prot_M-pyrifera_M_contig89819.20822.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig89819.20822.1
Unique Nameprot_M-pyrifera_M_contig89819.20822.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length217
Homology
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A6G0I0H0_LARCR (Helicase C-terminal domain-containing protein n=5 Tax=Percomorphaceae TaxID=1489872 RepID=A0A6G0I0H0_LARCR)

HSP 1 Score: 243 bits (621), Expect = 1.070e-73
Identity = 122/217 (56.22%), Postives = 168/217 (77.42%), Query Frame = 0
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ  A+  +IP+  ++V++  + ++  ++   +++  + P  CL FL+PGR+V++++ DVD+GWGVV+
Sbjct:   50 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKYEEQYHAI--EIPNEESVVTYFKIRQQLAKLGKEIQEFVHKPKYCLPFLQPGRLVKVKNDDVDFGWGVVV 262          
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: UPI00105540D7 (exosome RNA helicase MTR4 n=1 Tax=Gouania willdenowi TaxID=441366 RepID=UPI00105540D7)

HSP 1 Score: 241 bits (615), Expect = 5.090e-72
Identity = 121/217 (55.76%), Postives = 167/217 (76.96%), Query Frame = 0
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ  A+  +IP+  ++V++  + ++  ++   + +  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  460 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHAI--EIPNEESVVAYFKIRQQLAKLGKEILEFIHKPKYCLPFLQPGRLVKVKNEDADFGWGVVV 672          
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A3P8WWQ2_CYNSE (Mtr4 exosome RNA helicase n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8WWQ2_CYNSE)

HSP 1 Score: 245 bits (626), Expect = 5.930e-72
Identity = 121/217 (55.76%), Postives = 169/217 (77.88%), Query Frame = 0
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ  ++  +IP+  +++++  + ++  ++   +++  N P  CL FL+PGR+V++R+QD+D+GWG+V+
Sbjct:  453 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHSI--EIPNEESVITYFKIRQQLAKLAKDIQEFINKPKYCLPFLQPGRLVKVRNQDLDFGWGIVV 665          
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A087XC50_POEFO (Mtr4 exosome RNA helicase n=2 Tax=Poecilia formosa TaxID=48698 RepID=A0A087XC50_POEFO)

HSP 1 Score: 239 bits (611), Expect = 5.240e-71
Identity = 119/217 (54.84%), Postives = 167/217 (76.96%), Query Frame = 0
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  +Q   +  +IP+  ++V++  + ++  ++   +++  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  209 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEDQYHTI--EIPNEESVVTYFKIRQQLAKLGKEIQEFIHKPKYCLPFLQPGRLVKVKNEDTDFGWGVVV 421          
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A3Q0SCM6_AMPCI (Mtr4 exosome RNA helicase n=1 Tax=Amphilophus citrinellus TaxID=61819 RepID=A0A3Q0SCM6_AMPCI)

HSP 1 Score: 242 bits (617), Expect = 8.080e-71
Identity = 121/217 (55.76%), Postives = 167/217 (76.96%), Query Frame = 0
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ   +  +IP+   +V++  + ++  ++   +++  + P  CL FL+PGR+V+++++DVD+GWGVV+
Sbjct:  418 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHTI--EIPNEENVVTYFKIRQQLAKLGKDIQEFIHKPKYCLPFLQPGRLVKVKNEDVDFGWGVVV 630          
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A3Q3MWB7_9LABR (Mtr4 exosome RNA helicase n=23 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3Q3MWB7_9LABR)

HSP 1 Score: 242 bits (618), Expect = 8.210e-71
Identity = 121/217 (55.76%), Postives = 168/217 (77.42%), Query Frame = 0
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG +HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ  A+  +IP+   +V++  + ++  ++   +++  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  459 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKSHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKYEEQYHAI--EIPNEEGVVTYFKIRQQLAKLGKEIQEFTHKPKYCLPFLQPGRLVKVKNEDADFGWGVVV 671          
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A667YWA3_9TELE (Mtr4 exosome RNA helicase n=2 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YWA3_9TELE)

HSP 1 Score: 242 bits (617), Expect = 8.930e-71
Identity = 122/217 (56.22%), Postives = 167/217 (76.96%), Query Frame = 0
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+D RGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ  A+  +IP+  ++VS+  + ++  R+   +++  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  430 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDKRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHAI--EIPNEESVVSYYKIRQQLARLGKEIQEFIHKPKYCLPFLQPGRLVKVKNEDADFGWGVVV 642          
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A3Q3CKI2_HAPBU (Mtr4 exosome RNA helicase n=4 Tax=Haplochromini TaxID=319058 RepID=A0A3Q3CKI2_HAPBU)

HSP 1 Score: 241 bits (616), Expect = 1.200e-70
Identity = 120/217 (55.30%), Postives = 167/217 (76.96%), Query Frame = 0
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ   +  +IP+  ++V++  + ++  ++   +++  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  434 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHTI--EIPNEESVVTYFKIRQQLAKLSKEIQEFIHKPKYCLPFLQPGRLVKVKNEDADFGWGVVM 646          
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A3B5A4B2_9TELE (Mtr4 exosome RNA helicase n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B5A4B2_9TELE)

HSP 1 Score: 241 bits (616), Expect = 1.230e-70
Identity = 120/217 (55.30%), Postives = 169/217 (77.88%), Query Frame = 0
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG +HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ V +  +IP+  ++V++  + ++  ++   +++  + P  CL FL+PGR+V++++++ D+GWGVV+
Sbjct:  429 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKSHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYVNI--EIPNEESVVTYFKIRQQLAKLGKEIQEFIHKPKYCLPFLQPGRLVKVKNEEADFGWGVVV 641          
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Match: A0A673C7S6_9TELE (Mtr4 exosome RNA helicase n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673C7S6_9TELE)

HSP 1 Score: 241 bits (615), Expect = 1.370e-70
Identity = 121/217 (55.76%), Postives = 167/217 (76.96%), Query Frame = 0
Query:    1 LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTLSAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSAFHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTEQLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGRIVRIRDQDVDWGWGVVL 217
            LKE +EILF E L+K LFATETFAMGINMPA+TV+FTS+RKFDG  HR +++GEYIQMSGRAGRRG+DDRGIVI M D KM P   KQLL+G+ADPLNSAFHL YNM+LNL RV++   +PE MLE+SF+QFQ  +A P + + +K+  EQ   +  DIP+  ++V++  + ++  ++   +++  + P  CL FL+PGR+V+++++D D+GWGVV+
Sbjct:  402 LKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEI--NPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHKI--DIPNEESVVTYFKIRQQLAKLGKDIQEFIHKPKHCLPFLQPGRLVKVKNEDADFGWGVVV 614          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89819.20822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0I0H0_LARCR1.070e-7356.22Helicase C-terminal domain-containing protein n=5 ... [more]
UPI00105540D75.090e-7255.76exosome RNA helicase MTR4 n=1 Tax=Gouania willdeno... [more]
A0A3P8WWQ2_CYNSE5.930e-7255.76Mtr4 exosome RNA helicase n=1 Tax=Cynoglossus semi... [more]
A0A087XC50_POEFO5.240e-7154.84Mtr4 exosome RNA helicase n=2 Tax=Poecilia formosa... [more]
A0A3Q0SCM6_AMPCI8.080e-7155.76Mtr4 exosome RNA helicase n=1 Tax=Amphilophus citr... [more]
A0A3Q3MWB7_9LABR8.210e-7155.76Mtr4 exosome RNA helicase n=23 Tax=Percomorphaceae... [more]
A0A667YWA3_9TELE8.930e-7156.22Mtr4 exosome RNA helicase n=2 Tax=Myripristis murd... [more]
A0A3Q3CKI2_HAPBU1.200e-7055.30Mtr4 exosome RNA helicase n=4 Tax=Haplochromini Ta... [more]
A0A3B5A4B2_9TELE1.230e-7055.30Mtr4 exosome RNA helicase n=1 Tax=Stegastes partit... [more]
A0A673C7S6_9TELE1.370e-7055.76Mtr4 exosome RNA helicase n=1 Tax=Sphaeramia orbic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..98
e-value: 7.8E-40
score: 138.7
NoneNo IPR availableGENE3D1.20.1500.20coord: 129..212
e-value: 3.2E-5
score: 25.8
NoneNo IPR availablePANTHERPTHR12131:SF7EXOSOME RNA HELICASE MTR4coord: 1..216
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 1..216
IPR025696rRNA-processing arch domainPFAMPF13234rRNA_proc-archcoord: 122..217
e-value: 5.7E-23
score: 82.2
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 11..66
e-value: 2.1E-5
score: 24.8
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..115
score: 9.911
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89819contigM-pyrifera_M_contig89819:2..652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89819.20822.1mRNA_M-pyrifera_M_contig89819.20822.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig89819 2..652 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig89819.20822.1 ID=prot_M-pyrifera_M_contig89819.20822.1|Name=mRNA_M-pyrifera_M_contig89819.20822.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp
LKEVVEILFGESLVKVLFATETFAMGINMPAKTVIFTSSRKFDGVTHRTL
SAGEYIQMSGRAGRRGLDDRGIVILMTDSKMEPTDAKQLLRGTADPLNSA
FHLGYNMLLNLTRVQDAGADPESMLERSFHQFQARQARPAMEKALKEKTE
QLVAVSKDIPDLATLVSFDALLREGRRVRDSMRQLENSPNVCLRFLKPGR
IVRIRDQDVDWGWGVVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025696rRNA_proc-arch_dom
IPR001650Helicase_C
IPR027417P-loop_NTPase