGKAKLVLMRGGYRIESDYPEVLERLAREQVVRE 111
            LES SPLYR A D L+A++EPV RP+HIHEYKL A +L AA S+GL+ D II  L R SK  + EG+  FI+ CT +YGK KLVL    Y IES +PEVL++L ++ V++E
Sbjct:   94 LESFSPLYRHAHDFLIAIAEPVCRPEHIHEYKLTAYSLYAAVSVGLETDDIIEYLRRLSKTSMPEGIVEFIKLCTLSYGKVKLVLKHNKYFIESPFPEVLQKLLKDPVIQE 204          
BLAST of mRNA_M-pyrifera_M_contig89838.20829.1 vs. uniprot
Match: A0A1B6MEN8_9HEMI (Helicase_C_3 domain-containing protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6MEN8_9HEMI)

HSP 1 Score: 117 bits (293), Expect = 2.820e-30
Identity = 56/111 (50.45%), Postives = 80/111 (72.07%), Query Frame = 0
Query:    1 LESASPLYRQARDLLVAVSEPVTRPDHIHEYKLDADALVAAASMGLDGDSIISALERFSKVWLTEGVKAFIQRCTENYGKAKLVLMRGGYRIESDYPEVLERLAREQVVRE 111
            LES SP+Y+ A D L+A+SEPV RP+HIHEYKL A +L AA S+GL+   I+  ++R SK  + +G+  FI+ CT +YGK KLVL    Y +ES +PEVL++L ++ V++E
Sbjct:   91 LESFSPVYKHAHDFLIAISEPVCRPEHIHEYKLTAYSLYAAVSVGLETHDIVEYIKRLSKTTVPDGIVEFIKLCTLSYGKVKLVLKHNKYFVESPFPEVLQKLLKDPVIQE 201          
BLAST of mRNA_M-pyrifera_M_contig89838.20829.1 vs. uniprot
Match: A0A1B6CB72_9HEMI (Helicase_C_3 domain-containing protein n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6CB72_9HEMI)

HSP 1 Score: 118 bits (296), Expect = 4.690e-30
Identity = 58/111 (52.25%), Postives = 80/111 (72.07%), Query Frame = 0
Query:    1 LESASPLYRQARDLLVAVSEPVTRPDHIHEYKLDADALVAAASMGLDGDSIISALERFSKVWLTEGVKAFIQRCTENYGKAKLVLMRGGYRIESDYPEVLERLAREQVVRE 111
            LES SP+Y+ A D L+A+SEPV RP+HIHEYKL A +L AA S+GL+   II  L+R SK  + +G+  FI+ CT +YGK KLVL    Y +ES +PEVL++L ++ V++E
Sbjct:   92 LESFSPVYKHAHDFLIAISEPVCRPEHIHEYKLTAYSLYAAVSVGLETHDIIEYLKRLSKTSIPDGIVEFIKLCTLSYGKVKLVLKHNKYFVESPFPEVLQKLLKDPVIQE 202          
BLAST of mRNA_M-pyrifera_M_contig89838.20829.1 vs. uniprot
Match: A0A811UYJ1_CERCA ((Mediterranean fruit fly) hypothetical protein n=1 Tax=Ceratitis capitata TaxID=7213 RepID=A0A811UYJ1_CERCA)

HSP 1 Score: 117 bits (292), Expect = 1.050e-29
Identity = 58/111 (52.25%), Postives = 79/111 (71.17%), Query Frame = 0
Query:    1 LESASPLYRQARDLLVAVSEPVTRPDHIHEYKLDADALVAAASMGLDGDSIISALERFSKVWLTEGVKAFIQRCTENYGKAKLVLMRGGYRIESDYPEVLERLAREQVVRE 111
            LES SP+Y+ A D L+A+SEPV RP+HIHEYKL A +L AA S+GL    II  L+R SK  + EG+  FI+ CT +YGK KLVL    Y IES +PE+L++L ++ V+++
Sbjct:   35 LESFSPVYKHAHDFLIAISEPVCRPEHIHEYKLTAYSLYAAVSVGLQTHDIIEYLKRLSKTSIPEGIIEFIKLCTLSYGKVKLVLKHNRYFIESPHPEILQKLLKDPVIQQ 145          
BLAST of mRNA_M-pyrifera_M_contig89838.20829.1 vs. uniprot
Match: A0A6H5HJ44_9HEMI (DNA helicase n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5HJ44_9HEMI)

HSP 1 Score: 121 bits (303), Expect = 1.080e-29
Identity = 60/111 (54.05%), Postives = 80/111 (72.07%), Query Frame = 0
Query:    1 LESASPLYRQARDLLVAVSEPVTRPDHIHEYKLDADALVAAASMGLDGDSIISALERFSKVWLTEGVKAFIQRCTENYGKAKLVLMRGGYRIESDYPEVLERLAREQVVRE 111
            LES SP+Y+ A D L+A+SEPV RP+HIHEYKL A +L AA S+GL+ D II  L R SK  + +G+  FI+ CT +YGK KLVL    Y IES +PEVL++L ++ V++E
Sbjct:   91 LESFSPVYKHAHDFLIAISEPVCRPEHIHEYKLTAYSLYAAVSVGLETDDIIEYLRRLSKTSIPDGIVEFIKLCTLSYGKVKLVLKHNKYFIESPFPEVLQKLLKDPVIQE 201          
BLAST of mRNA_M-pyrifera_M_contig89838.20829.1 vs. uniprot
Match: A0A6A4X0A9_AMPAM (General transcription and DNA repair factor IIH helicase subunit XPB n=5 Tax=Thoracicalcarea TaxID=2899756 RepID=A0A6A4X0A9_AMPAM)

HSP 1 Score: 121 bits (303), Expect = 1.120e-29
Identity = 60/109 (55.05%), Postives = 79/109 (72.48%), Query Frame = 0
Query:    1 LESASPLYRQARDLLVAVSEPVTRPDHIHEYKLDADALVAAASMGLDGDSIISALERFSKVWLTEGVKAFIQRCTENYGKAKLVLMRGGYRIESDYPEVLERLAREQVV 109
            LES SP+YR A D L+A+SEPV RP+HIHEYKL A +L AA S+GL  D II  L+R SK  + +G+  FI+ CT +YGKAKLVL    Y IES +PEV+++L ++ V+
Sbjct:   82 LESFSPVYRHAHDFLIAISEPVCRPEHIHEYKLTAYSLYAAVSVGLQTDDIIEYLKRLSKTSIPDGIIEFIRLCTVSYGKAKLVLKHNRYFIESQHPEVIQKLLKDPVI 190          
BLAST of mRNA_M-pyrifera_M_contig89838.20829.1 vs. uniprot
Match: A0A1A9Z3I2_GLOPL (General transcription and DNA repair factor IIH helicase subunit XPB n=5 Tax=Glossina TaxID=7393 RepID=A0A1A9Z3I2_GLOPL)

HSP 1 Score: 121 bits (303), Expect = 1.150e-29
Identity = 61/111 (54.95%), Postives = 79/111 (71.17%), Query Frame = 0
Query:    1 LESASPLYRQARDLLVAVSEPVTRPDHIHEYKLDADALVAAASMGLDGDSIISALERFSKVWLTEGVKAFIQRCTENYGKAKLVLMRGGYRIESDYPEVLERLAREQVVRE 111
            LES SP+Y+ A DLL+A+SEPV RP+HIHEYKL A +L AA S+GL    II  L R SK  + EG+  FI+ CT +YGK KLVL    Y IES YPE+L++L R+ V+++
Sbjct:  102 LESFSPIYKHAHDLLIAISEPVCRPEHIHEYKLTAYSLYAAVSVGLQTHDIIEYLRRLSKTTVPEGILEFIKLCTLSYGKVKLVLKYNRYFIESPYPEILQKLLRDPVIQQ 212          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89838.20829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0A9WYH8_LYGHE1.220e-3255.86DNA excision repair protein haywire n=1 Tax=Lygus ... [more]
A0A161MNL4_TRIIF9.270e-3152.25Dna excision repair protein haywire (Fragment) n=1... [more]
A0A812RKQ7_9DINO9.590e-3157.66DNA helicase n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A146LTX2_LYGHE1.740e-3055.86General transcription and DNA repair factor IIH he... [more]
A0A1B6MEN8_9HEMI2.820e-3050.45Helicase_C_3 domain-containing protein (Fragment) ... [more]
A0A1B6CB72_9HEMI4.690e-3052.25Helicase_C_3 domain-containing protein n=1 Tax=Cla... [more]
A0A811UYJ1_CERCA1.050e-2952.25(Mediterranean fruit fly) hypothetical protein n=1... [more]
A0A6H5HJ44_9HEMI1.080e-2954.05DNA helicase n=1 Tax=Nesidiocoris tenuis TaxID=355... [more]
A0A6A4X0A9_AMPAM1.120e-2955.05General transcription and DNA repair factor IIH he... [more]
A0A1A9Z3I2_GLOPL1.150e-2954.95General transcription and DNA repair factor IIH he... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032830Helicase XPB/Ssl2, N-terminal domainPFAMPF13625Helicase_C_3coord: 1..110
e-value: 4.5E-25
score: 88.2
NoneNo IPR availablePANTHERPTHR11274:SF0GENERAL TRANSCRIPTION AND DNA REPAIR FACTOR IIH HELICASE SUBUNIT XPBcoord: 1..110
NoneNo IPR availablePANTHERPTHR11274RAD25/XP-B DNA REPAIR HELICASEcoord: 1..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89838contigM-pyrifera_M_contig89838:2..334 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89838.20829.1mRNA_M-pyrifera_M_contig89838.20829.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig89838 2..334 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig89838.20829.1 ID=prot_M-pyrifera_M_contig89838.20829.1|Name=mRNA_M-pyrifera_M_contig89838.20829.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp
LESASPLYRQARDLLVAVSEPVTRPDHIHEYKLDADALVAAASMGLDGDS
IISALERFSKVWLTEGVKAFIQRCTENYGKAKLVLMRGGYRIESDYPEVL
ERLAREQVVRE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032830XPB/Ssl2_N