mRNA_M-pyrifera_M_contig89810.20816.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89810.20816.1
Unique NamemRNA_M-pyrifera_M_contig89810.20816.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89810.20816.1 vs. uniprot
Match: A0A6B2L361_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L361_9EUKA)

HSP 1 Score: 185 bits (470), Expect = 3.600e-52
Identity = 99/246 (40.24%), Postives = 138/246 (56.10%), Query Frame = 1
Query:    1 PFLLLPGIPDRHNLQPLYDEAALAIAAVDPDRVVLFESITW------DDMFGWWLLSTGFTHAPGGAGRAAQSALAFHYYSQPNFGDKRAYLKRRVEDAAALNVGALVTEFDLGSSESS-ADTMDALDELLVGWTAWEYKPYAGSLANGTCTGCGSGPWHRDGTLDAGVVRVLARTYAPAVAGDVMAMKFDRSTSEFQLRFAATAPDASAPTVVFLSPKVFYPGGYKVEVEPAGALAWSKADDQHL 717
            P LLLP I D  NLQP YD  A  I   + + ++ FE +TW      D+         GF HAPGG   A QS  ++HYY  PN GDK +Y +RR + +  L+VGA++TEF + S+ +  A TM  ++     W  WEYK +AGSL NGTCTGCG GPW+ DG+L+  +V+ L+RTYA AVAG V    FD  T++++L +         PT ++ + +++YP  Y   V+P            HL
Sbjct:  214 PDLLLPWIADSTNLQPFYDTIAPMIREANKNHLIFFEPVTWSGEPINDE-------KVGFDHAPGGEQFANQSVFSYHYYDPPNLGDKLSYFQRRTKVSEDLSVGAMLTEFSVDSNFTEMASTMATVESFQTSWIGWEYKAFAGSLPNGTCTGCGIGPWNPDGSLNVPMVKTLSRTYAQAVAGMVNQSIFDDKTAQYKLTYQVNKA-CKKPTEIYFNQELYYPKSYTCSVDPPNLAQCLLVSKNHL 451          
BLAST of mRNA_M-pyrifera_M_contig89810.20816.1 vs. uniprot
Match: X6N759_RETFI (Glycosyl hydrolase family protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6N759_RETFI)

HSP 1 Score: 176 bits (445), Expect = 1.970e-50
Identity = 93/225 (41.33%), Postives = 128/225 (56.89%), Query Frame = 1
Query:   85 DPDRVVLFESITWDDMFGWWLLSTGFTHAPGGAGRAAQSALAFHYYSQPNFGDKRAYLKRRVEDAAALNVGALVTEFDLGSSESSADT-------MDALDELLVGWTAWEYKPYAGSLANGTCTGCGSGPWHRDGTLDAGVVRVLARTYAPAVAGDVMAMKFDRSTSEFQLRFAATAPDASAPTVVFLSPKVFYPGGYKVEVEPAGALA--WSKADDQHLHFVTT 732
            D  R++ FES+TW D F      TGFTH PGG   A QS  +FHYYS PN G+   Y   RV DA +    A +TEFD+ + + S +T       MD  D   + W  WEYKP AGSL NGTCTGCG G +  +GT++  V +V++RT+A  V+G+V  ++FD+ T+ F+L F       + PTVV+ + K +YP GY +   P  A+A   +  D Q+     T
Sbjct:    8 DSTRMIFFESVTWTDEFNVSFTETGFTHVPGGEEYAKQSVFSFHYYSLPNVGELDNYFYERVHDAYSWKCAAFLTEFDISNEQMSPETFDKQSRVMDECDNYKISWIGWEYKPLAGSLPNGTCTGCGYGIFLPNGTVNEMVAKVVSRTFAQFVSGNVQLIQFDKGTAVFKLNFFLNTT-ITQPTVVYANLKYWYPQGYDLTYSPTQAIASVTTSTDGQYTQLFNT 231          
BLAST of mRNA_M-pyrifera_M_contig89810.20816.1 vs. uniprot
Match: A0A7S1INX7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1INX7_9EUGL)

HSP 1 Score: 159 bits (403), Expect = 3.220e-42
Identity = 92/259 (35.52%), Postives = 133/259 (51.35%), Query Frame = 1
Query:    1 PFLLLPGIPDRHNLQPLYDEAALAIAAVDPDRVVLFESITWDDMFGWWLLSTGFTHAPGGAGRAAQSALAFHYYSQPNFGDK--RAYLKRRVEDAAALNVGALVTEFDLGSSESSA---DTMDALDELLVGWTAWEYKPYAGSLANGTCTGCGSGPWHRDGTLDAGVVRVLARTYAPAVAGDVMAMKFDRSTSEFQLRFAATAPDASAPTVVFLSPKVFYPGGYKVEVEPAGALAWSKADDQHLHFVTTASAEGAEVTI 762
            P LL+P + DR NLQP YD  A A+  VDPD ++LF S+TWDD      +  GF H PGG     +S L++HYY  P F      A +KR   D   L  G ++TEFD+G++        T+ +LD  L  W  WEYKP+ G       TG  +  W+ DGT +  +  +L+RT+AP VAG  +   FD S+  + L +          T+++L+ +  YP GY V+  P   + W+      +    +    GAEVT+
Sbjct:  242 PTLLVPCVADRVNLQPAYDYLASALRMVDPDHIILFMSVTWDD------ICIGFDHVPGGPQWQHKSILSYHYYRPPQFSLDLAMAIIKR---DQQRLGCGGMMTEFDVGNTGDVGAINGTLTSLDSNLQSWIGWEYKPFRGPK-----TGYNNCLWNADGTPNHSLRAILSRTFAPVVAGTALGWSFDPSSGRYALEYVVNPYVTRNETIIYLNRRYHYPTGYSVKCTPQPQVKWAPKGPDRITVSHSGLPAGAEVTV 486          
BLAST of mRNA_M-pyrifera_M_contig89810.20816.1 vs. uniprot
Match: A0A0D2WWM1_CAPO3 (Endoglycoceramidase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WWM1_CAPO3)

HSP 1 Score: 160 bits (404), Expect = 4.160e-42
Identity = 93/262 (35.50%), Postives = 134/262 (51.15%), Query Frame = 1
Query:    1 PFLLLPGIPDRHNLQPLYDEAALAIAAVDPDRVVLFESITWDDMFGWWLLSTGFTHAPGGAGRAAQSALAFHYYSQPNFGDKRAYLKRRVEDAAALNVGALVTEFDLGSSESS------ADTMDALDELLVGWTAWEYKPYAGSLANGTCTGCGSGPWHRDGTLDAGVVRVLARTYAPAVAGDVMAMKFDRSTSEFQLRFAATAPDASAPTVVFLSPKVFYPGGYKVEVEPAGALAWSKADDQHLHFVTTASAEGAEVTITI 768
            P L++PG+ DR NLQP YD     I A DPD ++ FES TWDD      +  GF HAPGGA  A +S ++FHYY  PN      +  R   DA  L  G  +TEF++  S S+        TMD  D+    W  WEYK Y         TG G+  W  +GT +  +++VLAR+Y  AVAG   +  F  +T+ F L +       + PT +F++  V Y  GY V++ PA  +  + + +       ++S+ G  VT+ +
Sbjct:  278 PELMVPGVADRRNLQPFYDNLNSVIRAQDPDCLIWFESTTWDDF-----VPMGFEHAPGGAAFANRSVVSFHYYYPPNVSPAEQFFSRAT-DARHLGTGMALTEFNIDPSASTDASTKMTTTMDVADQYFSSWIGWEYKQYI------PMTGYGNSIWFANGTYNWPLIKVLARSYPHAVAGTTTSFHFAAATAVFVLEYTVDTT-CTLPTDIFVAESVHYVNGYTVDITPANVVKMTSSTNHIFLSPVSSSSNGKFVTVVV 526          
BLAST of mRNA_M-pyrifera_M_contig89810.20816.1 vs. uniprot
Match: A0A1X7VLM5_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VLM5_AMPQE)

HSP 1 Score: 158 bits (399), Expect = 1.200e-41
Identity = 88/259 (33.98%), Postives = 137/259 (52.90%), Query Frame = 1
Query:    1 PFLLLPGIPDRHNLQPLYDEAALAIAAVDPDRVVLFESITWDDMFGWWLLSTGFTHAPGGAGRAAQSALAFHYYSQPNFGDKRAYLKRRVEDAAALNVGALVTEFDLGSSESSADTMDALDELLVGWTAWEYKPYAGSLANGTCTGCGSGPWHRDGTLDAGVVRVLARTYAPAVAGDVMAMKFDRSTSEFQLRFAATAPDASAPTVVFLSPKVFYPGGYKVEVEPAGALAWSKADDQHLHFVTTASAEGAEVTITITKQ 777
            P L  P + D+ NL  +YD  + AI  VDP   V FES+TWD+    W  + GF   PGG G   +S L++H+Y  P+  +       R++D   L  G  +TEF + SS  S + MD  ++ L  W AW++KPY         TG     W  +G+++A V  +++RTYA AVAG  ++MK+D  TS F L +  T    S  T ++L+    YPGG++V + P+ A  W+K D  ++     +   G  + +T+ ++
Sbjct:  246 PLLAWPQVADKKNLAHVYDTLSTAIWNVDPCHNVFFESVTWDE----W--TVGFEAVPGGKGNEHRSVLSYHFYIPPDI-EASVSFDYRMKDLKRLQCGGFLTEFSITSSNPS-NVMDEANKHLQSWMAWDFKPYY------DITGDSGSIWFSNGSINANVTALISRTYAQAVAGKTISMKYDSKTSTFVLSYVVTESCTSTITEIYLNEAQHYPGGFEVTISPSDAATWNKEDTNYITVTHKSVPAGMIIQVTVARK 490          
BLAST of mRNA_M-pyrifera_M_contig89810.20816.1 vs. uniprot
Match: A0A0D2WQU2_CAPO3 (Endoglycoceramidase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WQU2_CAPO3)

HSP 1 Score: 137 bits (344), Expect = 1.100e-33
Identity = 89/263 (33.84%), Postives = 126/263 (47.91%), Query Frame = 1
Query:    1 PFLLLPGIPDRHNLQPLYDEAALAIAAVDPDRVVLFESITWDDMFGWWLLSTGFTHAPGGAGRAAQSALAFHYYSQPNFGDKRAYLKRRVEDAAALNVGALVTEFDLGSS------ESSADTMDALDELLVGWTAWEYKPYAGSLANGTCTGCGSGPWHRDGTLDAGVVRVLARTYAPAVAGDVMAMKFDRSTSEFQLRFAATAPDASAPTVVFLSPKVFYPGGYKVEVEPAGALAWSKADDQHLHFVTTASAE-GAEVTITI 768
            P L++P + DR NLQP YD  +  I   DP+ ++ FES+TWDD      +  GF H PGG   + QS ++ HYY  PN      +  R   DA        +TEF +  S      E  + TMDA D+  + W  W+YK +  +    +        W  +GT +  VV  +ARTY  AVAG      +D +T  F L +   A     PT +FL+  V Y  GY V V P+  +  S   + H++   T+SA  G  VT+ I
Sbjct:  251 PELMIPSVADRVNLQPFYDNLSNVIREQDPNAIIWFESVTWDDF-----VPMGFEHPPGGFQYSNQSVISLHYYFGPNVSPMNQFAAR-YSDAERYGTSLALTEFLIDPSDTPSALEHMSKTMDAADKYQMSWFGWDYKVFEDTTYGPSIW------WPTNGTYNWPVVETVARTYPQAVAGKTFHYSYDVATRIFILEYYVNAA-CKLPTDIFLAEDVHYQNGYTVSVNPSNVVTQSSIKN-HVYLTPTSSASNGKFVTVVI 499          
BLAST of mRNA_M-pyrifera_M_contig89810.20816.1 vs. uniprot
Match: A0A0L0HTF9_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HTF9_SPIPD)

HSP 1 Score: 136 bits (343), Expect = 1.600e-33
Identity = 93/270 (34.44%), Postives = 132/270 (48.89%), Query Frame = 1
Query:    1 PFLLLPGIPDRHNLQPLYDEAALAIAAVDPDRVVLFESITWDDMFGWWLLSTGFTHAPGGAGRAAQSALAFHYYSQPNFGDKRAYLKRRVEDAAALNVGALVTEFDLG-----SSESSADTMDALDELLVGWTAWEYKPYAGSLANGTCTGCGSGPWHRD-GTLDAGVVRVLARTYAPAVAGDVMAMKFDRSTSEFQLRFAATAPDASAPTVVFLSPKVFYPGGYKVEVEPAGA-----LAWSKADDQHLHFVTTASAE-GAEVTITITK 774
            P LL+PG+ DR NLQ  YD  A AI +VDP+ ++ FES+TWD+         GFTHAPGG   A++S L+FH+Y  P   +  A    R  D   L  G ++TEF++G     + E   D     D+    +T WEY  Y         TG  +G    + G +   +  V +RTYA A+AG  ++M FD  T  F L F +       PT + ++    YP GY   V+ A A          A D  +H V       GA+VT+T+++
Sbjct:  251 PGLLVPGVADRMNLQNFYDVIATAIRSVDPNAMIFFESVTWDNFV------VGFTHAPGGTQYASKSVLSFHHYQPPQLFNLNATFVERSLDMLRLQSGGMLTEFEMGWKNGGNIEYIRDVSRLADKYFFSYTGWEYTDYI------PITGTNNGIRDPETGLVRPDMAEVYSRTYATAIAGIPLSMSFDDKTGLFTLTFVSDG--TIHPTEIRVNSPRHYPSGYSAAVQSASAGFRVLQPNEGAKDGFIHVVREQPGRPGAKVTVTVSR 506          
BLAST of mRNA_M-pyrifera_M_contig89810.20816.1 vs. uniprot
Match: S8A8I2_DACHA (Ricin B-type lectin domain-containing protein n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8A8I2_DACHA)

HSP 1 Score: 128 bits (322), Expect = 2.700e-30
Identity = 78/252 (30.95%), Postives = 128/252 (50.79%), Query Frame = 1
Query:    1 PFLLLPGIPDRHNLQPLYDEAALAIAAVDPDRVVLFESITWDDMFGWWLLSTGFTHAPGGAGRAAQSALAFHYYSQPNFGDKRAYLKRRVEDAAALNVGALVTEF-----DLGSSESSADTMDALDELLVGWTAWEYKPYAGSLANGTCTGCGSGPWHRDGTLDAGVVRVLARTYAPAVAGDVMAMKFDRSTSEFQLRFAATAPDASAPTVVFLSPKVFYPGGYKVEVEPAGALAWSKADDQ--HLHFVTTA 735
            P LL+PG+ DR +++PL+++   AI  VD   +V+FE  T+D       + +GF + PGG G  +++A ++HYY+ P  G     +K R++DA  L     ++EF     D G+  +S +T    D+ L  WTAW Y+                  + R G  D  +  + ARTYA A AG      F+ +T ++ + + A     +APT++ +SPK +YP G +V   P  A+ W+  ++    LH+   A
Sbjct:  197 PLLLVPGVGDRESMEPLWNKGNTAIREVDDTTIVMFEGSTYD-------ILSGFNNVPGGDG--SKTAHSYHYYNPPQLGSIEDTIKNRIKDATRLRTTGFLSEFQLWGNDAGTRAASLETTRQADKYLQSWTAWAYEEV----------------FDRTGAPDPKLALIYARTYAEATAGVTQTSYFEDATGKYWVSWLAKT-FITAPTLIRISPKSYYPDGIRVISNPPDAITWNIENENVIQLHYTDKA 422          
BLAST of mRNA_M-pyrifera_M_contig89810.20816.1 vs. uniprot
Match: G1X9V6_ARTOA (Ricin B-type lectin domain-containing protein n=8 Tax=Orbiliaceae TaxID=47021 RepID=G1X9V6_ARTOA)

HSP 1 Score: 125 bits (313), Expect = 5.790e-29
Identity = 78/260 (30.00%), Postives = 129/260 (49.62%), Query Frame = 1
Query:    1 PFLLLPGIPDRHNLQPLYDEAALAIAAVDPDRVVLFESITWDDMFGWWLLSTGFTHAPGGAGRAAQSALAFHYYSQPNFGDKRAYLKRRVEDAAALNVGALVTEFDLGSSESSA--DTMDALDELLVGWTAWEYKPYAGSLANGTCTGCGSGPWHRDGTLDAGVVRVLARTYAPAVAGDVMAMKFDRSTSEFQLRFAATAPDASAPTVVFLSPKVFYPGGYKVEVEPAGALAWSKADDQ--HLHFVTTASAEGAEVTITI 768
            P LL+PG+ DR N++PL+++   AI  VD   +V+FE  T+D       +  GF + PGG G  +++A ++HYY  P        +K R++DA  L  G ++TEF++  S ++   + +   D+ L  WTAW Y+           T   S P+         + RV ART+  A AG   A  F+ ST  + + + A      AP ++ + PK +YP G ++  EP   + W   ++    LH+ T  +  G  +T ++
Sbjct:  244 PLLLIPGVADRENMEPLWNKGNDAIRQVDDTTIVMFEGSTYD-------ILAGFNNVPGGDG--SKTAHSYHYYKPPQISGIETTIKNRIKDATRLKTGGILTEFEMWGSNTAGPLEAVRVADKYLQSWTAWSYEELFDR------TNMTSVPYPH-------LARVHARTFVEATAGITKATYFEDSTGRYWVSWTANTA-IKAPGLIRIVPKSYYPDGIRIITEPPNVIKWKSENENVIQLHY-TDKAVNGQLITASV 479          
BLAST of mRNA_M-pyrifera_M_contig89810.20816.1 vs. uniprot
Match: F4QFS6_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QFS6_CAVFA)

HSP 1 Score: 117 bits (293), Expect = 1.230e-26
Identity = 75/260 (28.85%), Postives = 122/260 (46.92%), Query Frame = 1
Query:    1 PFLLLPGIPDRHNLQPLYDEAALAIAAVDPDRVVLFESITWDDMFGWWLLSTGFTHAPGGAGRAAQSALAFHYYSQPNFGDKRAYLKRRVEDAAALNVGALVTEF---DLGSSESSADTMDALDELLVGWTAWEYKPYAGSLANGTCTGCGSGPWHRDGTLDAGVVRVLARTYAPAVAGDVMAMKFDRSTSEFQLRFAATAPDASAPTVVFLSPKVFYPGGYKVEVEPAGALAWSKADDQHLHFVTTASAEGAEVTITIT 771
            P L++P   D+ NL P+Y+  +  I ++DPD ++ FES+TWD+         GF   PGG      S L++HYY  P+F  K   +  R+ D   L     +TEF    +G  ++    ++  D  L  W  W Y     SL N             +G  +   +++ +RTY   V+G   +M F+ ++ EF + +    P+   PT ++L+  V YP GY   V P+  +  +      L  +T  + +  +VTITIT
Sbjct:  239 PLLMVPETADKINLAPMYERLSKDIRSIDPDHIIFFESVTWDEY------GVGFDTVPGGNDWRNLSTLSYHYYVPPDFSIKE-IMWARMRDLEKLGTAGFLTEFGGPQVGDPQAMIQVLEETDLNLQSWMLWVYD----SLFND------------NGEPNPEQIKIFSRTYPQYVSGTTKSMSFNTTSGEFSMVYTMN-PNIQEPTEIYLNENVHYPNGYTFTVSPSKDVVIASTQTNRL-LLTNNNNQPIDVTITIT 473          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89810.20816.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6B2L361_9EUKA3.600e-5240.24Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
X6N759_RETFI1.970e-5041.33Glycosyl hydrolase family protein n=1 Tax=Reticulo... [more]
A0A7S1INX7_9EUGL3.220e-4235.52Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A0D2WWM1_CAPO34.160e-4235.50Endoglycoceramidase n=2 Tax=Capsaspora owczarzaki ... [more]
A0A1X7VLM5_AMPQE1.200e-4133.98Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A0D2WQU2_CAPO31.100e-3333.84Endoglycoceramidase n=1 Tax=Capsaspora owczarzaki ... [more]
A0A0L0HTF9_SPIPD1.600e-3334.44Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
S8A8I2_DACHA2.700e-3030.95Ricin B-type lectin domain-containing protein n=1 ... [more]
G1X9V6_ARTOA5.790e-2930.00Ricin B-type lectin domain-containing protein n=8 ... [more]
F4QFS6_CAVFA1.230e-2628.85Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89810contigM-pyrifera_M_contig89810:19..798 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score162.5
Seed ortholog evalue2.6e-37
Seed eggNOG ortholog192875.XP_004343119.1
KEGG koko:K05991
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Cellulase (glycosyl hydrolase family 5)
EggNOG OGs29IWV@1,2RS4Q@2759,39YCX@33154
EC3.2.1.123
COG Functional cat.G
CAZyGH5
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size780
Cds size780
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816808.9134254-CDS-M-pyrifera_M_contig89810:18..7981622816808.9134254-CDS-M-pyrifera_M_contig89810:18..798Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89810 19..798 -
1692278191.0957944-CDS-M-pyrifera_M_contig89810:18..7981692278191.0957944-CDS-M-pyrifera_M_contig89810:18..798Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89810 19..798 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89810.20816.1prot_M-pyrifera_M_contig89810.20816.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89810 19..798 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89810.20816.1

>prot_M-pyrifera_M_contig89810.20816.1 ID=prot_M-pyrifera_M_contig89810.20816.1|Name=mRNA_M-pyrifera_M_contig89810.20816.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=260bp
PFLLLPGIPDRHNLQPLYDEAALAIAAVDPDRVVLFESITWDDMFGWWLL
STGFTHAPGGAGRAAQSALAFHYYSQPNFGDKRAYLKRRVEDAAALNVGA
LVTEFDLGSSESSADTMDALDELLVGWTAWEYKPYAGSLANGTCTGCGSG
PWHRDGTLDAGVVRVLARTYAPAVAGDVMAMKFDRSTSEFQLRFAATAPD
ASAPTVVFLSPKVFYPGGYKVEVEPAGALAWSKADDQHLHFVTTASAEGA
EVTITITKQ*
back to top

mRNA from alignment at M-pyrifera_M_contig89810:19..798-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89810.20816.1 ID=mRNA_M-pyrifera_M_contig89810.20816.1|Name=mRNA_M-pyrifera_M_contig89810.20816.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig89810:19..798- (Macrocystis pyrifera P11B4 male)
CCGTTCCTGCTGCTTCCAGGCATCCCGGATCGCCACAACCTGCAGCCGCT GTACGACGAGGCGGCACTCGCCATTGCGGCCGTCGACCCTGACCGGGTGG TGCTGTTCGAGAGCATCACCTGGGACGACATGTTCGGCTGGTGGCTGCTC TCCACCGGGTTCACCCACGCGCCGGGGGGTGCTGGTCGCGCAGCGCAGTC GGCGCTTGCGTTCCACTACTACTCGCAGCCGAACTTTGGCGACAAACGAG CGTACCTGAAGCGACGCGTGGAGGACGCGGCGGCGCTCAACGTCGGCGCC CTCGTCACCGAGTTCGACCTGGGCTCGTCAGAGAGCTCCGCCGACACCAT GGACGCGCTGGACGAGCTGCTGGTCGGGTGGACCGCGTGGGAGTACAAGC CGTACGCTGGGAGCTTGGCCAACGGCACCTGCACCGGCTGTGGCTCCGGC CCGTGGCACCGCGACGGCACGCTGGACGCCGGCGTGGTGCGGGTGTTGGC GCGCACGTACGCGCCCGCGGTGGCTGGCGATGTGATGGCGATGAAGTTTG ACCGGAGCACCTCGGAGTTTCAGCTGCGATTTGCGGCTACAGCGCCCGAC GCGAGCGCGCCCACCGTCGTGTTCCTCAGCCCAAAGGTGTTCTACCCGGG CGGGTACAAGGTGGAAGTGGAGCCGGCTGGTGCGCTTGCGTGGAGTAAGG CGGACGACCAGCATCTGCACTTTGTGACGACGGCATCGGCTGAAGGCGCC GAGGTCACAATCACCATCACCAAGCAGTAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig89810:19..798-

>mRNA_M-pyrifera_M_contig89810.20816.1 ID=mRNA_M-pyrifera_M_contig89810.20816.1|Name=mRNA_M-pyrifera_M_contig89810.20816.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1560bp|location=Sequence derived from alignment at M-pyrifera_M_contig89810:19..798- (Macrocystis pyrifera P11B4 male)
CCGTTCCTGCTGCTTCCAGGCATCCCGGATCGCCACAACCTGCAGCCGCT
GTACGACGAGGCGGCACTCGCCATTGCGGCCGTCGACCCTGACCGGGTGG
TGCTGTTCGAGAGCATCACCTGGGACGACATGTTCGGCTGGTGGCTGCTC
TCCACCGGGTTCACCCACGCGCCGGGGGGTGCTGGTCGCGCAGCGCAGTC
GGCGCTTGCGTTCCACTACTACTCGCAGCCGAACTTTGGCGACAAACGAG
CGTACCTGAAGCGACGCGTGGAGGACGCGGCGGCGCTCAACGTCGGCGCC
CTCGTCACCGAGTTCGACCTGGGCTCGTCAGAGAGCTCCGCCGACACCAT
GGACGCGCTGGACGAGCTGCTGGTCGGGTGGACCGCGTGGGAGTACAAGC
CGTACGCTGGGAGCTTGGCCAACGGCACCTGCACCGGCTGTGGCTCCGGC
CCGTGGCACCGCGACGGCACGCTGGACGCCGGCGTGGTGCGGGTGTTGGC
GCGCACGTACGCGCCCGCGGTGGCTGGCGATGTGATGGCGATGAAGTTTG
ACCGGAGCACCTCGGAGTTTCAGCTGCGATTTGCGGCTACAGCGCCCGAC
GCGAGCGCGCCCACCGTCGTGTTCCTCAGCCCAAAGGTGTTCTACCCGGG
CGGGTACAAGGTGGAAGTGGAGCCGGCTGGTGCGCTTGCGTGGAGTAAGG
CGGACGACCAGCATCTGCACTTTGTGACGACGGCATCGGCTGAAGGCGCC
GAGGTCACAATCACCATCACCAAGCAGTAGCCGTTCCTGCTGCTTCCAGG
CATCCCGGATCGCCACAACCTGCAGCCGCTGTACGACGAGGCGGCACTCG
CCATTGCGGCCGTCGACCCTGACCGGGTGGTGCTGTTCGAGAGCATCACC
TGGGACGACATGTTCGGCTGGTGGCTGCTCTCCACCGGGTTCACCCACGC
GCCGGGGGGTGCTGGTCGCGCAGCGCAGTCGGCGCTTGCGTTCCACTACT
ACTCGCAGCCGAACTTTGGCGACAAACGAGCGTACCTGAAGCGACGCGTG
GAGGACGCGGCGGCGCTCAACGTCGGCGCCCTCGTCACCGAGTTCGACCT
GGGCTCGTCAGAGAGCTCCGCCGACACCATGGACGCGCTGGACGAGCTGC
TGGTCGGGTGGACCGCGTGGGAGTACAAGCCGTACGCTGGGAGCTTGGCC
AACGGCACCTGCACCGGCTGTGGCTCCGGCCCGTGGCACCGCGACGGCAC
GCTGGACGCCGGCGTGGTGCGGGTGTTGGCGCGCACGTACGCGCCCGCGG
TGGCTGGCGATGTGATGGCGATGAAGTTTGACCGGAGCACCTCGGAGTTT
CAGCTGCGATTTGCGGCTACAGCGCCCGACGCGAGCGCGCCCACCGTCGT
GTTCCTCAGCCCAAAGGTGTTCTACCCGGGCGGGTACAAGGTGGAAGTGG
AGCCGGCTGGTGCGCTTGCGTGGAGTAAGGCGGACGACCAGCATCTGCAC
TTTGTGACGACGGCATCGGCTGAAGGCGCCGAGGTCACAATCACCATCAC
CAAGCAGTAG
back to top