mRNA_M-pyrifera_M_contig89685.20790.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89685.20790.1 vs. uniprot
Match: A0A523LLE6_9GAMM (Cytochrome c n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523LLE6_9GAMM) HSP 1 Score: 66.6 bits (161), Expect = 7.780e-12 Identity = 32/65 (49.23%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 1 MKLLRRVSLGATAILLLILGFVYSGVFNVSALVPHSSLATWLLSTTMHTSVKRRADNIELPDLRD 195 MK+++ + + +++ +GF YSG+F+V A PH LA W+LSTTMH SVKRRA +I++PDL D Sbjct: 1 MKVIKTLVIAVVVGVIVAVGFAYSGLFDVGASSPHGGLAKWVLSTTMHASVKRRAKDIDVPDLDD 65
BLAST of mRNA_M-pyrifera_M_contig89685.20790.1 vs. uniprot
Match: A0A5J4ECC5_9BACT (Cytochrome c domain-containing protein n=1 Tax=bacterium MnTg04 TaxID=2080454 RepID=A0A5J4ECC5_9BACT) HSP 1 Score: 60.5 bits (145), Expect = 1.330e-9 Identity = 29/51 (56.86%), Postives = 40/51 (78.43%), Query Frame = 1 Query: 43 LLLILGFVYSGVFNVSALVPHSSLATWLLSTTMHTSVKRRADNIELPDLRD 195 LL ++GF +SG+++VSA PHSSL +WLLSTT H S++RRA IE+P +D Sbjct: 15 LLAVVGFAHSGLYDVSANSPHSSLVSWLLSTTSHASIERRAKAIEVPRHKD 65
BLAST of mRNA_M-pyrifera_M_contig89685.20790.1 vs. uniprot
Match: A0A7Y3FZA4_9GAMM (Cytochrome c n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A7Y3FZA4_9GAMM) HSP 1 Score: 58.5 bits (140), Expect = 1.100e-8 Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 1 Query: 61 FVYSGVFNVSALVPHSSLATWLLSTTMHTSVKRRADNIELPDLRD 195 + YSG+ +VSA PHS + WLLSTT H S++RRA I++PDL D Sbjct: 21 YAYSGIHDVSASAPHSGIVNWLLSTTSHASIERRAKKIDVPDLSD 65
BLAST of mRNA_M-pyrifera_M_contig89685.20790.1 vs. uniprot
Match: A0A523M8F5_9GAMM (Cytochrome c n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523M8F5_9GAMM) HSP 1 Score: 55.5 bits (132), Expect = 1.190e-7 Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 1 Query: 46 LLILGFVYSGVFNVSALVPHSSLATWLLSTTMHTSVKRRADNIELPDL 189 L ++GF YSG+++VSA PHS+ WLLSTT H SV RRA ++ +P+L Sbjct: 16 LAVVGFAYSGLYDVSARSPHSAPIDWLLSTTSHASVARRAKDVAVPNL 63
BLAST of mRNA_M-pyrifera_M_contig89685.20790.1 vs. uniprot
Match: A0A3B0RPS8_9ZZZZ (Cytochrome c domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A3B0RPS8_9ZZZZ) HSP 1 Score: 55.1 bits (131), Expect = 1.210e-7 Identity = 26/59 (44.07%), Postives = 42/59 (71.19%), Query Frame = 1 Query: 16 RVSLGATAILLL-ILGFVYSGVFNVSALVPHSSLATWLLSTTMHTSVKRRADNIELPDL 189 +++ GA +L + +LGF YSG+FN++A H + WLL+TT + S++ RA +IE+PDL Sbjct: 5 KIAFGAALVLGVGVLGFAYSGIFNIAATATHDPVTNWLLTTTRNRSIEVRAQDIEVPDL 63
BLAST of mRNA_M-pyrifera_M_contig89685.20790.1 vs. uniprot
Match: A0A2H0D5R6_9BACT (Cytochrome C class I protein n=2 Tax=unclassified Ignavibacteria TaxID=1798416 RepID=A0A2H0D5R6_9BACT) HSP 1 Score: 55.1 bits (131), Expect = 1.230e-7 Identity = 23/46 (50.00%), Postives = 36/46 (78.26%), Query Frame = 1 Query: 61 FVYSGVFNVSALVPHSSLATWLLSTTMHTSVKRRADN-IELPDLRD 195 F+YSG++N+SA+VPH++L W+++T SVK AD+ I++PDL D Sbjct: 21 FIYSGIYNISAMVPHNNLTLWMMNTVRDNSVKHNADDKIKMPDLSD 66
BLAST of mRNA_M-pyrifera_M_contig89685.20790.1 vs. uniprot
Match: A0A2E5MM62_9ALTE (Cytochrome c domain-containing protein n=1 Tax=Alteromonadaceae bacterium TaxID=1916082 RepID=A0A2E5MM62_9ALTE) HSP 1 Score: 54.3 bits (129), Expect = 4.850e-7 Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 1 Query: 61 FVYSGVFNVSALVPHSSLATWLLSTTMHTSVKRRADNIELPDLRD 195 F++SG++NVSA HSS+ TW L TMH+SV R +NI+ PDL + Sbjct: 21 FIFSGIYNVSARDEHSSIETWALHQTMHSSVDARIENIKAPDLNN 65
BLAST of mRNA_M-pyrifera_M_contig89685.20790.1 vs. uniprot
Match: A0A3D6B782_9BACT (Cytochrome C class I protein n=1 Tax=Ignavibacteriales bacterium TaxID=2049428 RepID=A0A3D6B782_9BACT) HSP 1 Score: 53.1 bits (126), Expect = 6.640e-7 Identity = 27/61 (44.26%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 28 GATAIL-LLILG---FVYSGVFNVSALVPHSSLATWLLSTTMHTSVKRRAD-NIELPDLRD 195 GA A++ LLI+G F+YSG++N+SA++ H L W+++T S+K AD +I++PDL D Sbjct: 6 GAVAVIALLIVGYLIFIYSGIYNISAMIHHDKLTNWMMNTVRENSIKHNADEDIKMPDLTD 66
BLAST of mRNA_M-pyrifera_M_contig89685.20790.1 vs. uniprot
Match: K6Z7V9_9ALTE (Cytochrome c family protein n=2 Tax=Paraglaciecola TaxID=1621534 RepID=K6Z7V9_9ALTE) HSP 1 Score: 53.1 bits (126), Expect = 6.720e-7 Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 1 Query: 40 ILLLILGF------VYSGVFNVSALVPHSSLATWLLSTTMHTSVKRRADNIELPDLRD 195 +LL++LG +YSG+ NV+A PHS L WLL T TS+K+ A++IE+PDL D Sbjct: 8 LLLVVLGIAAATTVIYSGIVNVAADEPHSDLVYWLLEETRETSIKKAAEDIEVPDLVD 65
BLAST of mRNA_M-pyrifera_M_contig89685.20790.1 vs. uniprot
Match: A0A6N1DNQ8_9GAMM (Cytochrome c n=1 Tax=Ectothiorhodospiraceae bacterium 2226 TaxID=2740164 RepID=A0A6N1DNQ8_9GAMM) HSP 1 Score: 52.8 bits (125), Expect = 1.030e-6 Identity = 28/63 (44.44%), Postives = 40/63 (63.49%), Query Frame = 1 Query: 13 RRVSLGATAILLLILG----FVYSGVFNVSALVPHSSLATWLLSTTMHTSVKRRADNIELPDL 189 R+V L +LL G F+YSG+++++A PH+ W++ TTM SVKRRA NIE P+L Sbjct: 7 RQVLLALAVFVLLAAGGGVAFIYSGIYDIAATEPHTRPVRWVMQTTMEHSVKRRAANIEAPEL 69 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89685.20790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89685.20790.1 >prot_M-pyrifera_M_contig89685.20790.1 ID=prot_M-pyrifera_M_contig89685.20790.1|Name=mRNA_M-pyrifera_M_contig89685.20790.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=66bp MKLLRRVSLGATAILLLILGFVYSGVFNVSALVPHSSLATWLLSTTMHTSback to top mRNA from alignment at M-pyrifera_M_contig89685:2..199- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89685.20790.1 ID=mRNA_M-pyrifera_M_contig89685.20790.1|Name=mRNA_M-pyrifera_M_contig89685.20790.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=198bp|location=Sequence derived from alignment at M-pyrifera_M_contig89685:2..199- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89685:2..199- >mRNA_M-pyrifera_M_contig89685.20790.1 ID=mRNA_M-pyrifera_M_contig89685.20790.1|Name=mRNA_M-pyrifera_M_contig89685.20790.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig89685:2..199- (Macrocystis pyrifera P11B4 male)back to top |