mRNA_M-pyrifera_M_contig109955.2080.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig109955.2080.1
Unique NamemRNA_M-pyrifera_M_contig109955.2080.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig109955.2080.1 vs. uniprot
Match: A0A517WFP3_9PLAN (Arylsulfatase n=9 Tax=Gimesia TaxID=1649453 RepID=A0A517WFP3_9PLAN)

HSP 1 Score: 251 bits (640), Expect = 3.230e-79
Identity = 121/130 (93.08%), Postives = 125/130 (96.15%), Query Frame = 1
Query:    1 DLIADSYLDESHPHFVISGATTADQKTISPRTKAAFARWSTPPRYELYDLQQDPYEWNNLADDPDYAGTKQRLIDALTALQRQTRDPFFAPENIEAFVKEQLAHRDMRYRRQKQFRWSYLDTFADWRSAR 390
            +LIADSYLDESHPHFVISGAT ADQKTISPRTKAAFARWSTPPRYELYDLQQDPYEWNNL+DDPDYA TKQRLIDALTALQRQTRDPF   +NIEAFVKEQLAHRDMRYR+QKQFRWSYLDTFADWRSAR
Sbjct:  377 NLIADSYLDESHPHFVISGATAADQKTISPRTKAAFARWSTPPRYELYDLQQDPYEWNNLSDDPDYAETKQRLIDALTALQRQTRDPFLDHKNIEAFVKEQLAHRDMRYRKQKQFRWSYLDTFADWRSAR 506          
BLAST of mRNA_M-pyrifera_M_contig109955.2080.1 vs. uniprot
Match: A0A518A994_9PLAN (Choline-sulfatase n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A994_9PLAN)

HSP 1 Score: 241 bits (616), Expect = 1.330e-75
Identity = 114/129 (88.37%), Postives = 120/129 (93.02%), Query Frame = 1
Query:    1 DLIADSYLDESHPHFVISGATTADQKTISPRTKAAFARWSTPPRYELYDLQQDPYEWNNLADDPDYAGTKQRLIDALTALQRQTRDPFFAPENIEAFVKEQLAHRDMRYRRQKQFRWSYLDTFADWRSA 387
            +LIA SYLDESHPHFVISGAT ADQKTISP+ KAAF RWS PPRYELYDLQQDPYEWNNLADDPDYA TKQRLIDALTALQRQTRDPF  PEN+EAFVKEQLAHRDM+YR+QKQFRWSYLD FADWR+A
Sbjct:  377 NLIAGSYLDESHPHFVISGATAADQKTISPQVKAAFTRWSQPPRYELYDLQQDPYEWNNLADDPDYAATKQRLIDALTALQRQTRDPFLDPENVEAFVKEQLAHRDMKYRKQKQFRWSYLDAFADWRAA 505          
BLAST of mRNA_M-pyrifera_M_contig109955.2080.1 vs. uniprot
Match: A0A350KFT0_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KFT0_9PLAN)

HSP 1 Score: 214 bits (544), Expect = 1.480e-67
Identity = 101/128 (78.91%), Postives = 113/128 (88.28%), Query Frame = 1
Query:    1 DLIADSYLDESHPHFVISGATTADQKTISPRTKAAFARWSTPPRYELYDLQQDPYEWNNLADDPDYAGTKQRLIDALTALQRQTRDPFFAPENIEAFVKEQLAHRDMRYRRQKQFRWSYLDTFADWRS 384
            +LIADSYLDESHPHFVISGAT ADQKTISP+TK  FARWS PPRYELYDLQQDP EWNNLA+DPDY   K RLI+ALT LQ+QTRDPF  P N+EAFVKEQL +RDM+YR+QK FRWSYLD+FA+WR+
Sbjct:  145 NLIADSYLDESHPHFVISGATAADQKTISPQTKQVFARWSQPPRYELYDLQQDPCEWNNLAEDPDYTMVKTRLINALTKLQQQTRDPFLDPANLEAFVKEQLNNRDMKYRKQKDFRWSYLDSFANWRA 272          
BLAST of mRNA_M-pyrifera_M_contig109955.2080.1 vs. uniprot
Match: A0A2E2C883_9PLAN (Sulfatase n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C883_9PLAN)

HSP 1 Score: 218 bits (556), Expect = 1.150e-66
Identity = 103/128 (80.47%), Postives = 114/128 (89.06%), Query Frame = 1
Query:    1 DLIADSYLDESHPHFVISGATTADQKTISPRTKAAFARWSTPPRYELYDLQQDPYEWNNLADDPDYAGTKQRLIDALTALQRQTRDPFFAPENIEAFVKEQLAHRDMRYRRQKQFRWSYLDTFADWRS 384
            +LIADSYLDESHPHFVISGAT ADQKTISP+ K A ARWS PPRYELYDLQQDPYEWNNLA+D DYA TK RLI+ALT LQ+QTRDPF  P N+EAFVKEQL HRDM+YR+QK FRWSYLD+FA+WR+
Sbjct:  377 NLIADSYLDESHPHFVISGATAADQKTISPQVKQALARWSRPPRYELYDLQQDPYEWNNLAEDADYAATKARLINALTELQQQTRDPFLDPVNLEAFVKEQLDHRDMKYRKQKNFRWSYLDSFANWRA 504          
BLAST of mRNA_M-pyrifera_M_contig109955.2080.1 vs. uniprot
Match: A0A517VGS6_9PLAN (Arylsulfatase n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VGS6_9PLAN)

HSP 1 Score: 214 bits (544), Expect = 7.060e-65
Identity = 100/128 (78.12%), Postives = 112/128 (87.50%), Query Frame = 1
Query:    1 DLIADSYLDESHPHFVISGATTADQKTISPRTKAAFARWSTPPRYELYDLQQDPYEWNNLADDPDYAGTKQRLIDALTALQRQTRDPFFAPENIEAFVKEQLAHRDMRYRRQKQFRWSYLDTFADWRS 384
            +LIADSYLD+SHPHFVISGAT ADQKTISP+ K AF RWS PPRYELYDLQQDPYEWNNLADDP +A TK RLI+ LT  Q+QTRDPF  P N+EAFVKEQL HRDM+YR+QK FRWSYLD+FA+WR+
Sbjct:  377 NLIADSYLDQSHPHFVISGATAADQKTISPQVKQAFTRWSQPPRYELYDLQQDPYEWNNLADDPMFAATKSRLINTLTDWQQQTRDPFLDPVNLEAFVKEQLDHRDMKYRKQKDFRWSYLDSFANWRA 504          
BLAST of mRNA_M-pyrifera_M_contig109955.2080.1 vs. uniprot
Match: A0A517XEG4_9PLAN (Choline-sulfatase n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517XEG4_9PLAN)

HSP 1 Score: 210 bits (535), Expect = 2.750e-63
Identity = 98/128 (76.56%), Postives = 112/128 (87.50%), Query Frame = 1
Query:    1 DLIADSYLDESHPHFVISGATTADQKTISPRTKAAFARWSTPPRYELYDLQQDPYEWNNLADDPDYAGTKQRLIDALTALQRQTRDPFFAPENIEAFVKEQLAHRDMRYRRQKQFRWSYLDTFADWRS 384
            +LIADSYLDESHPHFVISG T ADQKTISP+TK  FARWS PPRYELYDLQQDP EWNNLA+DPDY   K RLI+ALT LQ+QTRDPF  P N+EAFVKEQL +RDM+YR+Q+ FRWSY+D+FA+WR+
Sbjct:  404 NLIADSYLDESHPHFVISGVTAADQKTISPQTKQVFARWSQPPRYELYDLQQDPCEWNNLAEDPDYTMVKTRLINALTKLQQQTRDPFLDPANLEAFVKEQLNNRDMKYRKQRDFRWSYIDSFANWRA 531          
BLAST of mRNA_M-pyrifera_M_contig109955.2080.1 vs. uniprot
Match: A0A517VV53_9PLAN (Choline-sulfatase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VV53_9PLAN)

HSP 1 Score: 185 bits (470), Expect = 6.890e-54
Identity = 88/128 (68.75%), Postives = 102/128 (79.69%), Query Frame = 1
Query:    1 DLIADSYLDESHPHFVISGATTADQKTISPRTKAAFARWSTPPRYELYDLQQDPYEWNNLADDPDYAGTKQRLIDALTALQRQTRDPFFAPENIEAFVKEQLAHRDMRYRRQKQFRWSYLDTFADWRS 384
            +L A SYLDE+HPHFVISGAT  DQ T +   K AFA WS PPRYELYDLQ+DPYEWNNLADDP +A  K RLI AL  LQ +TRDPF   +N++AFVKEQLA+RDM+YR+QK FRWSYL+TF  WR+
Sbjct:  380 NLDAGSYLDETHPHFVISGATAKDQSTANESVKQAFALWSRPPRYELYDLQKDPYEWNNLADDPAHAEIKSRLIKALIDLQERTRDPFLDQKNVDAFVKEQLANRDMKYRKQKNFRWSYLETFPQWRA 507          
BLAST of mRNA_M-pyrifera_M_contig109955.2080.1 vs. uniprot
Match: A0A518DLE9_9BACT (Choline-sulfatase n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518DLE9_9BACT)

HSP 1 Score: 175 bits (443), Expect = 5.800e-50
Identity = 83/128 (64.84%), Postives = 98/128 (76.56%), Query Frame = 1
Query:    1 DLIADSYLDESHPHFVISGATTADQKTISPRTKAAFARWSTPPRYELYDLQQDPYEWNNLADDPDYAGTKQRLIDALTALQRQTRDPFFAPENIEAFVKEQLAHRDMRYRRQKQFRWSYLDTFADWRS 384
            +L A +YLDESH HFV+SGAT ADQ T     +AAFA W  PPRYELYDL+ DP+EW NLADDP +A  K RLI AL  LQR+TRDPF  P N+EAFV+EQLA+RD+ YR Q+ FRWSYL+TF  WR+
Sbjct:  374 NLDAGTYLDESHQHFVVSGATAADQATAPDHVQAAFALWQRPPRYELYDLENDPHEWRNLADDPAHAAVKTRLIKALIDLQRRTRDPFLDPANVEAFVQEQLANRDLGYRNQQDFRWSYLNTFPKWRA 501          
BLAST of mRNA_M-pyrifera_M_contig109955.2080.1 vs. uniprot
Match: UPI00141F4316 (sulfatase n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI00141F4316)

HSP 1 Score: 174 bits (441), Expect = 1.270e-49
Identity = 80/129 (62.02%), Postives = 99/129 (76.74%), Query Frame = 1
Query:    1 DLIADSYLDESHPHFVISGATTADQKTISPRTKAAFARWSTPPRYELYDLQQDPYEWNNLADDPDYAGTKQRLIDALTALQRQTRDPFFAPENIEAFVKEQLAHRDMRYRRQKQFRWSYLDTFADWRSA 387
            +LIA SYL+ SHP+FV+SGATTADQ  I+   +  F RW  PPR+ELYDL+ DP+EW+NLADD +YA  K RLI  LT +Q++TRDPF  P N+EAFV EQ+ +RD+RYRR K FRWSYLDTF  WR +
Sbjct:  370 NLIARSYLNPSHPYFVVSGATTADQSAIALHVRNGFDRWLRPPRFELYDLKNDPHEWHNLADDSEYAAVKTRLIKTLTEMQKETRDPFLDPANVEAFVAEQVKNRDLRYRRNKNFRWSYLDTFPAWRKS 498          
BLAST of mRNA_M-pyrifera_M_contig109955.2080.1 vs. uniprot
Match: A0A2E8D4U7_9PLAN (Sulfatase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8D4U7_9PLAN)

HSP 1 Score: 167 bits (423), Expect = 5.590e-47
Identity = 79/128 (61.72%), Postives = 97/128 (75.78%), Query Frame = 1
Query:    1 DLIADSYLDESHPHFVISGATTADQKTISPRTKAAFARWSTPPRYELYDLQQDPYEWNNLADDPDYAGTKQRLIDALTALQRQTRDPFFAPENIEAFVKEQLAHRDMRYRRQKQFRWSYLDTFADWRS 384
            +L A +YLDE H HFV+SGAT  +Q   SP  + AFARWS PPRYELYDLQQDP EW++LADD  +A  K+RLI AL   Q+QTRDPF   +N++AFV EQLA+RD+ YR++K FRWSYLD F  WR+
Sbjct:  375 NLDAGTYLDEQHQHFVVSGATAKEQAAASPHVRQAFARWSRPPRYELYDLQQDPNEWHDLADDLQHAKVKERLIAALRDWQQQTRDPFIDEDNVDAFVNEQLANRDLGYRKKKDFRWSYLDDFPKWRN 502          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109955.2080.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517WFP3_9PLAN3.230e-7993.08Arylsulfatase n=9 Tax=Gimesia TaxID=1649453 RepID=... [more]
A0A518A994_9PLAN1.330e-7588.37Choline-sulfatase n=3 Tax=Gimesia panareensis TaxI... [more]
A0A350KFT0_9PLAN1.480e-6778.91Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A2E2C883_9PLAN1.150e-6680.47Sulfatase n=3 Tax=Planctomycetaceae TaxID=126 RepI... [more]
A0A517VGS6_9PLAN7.060e-6578.13Arylsulfatase n=1 Tax=Gimesia algae TaxID=2527971 ... [more]
A0A517XEG4_9PLAN2.750e-6376.56Choline-sulfatase n=6 Tax=Gimesia TaxID=1649453 Re... [more]
A0A517VV53_9PLAN6.890e-5468.75Choline-sulfatase n=2 Tax=Gimesia aquarii TaxID=25... [more]
A0A518DLE9_9BACT5.800e-5064.84Choline-sulfatase n=1 Tax=Lignipirellula cremea Ta... [more]
UPI00141F43161.270e-4962.02sulfatase n=1 Tax=Rubinisphaera sp. JC658 TaxID=27... [more]
A0A2E8D4U7_9PLAN5.590e-4761.72Sulfatase n=1 Tax=Planctomycetaceae bacterium TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig109955contigM-pyrifera_M_contig109955:208..600 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score213.8
Seed ortholog evalue4.9e-53
Seed eggNOG ortholog344747.PM8797T_24976
KEGG koko:K01565
KEGG ReactionR07814
KEGG Pathwayko00531,ko01100,ko04142,map00531,map01100,map04142
KEGG ModuleM00078
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COG3119 Arylsulfatase A
EggNOG OGs2IX47@203682,COG3119@1,COG3119@2
EC3.10.1.1
COG Functional cat.P
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size393
Cds size393
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815610.076383-CDS-M-pyrifera_M_contig109955:207..6001622815610.076383-CDS-M-pyrifera_M_contig109955:207..600Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig109955 208..600 -
1692277486.2152514-CDS-M-pyrifera_M_contig109955:207..6001692277486.2152514-CDS-M-pyrifera_M_contig109955:207..600Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig109955 208..600 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig109955.2080.1prot_M-pyrifera_M_contig109955.2080.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig109955 208..600 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig109955.2080.1

>prot_M-pyrifera_M_contig109955.2080.1 ID=prot_M-pyrifera_M_contig109955.2080.1|Name=mRNA_M-pyrifera_M_contig109955.2080.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=131bp
DLIADSYLDESHPHFVISGATTADQKTISPRTKAAFARWSTPPRYELYDL
QQDPYEWNNLADDPDYAGTKQRLIDALTALQRQTRDPFFAPENIEAFVKE
QLAHRDMRYRRQKQFRWSYLDTFADWRSAR*
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mRNA from alignment at M-pyrifera_M_contig109955:208..600-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig109955.2080.1 ID=mRNA_M-pyrifera_M_contig109955.2080.1|Name=mRNA_M-pyrifera_M_contig109955.2080.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=393bp|location=Sequence derived from alignment at M-pyrifera_M_contig109955:208..600- (Macrocystis pyrifera P11B4 male)
GACCTGATCGCAGACAGTTATCTGGATGAATCGCATCCCCACTTTGTCAT CTCCGGTGCGACTACCGCCGACCAGAAAACGATTTCACCCCGTACGAAAG CGGCTTTTGCACGCTGGTCGACGCCACCTCGCTACGAACTGTATGACCTG CAGCAGGATCCGTACGAATGGAACAATCTGGCCGACGATCCCGACTATGC GGGAACGAAGCAACGTCTGATCGACGCCTTAACAGCGCTCCAGCGACAGA CGCGGGATCCATTTTTCGCCCCTGAGAACATCGAGGCTTTCGTCAAAGAA CAACTGGCCCACCGGGATATGCGTTACCGCAGGCAGAAGCAGTTCCGCTG GTCATATCTTGATACTTTCGCCGACTGGCGTTCAGCCCGGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig109955:208..600-

>mRNA_M-pyrifera_M_contig109955.2080.1 ID=mRNA_M-pyrifera_M_contig109955.2080.1|Name=mRNA_M-pyrifera_M_contig109955.2080.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig109955:208..600- (Macrocystis pyrifera P11B4 male)
GACCTGATCGCAGACAGTTATCTGGATGAATCGCATCCCCACTTTGTCAT
CTCCGGTGCGACTACCGCCGACCAGAAAACGATTTCACCCCGTACGAAAG
CGGCTTTTGCACGCTGGTCGACGCCACCTCGCTACGAACTGTATGACCTG
CAGCAGGATCCGTACGAATGGAACAATCTGGCCGACGATCCCGACTATGC
GGGAACGAAGCAACGTCTGATCGACGCCTTAACAGCGCTCCAGCGACAGA
CGCGGGATCCATTTTTCGCCCCTGAGAACATCGAGGCTTTCGTCAAAGAA
CAACTGGCCCACCGGGATATGCGTTACCGCAGGCAGAAGCAGTTCCGCTG
GTCATATCTTGATACTTTCGCCGACTGGCGTTCAGCCCGGTAGGACCTGA
TCGCAGACAGTTATCTGGATGAATCGCATCCCCACTTTGTCATCTCCGGT
GCGACTACCGCCGACCAGAAAACGATTTCACCCCGTACGAAAGCGGCTTT
TGCACGCTGGTCGACGCCACCTCGCTACGAACTGTATGACCTGCAGCAGG
ATCCGTACGAATGGAACAATCTGGCCGACGATCCCGACTATGCGGGAACG
AAGCAACGTCTGATCGACGCCTTAACAGCGCTCCAGCGACAGACGCGGGA
TCCATTTTTCGCCCCTGAGAACATCGAGGCTTTCGTCAAAGAACAACTGG
CCCACCGGGATATGCGTTACCGCAGGCAGAAGCAGTTCCGCTGGTCATAT
CTTGATACTTTCGCCGACTGGCGTTCAGCCCGGTAG
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