mRNA_M-pyrifera_M_contig109959.2081.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109959.2081.1 vs. uniprot
Match: A0A8D1BYR1_PIG (Nucleolar complex protein 2 homolog n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1BYR1_PIG) HSP 1 Score: 73.9 bits (180), Expect = 4.750e-12 Identity = 53/185 (28.65%), Postives = 90/185 (48.65%), Query Frame = 1
Query: 1 VVSWQFVNALRAWTAVLLSLGSSPSAPLFPLVFPLLQTILAAVSHRPSLRFVPFRTHLLQLAVQLLWGASLHTPLLPHLLHSLRTLQAARRSATDTRTQARREFPLLLRFSEADVHSVELLDAAHAQTCATALDALKAHFFTLALPELAAPALVQLRKLAKDAPTPAHRQRVRAIVRAVDAQAQH 555
V +WQFV+ L W L ++G PS L PL++PL Q I+ + P+ RF P R H ++ L G P+LP +L + + RR + F ++L+ S+ + D Q L+ L + +++A PELA PA++QL+ ++ + ++VR ++ V A+H
Sbjct: 400 VYNWQFVHCLHLWCRALSTVG--PSEALQPLIYPLSQVIIGCIKLVPTARFYPLRMHCVRALTALSEGTGTFIPVLPFILEVFQQVDFNRRPGRMSSRPI--NFAVILKLSKGSLQEKAYRDGLVEQLYDLTLEYLHSQAYSIAFPELALPAVLQLKSFLRECKVANYCRQVRQLLEKVQENAEH 580
BLAST of mRNA_M-pyrifera_M_contig109959.2081.1 vs. uniprot
Match: A0A8D1LAH1_PIG (Nucleolar complex protein 2 homolog n=5 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1LAH1_PIG) HSP 1 Score: 73.6 bits (179), Expect = 6.310e-12 Identity = 53/185 (28.65%), Postives = 90/185 (48.65%), Query Frame = 1
Query: 1 VVSWQFVNALRAWTAVLLSLGSSPSAPLFPLVFPLLQTILAAVSHRPSLRFVPFRTHLLQLAVQLLWGASLHTPLLPHLLHSLRTLQAARRSATDTRTQARREFPLLLRFSEADVHSVELLDAAHAQTCATALDALKAHFFTLALPELAAPALVQLRKLAKDAPTPAHRQRVRAIVRAVDAQAQH 555
V +WQFV+ L W L ++G PS L PL++PL Q I+ + P+ RF P R H ++ L G P+LP +L + + RR + F ++L+ S+ + D Q L+ L + +++A PELA PA++QL+ ++ + ++VR ++ V A+H
Sbjct: 401 VYNWQFVHCLHLWCRALSTVG--PSEALQPLIYPLSQVIIGCIKLVPTARFYPLRMHCVRALTLLSEGTGTFIPVLPFILEVFQQVDFNRRPGRMSSRPI--NFAVILKLSKGSLQEKAYRDGLVEQLYDLTLEYLHSQAYSIAFPELALPAVLQLKSFLRECKVANYCRQVRQLLEKVQENAEH 581
BLAST of mRNA_M-pyrifera_M_contig109959.2081.1 vs. uniprot
Match: A0A8D1WW22_PIG (Nucleolar complex protein 2 homolog n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1WW22_PIG) HSP 1 Score: 73.6 bits (179), Expect = 6.340e-12 Identity = 53/185 (28.65%), Postives = 90/185 (48.65%), Query Frame = 1
Query: 1 VVSWQFVNALRAWTAVLLSLGSSPSAPLFPLVFPLLQTILAAVSHRPSLRFVPFRTHLLQLAVQLLWGASLHTPLLPHLLHSLRTLQAARRSATDTRTQARREFPLLLRFSEADVHSVELLDAAHAQTCATALDALKAHFFTLALPELAAPALVQLRKLAKDAPTPAHRQRVRAIVRAVDAQAQH 555
V +WQFV+ L W L ++G PS L PL++PL Q I+ + P+ RF P R H ++ L G P+LP +L + + RR + F ++L+ S+ + D Q L+ L + +++A PELA PA++QL+ ++ + ++VR ++ V A+H
Sbjct: 400 VYNWQFVHCLHLWCRALSTVG--PSEALQPLIYPLSQVIIGCIKLVPTARFYPLRMHCVRALTLLSEGTGTFIPVLPFILEVFQQVDFNRRPGRMSSRPI--NFAVILKLSKGSLQEKAYRDGLVEQLYDLTLEYLHSQAYSIAFPELALPAVLQLKSFLRECKVANYCRQVRQLLEKVQENAEH 580
BLAST of mRNA_M-pyrifera_M_contig109959.2081.1 vs. uniprot
Match: A0A4X1W9E5_PIG (Nucleolar complex protein 2 homolog n=34 Tax=Suidae TaxID=9821 RepID=A0A4X1W9E5_PIG) HSP 1 Score: 73.6 bits (179), Expect = 6.400e-12 Identity = 53/185 (28.65%), Postives = 90/185 (48.65%), Query Frame = 1
Query: 1 VVSWQFVNALRAWTAVLLSLGSSPSAPLFPLVFPLLQTILAAVSHRPSLRFVPFRTHLLQLAVQLLWGASLHTPLLPHLLHSLRTLQAARRSATDTRTQARREFPLLLRFSEADVHSVELLDAAHAQTCATALDALKAHFFTLALPELAAPALVQLRKLAKDAPTPAHRQRVRAIVRAVDAQAQH 555
V +WQFV+ L W L ++G PS L PL++PL Q I+ + P+ RF P R H ++ L G P+LP +L + + RR + F ++L+ S+ + D Q L+ L + +++A PELA PA++QL+ ++ + ++VR ++ V A+H
Sbjct: 401 VYNWQFVHCLHLWCRALSTVG--PSEALQPLIYPLSQVIIGCIKLVPTARFYPLRMHCVRALTLLSEGTGTFIPVLPFILEVFQQVDFNRRPGRMSSRPI--NFAVILKLSKGSLQEKAYRDGLVEQLYDLTLEYLHSQAYSIAFPELALPAVLQLKSFLRECKVANYCRQVRQLLEKVQENAEH 581
BLAST of mRNA_M-pyrifera_M_contig109959.2081.1 vs. uniprot
Match: UPI00032B0EB0 (LOW QUALITY PROTEIN: nucleolar complex protein 2 homolog n=4 Tax=Ochotona TaxID=9977 RepID=UPI00032B0EB0) HSP 1 Score: 71.2 bits (173), Expect = 4.040e-11 Identity = 52/185 (28.11%), Postives = 89/185 (48.11%), Query Frame = 1
Query: 1 VVSWQFVNALRAWTAVLLSLGSSPSAPLFPLVFPLLQTILAAVSHRPSLRFVPFRTHLLQLAVQLLWGASLHTPLLPHLLHSLRTLQAARRSATDTRTQARREFPLLLRFSEADVHSVELLDAAHAQTCATALDALKAHFFTLALPELAAPALVQLRKLAKDAPTPAHRQRVRAIVRAVDAQAQH 555
V +WQ+V+ L W VL S G P L PLV+PL Q I+ + P+ RF P R H ++ L P+LP +L + + ++ + F ++L+ S ++ D Q C L+ L+ H ++A PELA PA++QL+ ++ + ++VR ++ + A+H
Sbjct: 411 VYNWQYVHCLYLWCRVLSSEG--PRDALQPLVYPLAQVIIGCIKLVPTARFYPLRIHCVRALTLLSESVGSFIPVLPFILEVFQQVDFNKKPGRMSSKPI--NFSVILKLSSVNLQEKAYRDGLVEQLCDLTLEHLQGHAHSIAFPELALPAVLQLKSFLRECKVANYCRQVRQLLEKLQENAEH 591
BLAST of mRNA_M-pyrifera_M_contig109959.2081.1 vs. uniprot
Match: G1PAM9_MYOLU (Nucleolar complex protein 2 homolog n=5 Tax=Myotis TaxID=9434 RepID=G1PAM9_MYOLU) HSP 1 Score: 70.5 bits (171), Expect = 7.320e-11 Identity = 51/185 (27.57%), Postives = 91/185 (49.19%), Query Frame = 1
Query: 1 VVSWQFVNALRAWTAVLLSLGSSPSAPLFPLVFPLLQTILAAVSHRPSLRFVPFRTHLLQLAVQLLWGASLHTPLLPHLLHSLRTLQAARRSATDTRTQARREFPLLLRFSEADVHSVELLDAAHAQTCATALDALKAHFFTLALPELAAPALVQLRKLAKDAPTPAHRQRVRAIVRAVDAQAQH 555
V +WQF++ L+ W VL ++ PS L PL++PL Q +L + P+ RF P R H +++ L G P+LP +L + + R+ + F ++L+ S+ ++ D Q L+ L + ++A PELA PA++QL+ ++ + ++VR ++ V A H
Sbjct: 351 VYNWQFMHCLQLWCRVLSTI--CPSDTLQPLIYPLAQVVLGCIKLVPTARFYPLRMHCVRILTLLSEGTGTFIPVLPFILEVFQQVDFNRKPGRMSSKPI--NFAVILKLSKVNLQEKAYRDGLVEQLYDLTLEYLHSQAHSIAFPELALPAILQLKSFLRECKVANYCRQVRQLLEKVQENADH 531
BLAST of mRNA_M-pyrifera_M_contig109959.2081.1 vs. uniprot
Match: A0A7J7QWH5_MYOMY (Nucleolar complex protein 2 homolog n=9 Tax=Vespertilionidae TaxID=9431 RepID=A0A7J7QWH5_MYOMY) HSP 1 Score: 70.5 bits (171), Expect = 7.420e-11 Identity = 51/185 (27.57%), Postives = 91/185 (49.19%), Query Frame = 1
Query: 1 VVSWQFVNALRAWTAVLLSLGSSPSAPLFPLVFPLLQTILAAVSHRPSLRFVPFRTHLLQLAVQLLWGASLHTPLLPHLLHSLRTLQAARRSATDTRTQARREFPLLLRFSEADVHSVELLDAAHAQTCATALDALKAHFFTLALPELAAPALVQLRKLAKDAPTPAHRQRVRAIVRAVDAQAQH 555
V +WQF++ L+ W VL ++ PS L PL++PL Q +L + P+ RF P R H +++ L G P+LP +L + + R+ + F ++L+ S+ ++ D Q L+ L + ++A PELA PA++QL+ ++ + ++VR ++ V A H
Sbjct: 400 VYNWQFMHCLQLWCRVLSTI--CPSDTLQPLIYPLAQVVLGCIKLVPTARFYPLRMHCVRILTLLSEGTGTFIPVLPFILEVFQQVDFNRKPGRMSSKPI--NFAVILKLSKVNLQEKAYRDGLVEQLYDLTLEYLHSQAHSIAFPELALPAILQLKSFLRECKVANYCRQVRQLLEKVQENADH 580
BLAST of mRNA_M-pyrifera_M_contig109959.2081.1 vs. uniprot
Match: A0A4P9YSC4_9FUNG (Noc2-domain-containing protein (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YSC4_9FUNG) HSP 1 Score: 68.9 bits (167), Expect = 1.250e-10 Identity = 46/167 (27.54%), Postives = 82/167 (49.10%), Query Frame = 1
Query: 1 VVSWQFVNALRAWTAVLLSLGSSP------SAPLFPLVFPLLQTILAAVSHRPSLRFVPFRTHLLQLAVQLLWGASLHTPLLPHLLHSLRTLQAARRSATDTRTQARREFPLLLRFSEADVHSVELLDAAHAQTCATALDALKAHFFTLALPELAAPALVQLRKLAK 483
V +WQF++ LR W+ VL + S S+PL P+++P +Q L A P+ ++ P R H + + QL PL+P + L + + R+ T + +L++ + +H+ + + C D + H ++A PELA PA+VQ+R++ K
Sbjct: 52 VYNWQFIHCLRLWSQVLSTYCSERFCAAHGSSPLQPIIYPFVQVALGASRLIPTAQYFPLRLHCVDMLTQLGRSTDTFIPLVPVIFEMLESTELRRKPTPSTLKPL--DLSVLIKAPKEYLHTRVYQEVLMERACECLFDYYEGHALSIAFPELAIPAIVQIRRMNK 216
BLAST of mRNA_M-pyrifera_M_contig109959.2081.1 vs. uniprot
Match: A0A4Y2STT5_ARAVE (Nucleolar complex protein 2 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2STT5_ARAVE) HSP 1 Score: 68.9 bits (167), Expect = 1.710e-10 Identity = 43/180 (23.89%), Postives = 96/180 (53.33%), Query Frame = 1
Query: 1 VVSWQFVNALRAWTAVLLSLGSSPSAPLFPLVFPLLQTILAAVSHRPSLRFVPFRTHLLQLAVQLLWGASLHTPLLPHLLHSLRTLQAARRSATDTRTQARREFPLLLRFSEADVHSVELLDAAHAQTCATALDALKAHFFTLALPELAAPALVQLRKLAKDAPTPAHRQRVRAIVRAVD 540
V +WQ+ + + W+ +L L PL L++PL+QT + V+ P+ +++P R HL++ + + + P+LP +L L+ + ++S + EF L+ +++ + DA ++ C+ ++ LK++ ++ PELA PA++Q++ K + Q+++A++ ++
Sbjct: 106 VYNWQYTHCILLWSYLLCRLVDHE--PLKSLIYPLVQTTIGTVNLIPTAKYIPLRFHLVKALMHISNSTGIFIPVLPFILDVLKIVDYNKKSNFSVKPV---EFSCALKVTKSQLLEAGFKDACISEVCSLLVEYLKSYSSSIGFPELALPAVLQIKSFIKQCKVSKYNQQLKAVLAKIE 280
BLAST of mRNA_M-pyrifera_M_contig109959.2081.1 vs. uniprot
Match: A0A210PTS5_MIZYE (Nucleolar complex protein 2 homolog n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PTS5_MIZYE) HSP 1 Score: 69.3 bits (168), Expect = 1.900e-10 Identity = 53/180 (29.44%), Postives = 88/180 (48.89%), Query Frame = 1
Query: 1 VVSWQFVNALRAWTAVLLSLGSSPSAPLFPLVFPLLQTILAAVSHRPSLRFVPFRTHLLQLAVQLLWGASLHTPLLPHLLHSLRTLQAARRSATDTRTQARREFPLLLRFSEADVHSVELLDAAHAQTCATALDALKAHFFTLALPELAAPALVQLRKLAKDAPTPAHRQRVRAIVRAVD 540
V +WQ+V++L W +L + + P+ L PL++PL QTI+ + P+ RF P R H ++L L S P+LP LL + ++ + F +L+FS++ + D Q LD L H ++ PELA PA++QL+ K + ++VR I+ V+
Sbjct: 464 VYNWQYVHSLGLWVRLLSA--THPNPVLEPLIYPLTQTIIGTIKLLPNSRFYPLRFHCVRLMTSLSQATSTFIPVLPFLLEIFEQIDFNKQHKKTSVKPF--NFACILKFSKSQLMERSFKDGLVDQLYELLLDQLNVHQSSVGFPELALPAILQLKDFLKKCKVANYCKQVRQILDKVE 639 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109959.2081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109959.2081.1 >prot_M-pyrifera_M_contig109959.2081.1 ID=prot_M-pyrifera_M_contig109959.2081.1|Name=mRNA_M-pyrifera_M_contig109959.2081.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp VVSWQFVNALRAWTAVLLSLGSSPSAPLFPLVFPLLQTILAAVSHRPSLRback to top mRNA from alignment at M-pyrifera_M_contig109959:2..556- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109959.2081.1 ID=mRNA_M-pyrifera_M_contig109959.2081.1|Name=mRNA_M-pyrifera_M_contig109959.2081.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=555bp|location=Sequence derived from alignment at M-pyrifera_M_contig109959:2..556- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109959:2..556- >mRNA_M-pyrifera_M_contig109959.2081.1 ID=mRNA_M-pyrifera_M_contig109959.2081.1|Name=mRNA_M-pyrifera_M_contig109959.2081.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig109959:2..556- (Macrocystis pyrifera P11B4 male)back to top |