prot_M-pyrifera_M_contig89766.20806.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig89766.20806.1
Unique Nameprot_M-pyrifera_M_contig89766.20806.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length115
Homology
BLAST of mRNA_M-pyrifera_M_contig89766.20806.1 vs. uniprot
Match: A0A7W1VWH1_9BACT (IPT/TIG domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A7W1VWH1_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 1.600e-6
Identity = 35/115 (30.43%), Postives = 60/115 (52.17%), Query Frame = 0
Query:    1 GQGTDLVVKVYIQGSWSNSVTYSYSPPIITRLTATEPAESGDPWTLHIVGSNFGVSNEVLVRPLVGGSPYTLLSTVSSSHTTIVVTLSEDEGEVSVQSGGQTSNSRIYSQASPII 115
            G GT   V V + G  S +++++Y+PP IT +  T    SG+   + + G++FG S  VL      G+P  + S   S    +V      +  +SV +GGQ SN ++++ +SP +
Sbjct:  411 GVGTGHTVSVSVGGQDSGALSFNYNPPFITDVFPTSAPTSGNT-LVTLTGASFGTSGTVLFN----GNPCAISSYTHSQIQFVVPPGQGMDNSISVVTGGQPSNMKLFNYSSPSV 520          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89766.20806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7W1VWH1_9BACT1.600e-630.43IPT/TIG domain-containing protein n=1 Tax=Verrucom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 25..108
e-value: 1.9E-6
score: 30.0
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 24..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89766contigM-pyrifera_M_contig89766:178..522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89766.20806.1mRNA_M-pyrifera_M_contig89766.20806.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig89766 178..522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig89766.20806.1 ID=prot_M-pyrifera_M_contig89766.20806.1|Name=mRNA_M-pyrifera_M_contig89766.20806.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp
GQGTDLVVKVYIQGSWSNSVTYSYSPPIITRLTATEPAESGDPWTLHIVG
SNFGVSNEVLVRPLVGGSPYTLLSTVSSSHTTIVVTLSEDEGEVSVQSGG
QTSNSRIYSQASPII
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR014756Ig_E-set