mRNA_M-pyrifera_M_contig100938.208.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100938.208.1 vs. uniprot
Match: A0A2E4WJ22_9BACT (Sodium:solute symporter n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E4WJ22_9BACT) HSP 1 Score: 102 bits (255), Expect = 8.220e-22 Identity = 62/199 (31.16%), Postives = 107/199 (53.77%), Query Frame = 1 Query: 19 NFVPHLIKNIQALSPFLFGIISLSVIAVLHMTAVLLLKLLSNLIALDLSNGSFFIAHFGQEKVRSTAHFLSALLCILLVFIT-LVLVINFPNAFPLVATLGIAFSFQIFPALIGVCYVPWLTGRSILIGLFAGIIVVFLTDQTNGAISRLLGYQLPFGSHPYSIYSGVWGALVNLMFVIFVSTITQSRNSLEQRAEFHH 612 N VP LI + SP+L G++++ +A + T + S ++ D+ + A LS L +++V I LV+ N +A ++ L +A+ FQ++P+LIG+CY PWLT + ++ GL AG+++V LTD+T+ + + LP+G++P +I+S WG N+ I VS +T + + E HH Sbjct: 338 NLVPQLINLLSNSSPWLVGLLAVCALAAMQSTGAAYMSTFSAMVTRDIYK------RYISPNATDNAQKLSGRLMVIVVAIAALVVAANSTSAIVMLGGLAVAYGFQMYPSLIGLCYFPWLTRKGVVAGLVAGLVIVTLTDRTS------IWFGLPWGAYPLTIHSAGWGIFFNITIAILVSKMTHESSDERNKREKHH 524
BLAST of mRNA_M-pyrifera_M_contig100938.208.1 vs. uniprot
Match: Q0AAW2_ALKEH (Na+/solute symporter n=2 Tax=Ectothiorhodospiraceae TaxID=72276 RepID=Q0AAW2_ALKEH) HSP 1 Score: 100 bits (248), Expect = 7.460e-21 Identity = 62/199 (31.16%), Postives = 105/199 (52.76%), Query Frame = 1 Query: 25 VPHLIKNIQALSPFLFGIISLSVIAVLHMTAVLLLKLLSNLIALDLSNGSFFIAHFGQEKVRSTAHFLSALLCILLVFITLVLVINFPNAFPLVATLGIAFSFQIFPALIGVCYVPWLTGRSILIGLFAGIIVVFLTDQTNGAISRLLGYQLPFGSHPYSIYSGVWGALVNLMFVIFVSTITQSRNSLEQRAEFHHFLE 621 VP +I ++ +P+L G++++ +A + T + +I D+ + E +T + +L+V LV +A L+ L +A+ FQ++PALIG+C+ PWLT + ++ GL G++VV LT+ + LG + +G P++++S WG L N+ I VS ITQ R LE R +HHFL+ Sbjct: 406 VPQMISLLEVGAPWLVGLLAVCALAAMQSTGAAYMSTSGGMITRDILR-----RYLIPEADHATQKLWGRVFVLLIVAAALVTATVATDALVLLGGLAVAYGFQMWPALIGLCFWPWLTRQGVVAGLIVGLVVVTLTENIGVQLLAALGLEW-WGRWPWTLHSAGWGILFNITTAILVSAITQDRGELEHRMVYHHFLQ 598
BLAST of mRNA_M-pyrifera_M_contig100938.208.1 vs. uniprot
Match: A0A6L7VZ31_9BACT (Sodium:solute symporter family protein n=4 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6L7VZ31_9BACT) HSP 1 Score: 99.0 bits (245), Expect = 1.800e-20 Identity = 59/198 (29.80%), Postives = 103/198 (52.02%), Query Frame = 1 Query: 19 NFVPHLIKNIQALSPFLFGIISLSVIAVLHMTAVLLLKLLSNLIALDLSNGSFFIAHFGQEKVRSTAHFLSALLCILLVFITLVLVINFPNAFPLVATLGIAFSFQIFPALIGVCYVPWLTGRSILIGLFAGIIVVFLTDQTNGAISRLLGYQLPFGSHPYSIYSGVWGALVNLMFVIFVSTITQSRNSLEQRAEFHH 612 N VP LI + +P+L G++++ +A + T + S ++ DL ++A + V+ + I++ + L++ F A ++ L +A+ FQ++PAL+GVCY PWLT + ++ GL AG+I V LTD+T + LP+G+ P +I+S WG NL+ + VS + ++ E HH Sbjct: 338 NLVPQLINLLTDSAPWLVGLLAVCALAAMQSTGAAYMSTFSGMVTRDLYKQ--YVAPDASDSVQKLC---GRIFVIVVTVVALLVAAQFTGAIVMLGGLAVAYGFQMYPALMGVCYFPWLTRKGVVWGLVAGLIAVTLTDRTVAV------FGLPWGAFPLTIHSAGWGIFANLIIALLVSKFGSENSGEREKREKHH 524
BLAST of mRNA_M-pyrifera_M_contig100938.208.1 vs. uniprot
Match: A0A7V5P160_9BACT (Sodium:solute symporter family protein n=1 Tax=Thermodesulfatator atlanticus TaxID=501497 RepID=A0A7V5P160_9BACT) HSP 1 Score: 97.1 bits (240), Expect = 8.520e-20 Identity = 69/202 (34.16%), Postives = 108/202 (53.47%), Query Frame = 1 Query: 25 VPHLIKNIQALSPFLFGIISLSVIAVLHMTAVLLLKLLSNLIALDLSNGSFFI----AHFGQEKVRSTAHFLSALLCILLVFITLVLVINFPNAFPLVATLGIAFSFQIFPALIGVCYVPWLTGRSILIGLFAGIIVVFLTDQTNGAISRLLGYQLPFGSHPYSIYSGVWGALVNLMFVIFVSTITQSRNSLEQRAEFHHFL 618 VP LI+ + +P+L GI+++ +A + T + S +I D+ FFI H Q+ + A FL A +L+ + +A L+ L +A+ FQ++PALIGVCY PWLT + +++GL AG+I V T+ + LG + +G P +I+S WG + NL I VS TQ R ++E + +FH FL Sbjct: 354 VPALIRLMADSAPWLVGILAVCALAAMQSTGSAYMSTASGMITRDVYR--FFINPDATHAQQKLIGRIAVFLIAGAALLVATYS-------KDALVLLGGLAVAYGFQMWPALIGVCYWPWLTRQGVILGLIAGLIAVTCTESIG---QKWLGIKA-WGRWPLTIHSAGWGIIFNLTIAIIVSAFTQDRKAMEHKLKFHAFL 542
BLAST of mRNA_M-pyrifera_M_contig100938.208.1 vs. uniprot
Match: A0A7S8HAQ4_9HYPH (Sodium:solute symporter family protein n=1 Tax=Kaustia mangrovi TaxID=2593653 RepID=A0A7S8HAQ4_9HYPH) HSP 1 Score: 96.7 bits (239), Expect = 1.160e-19 Identity = 58/199 (29.15%), Postives = 99/199 (49.75%), Query Frame = 1 Query: 25 VPHLIKNIQALSPFLFGIISLSVIAVLHMTAVLLLKLLSNLIALDLSNGSFFIAHFG-QEKVRSTAHFLSALLCILLVFITLVLVINFPNAFPLVATLGIAFSFQIFPALIGVCYVPWLTGRSILIGLFAGIIVVFLTDQTNGAISRLLGYQLPFGSHPYSIYSGVWGALVNLMFVIFVSTITQSRNSLEQRAEFHHFL 618 VP LI + +P L G +++ +A + T + ++ DL + HF + T + ++V L++ +A L+ L +AF FQ++PALI VCY PW T I +GLF GI+ V T+ +++ G +LP+G P++++S WG +NL + +S +TQ+ + R +H FL Sbjct: 359 VPALIDLLGTTAPVLVGFLAVCALAAMQSTGAAYMSTAGGMLTRDL------LKHFVLPDADHRTQKLWGRIGVAVIVIAALIVATTSQDALVLLGGLAVAFGFQMWPALIAVCYAPWFTRAGITVGLFLGILGVIFTESIGQSVAGWFGVELPWGRWPWTLHSAFWGLFLNLGAAMLISAVTQNADEFRHRMTYHDFL 551
BLAST of mRNA_M-pyrifera_M_contig100938.208.1 vs. uniprot
Match: A0A2E4JSC4_9ARCH (Sodium:solute symporter n=2 Tax=cellular organisms TaxID=131567 RepID=A0A2E4JSC4_9ARCH) HSP 1 Score: 95.9 bits (237), Expect = 2.110e-19 Identity = 61/202 (30.20%), Postives = 107/202 (52.97%), Query Frame = 1 Query: 19 NFVPHLIKNIQALSPFLFGIISLSVIAVLHMTAVLLLKLLSNLIALDLSNGSFFIAHFGQEKVRSTAHFLSALLCILLVFITLVLVINFPNAFPLVATLGIAFSFQIFPALIGVCYVPWLTGRSILIGLFAGIIVVFLTDQTNGAISRLLGYQLPFGSHPYSIYSGVWGALVNLMFVIFVSTIT-QSRNSLEQRAEFHHFLE 621 N VP LI I SP+L G++++ +A + T + S ++ D+ ++A + V+ + +L+ LV+ +A ++ L +A+ FQ++PAL+GVCY PW T + ++ GL AG++ V LTD+T+ + LP+G++P +I+S WG L NL + VS +T + E + + H FL+ Sbjct: 338 NLVPQLINLISDSSPWLMGLLTVCALAAMQSTGAAYMSTFSAMVTRDIYKR--YVAPGATDSVQKKV---GRITVVLVAGAALVVAAKSTSAIVMLGGLAVAYGFQMYPALMGVCYFPWFTRKGVVAGLVAGLVAVTLTDRTSA------WFGLPWGAYPLTIHSAGWGILFNLAIAVIVSKMTNKDPKEKEAKEKRHKFLQ 528
BLAST of mRNA_M-pyrifera_M_contig100938.208.1 vs. uniprot
Match: UPI0019D86792 (Sodium:solute symporter family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019D86792) HSP 1 Score: 92.4 bits (228), Expect = 2.170e-19 Identity = 48/125 (38.40%), Postives = 75/125 (60.00%), Query Frame = 1 Query: 244 ILLVFITLVLVINFPNAFPLVATLGIAFSFQIFPALIGVCYVPWLTGRSILIGLFAGIIVVFLTDQTNGAISRLLGYQLPFGSHPYSIYSGVWGALVNLMFVIFVSTITQSRNSLEQRAEFHHFL 618 +L+V L + +A L+ L +A+ FQ++PALI VC+ P+LT + +++GL AG+I V +T+ + ++G +G P +I+S WG + NL IFVS +TQ+R LE R FH FL Sbjct: 13 VLIVLAALAVATTAKDALVLLGGLAVAYGFQMWPALIAVCWWPFLTRQGVVLGLIAGLIAVTMTESLGAQVFAVIGIDPMWGRWPLTIHSAGWGIMFNLSIAIFVSAMTQNREDLEHRLTFHTFL 137
BLAST of mRNA_M-pyrifera_M_contig100938.208.1 vs. uniprot
Match: A0A6G7PUF3_9BACT (Sodium:solute symporter n=2 Tax=Thermodesulfobacteriaceae TaxID=188711 RepID=A0A6G7PUF3_9BACT) HSP 1 Score: 95.5 bits (236), Expect = 2.910e-19 Identity = 62/198 (31.31%), Postives = 104/198 (52.53%), Query Frame = 1 Query: 25 VPHLIKNIQALSPFLFGIISLSVIAVLHMTAVLLLKLLSNLIALDLSNGSFFIAHFGQEKVRSTAHFLSALLCILLVFITLVLVINFPNAFPLVATLGIAFSFQIFPALIGVCYVPWLTGRSILIGLFAGIIVVFLTDQTNGAISRLLGYQLPFGSHPYSIYSGVWGALVNLMFVIFVSTITQSRNSLEQRAEFHHFL 618 VP LI + +P+L G++++ +A + T + + +I DL + + + + + +++V L++ +A L+ L +A+ FQ++PALIG+CY PWLT + I++GL AG+I V T+ + LG + +G P +I+S WG + NL I VS TQ R E +A+FHHFL Sbjct: 354 VPALINIMADTAPWLVGLLAVCALAAMQSTGSAYMSTAAGMITRDL-----YRFYLRPDASHAEQKLFGRIAVLIVVGAALIVATTSKDALVLLGGLAVAYGFQMWPALIGICYWPWLTRQGIVLGLIAGLIAVTCTETIG---QKWLGIKA-WGRWPLTIHSAGWGIIFNLGIAIIVSAFTQDRKVQEHKAQFHHFL 542
BLAST of mRNA_M-pyrifera_M_contig100938.208.1 vs. uniprot
Match: A0A7C1XGJ7_9GAMM (Sodium:solute symporter family protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1XGJ7_9GAMM) HSP 1 Score: 94.7 bits (234), Expect = 5.280e-19 Identity = 61/199 (30.65%), Postives = 104/199 (52.26%), Query Frame = 1 Query: 25 VPHLIKNIQALSPFLFGIISLSVIAVLHMTAVLLLKLLSNLIALDLSNGSFFI-AHFGQEKVRSTAHFLSALLCILLVFITLVLVINFPNAFPLVATLGIAFSFQIFPALIGVCYVPWLTGRSILIGLFAGIIVVFLTDQTNGAISRLLGYQLPFGSHPYSIYSGVWGALVNLMFVIFVSTITQSRNSLEQRAEFHHFL 618 VP LI+ + +P+L G++S+ +A + T + ++ D+ A GQ+K F + + +V L++ + +A L+ L +A+ FQ++PALI VC+ PWLT + +++GL AG++ V LT++ +P+G P++I+S WG + NL I VS TQ + E R FH+FL Sbjct: 329 VPQLIRLMADAAPWLVGLLSVCALAAMQSTGAAYMSTAGGMLTRDILKRFVMPNASHGQQK------FWGRVGVVFIVLAALMVATHATDALVLLGGLAVAYGFQMWPALIAVCWWPWLTRQGVVLGLIAGLVAVTLTEKIGAQF-------MPWGRWPFTIHSAGWGIIFNLGIAILVSLFTQKQEETEHRMTFHNFL 514
BLAST of mRNA_M-pyrifera_M_contig100938.208.1 vs. uniprot
Match: A0A251XAU2_9GAMM (Sodium:solute symporter n=2 Tax=Thioflexithrix psekupsensis TaxID=1570016 RepID=A0A251XAU2_9GAMM) HSP 1 Score: 94.7 bits (234), Expect = 5.400e-19 Identity = 62/198 (31.31%), Postives = 99/198 (50.00%), Query Frame = 1 Query: 25 VPHLIKNIQALSPFLFGIISLSVIAVLHMTAVLLLKLLSNLIALDLSNGSFFIAHFGQEKVRSTAHFLSALLCILLVFITLVLVINFPNAFPLVATLGIAFSFQIFPALIGVCYVPWLTGRSILIGLFAGIIVVFLTDQTNGAISRLLGYQLPFGSHPYSIYSGVWGALVNLMFVIFVSTITQSRNSLEQRAEFHHFL 618 VP LI + +P+L G++S+ +A + T + ++ DL + + F + +++V LV+ +A L+ L +A+ FQ+FPALI +C+ P+LT ++IGL AG+I V +T+ ++ LG +G P +I+S WG L NL I VS +TQ LE R FH FL Sbjct: 359 VPALIHLMAGSAPWLVGLLSVCALAAMQSTGSAYMSTAGGMLTRDLLK-----RYLMPNATHAQQKFWGRIGVVVIVLAALVVATTATDALVLLGGLAVAYGFQMFPALIAICFWPFLTRAGVVIGLVAGLIAVTMTESIGMSLFAWLGIDPLWGRWPLTIHSAGWGILFNLTLAIGVSALTQDSKELEHRMTFHRFL 551 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100938.208.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100938.208.1 >prot_M-pyrifera_M_contig100938.208.1 ID=prot_M-pyrifera_M_contig100938.208.1|Name=mRNA_M-pyrifera_M_contig100938.208.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=207bp VAEHYLNFVPHLIKNIQALSPFLFGIISLSVIAVLHMTAVLLLKLLSNLIback to top mRNA from alignment at M-pyrifera_M_contig100938:30..650+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100938.208.1 ID=mRNA_M-pyrifera_M_contig100938.208.1|Name=mRNA_M-pyrifera_M_contig100938.208.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=621bp|location=Sequence derived from alignment at M-pyrifera_M_contig100938:30..650+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100938:30..650+ >mRNA_M-pyrifera_M_contig100938.208.1 ID=mRNA_M-pyrifera_M_contig100938.208.1|Name=mRNA_M-pyrifera_M_contig100938.208.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1242bp|location=Sequence derived from alignment at M-pyrifera_M_contig100938:30..650+ (Macrocystis pyrifera P11B4 male)back to top |