mRNA_M-pyrifera_M_contig89633.20784.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89633.20784.1
Unique NamemRNA_M-pyrifera_M_contig89633.20784.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89633.20784.1 vs. uniprot
Match: A0A518A249_9PLAN (Uncharacterized protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A518A249_9PLAN)

HSP 1 Score: 503 bits (1296), Expect = 3.250e-166
Identity = 246/267 (92.13%), Postives = 256/267 (95.88%), Query Frame = 1
Query:    1 ESLLRTHLHELKGTTPAFQSIDQAEKVLKIAFEECLPQYTTHHRDLLFHICRKEFLQPYFLAVMFEALLEQTGRWDTDQELVTAAIDKLNDFVGFRPVAVLENGRQMQVYSHEKFRPMPVFFRGSGVACGNYQRLIEQTIKTLETTPEDLLHQAHFNLEKMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHIIDNQGYYRRFVIRRLILDSLLAWIDEHKEIPLQERLQDAAAVLSGTMLMASSISGSGPDTHASDISLTSLLPTVA 801
            E+LL THL E+KGTTPAFQ IDQA+KV++I F+ECLPQY THHRDLLFHIC KEFLQPYFLAVMFEALLEQT  W+TDQELVTAAIDKLNDFVGFRPVAVLENGRQMQVY HEKFRP+P++FRGSGVA GNYQRLIEQTIKTLETTPEDLLHQAHFNLEKMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHIIDNQGYYRRFVIRRLILDSLLAWIDEHKEIPLQERLQDAAAVLSGTMLMASSISGSGPDTHASDISLTSLLP VA
Sbjct:   61 ETLLLTHLQEIKGTTPAFQEIDQADKVIRIGFQECLPQYRTHHRDLLFHICGKEFLQPYFLAVMFEALLEQTSLWETDQELVTAAIDKLNDFVGFRPVAVLENGRQMQVYPHEKFRPLPLYFRGSGVASGNYQRLIEQTIKTLETTPEDLLHQAHFNLEKMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHIIDNQGYYRRFVIRRLILDSLLAWIDEHKEIPLQERLQDAAAVLSGTMLMASSISGSGPDTHASDISLTSLLPKVA 327          
BLAST of mRNA_M-pyrifera_M_contig89633.20784.1 vs. uniprot
Match: A6C5G3_9PLAN (Uncharacterized protein n=10 Tax=Planctomycetaceae TaxID=126 RepID=A6C5G3_9PLAN)

HSP 1 Score: 456 bits (1172), Expect = 6.220e-148
Identity = 221/267 (82.77%), Postives = 240/267 (89.89%), Query Frame = 1
Query:    1 ESLLRTHLHELKGTTPAFQSIDQAEKVLKIAFEECLPQYTTHHRDLLFHICRKEFLQPYFLAVMFEALLEQTGRWDTDQELVTAAIDKLNDFVGFRPVAVLENGRQMQVYSHEKFRPMPVFFRGSGVACGNYQRLIEQTIKTLETTPEDLLHQAHFNLEKMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHIIDNQGYYRRFVIRRLILDSLLAWIDEHKEIPLQERLQDAAAVLSGTMLMASSISGSGPDTHASDISLTSLLPTVA 801
            E LL T L  LKGT+ AFQ I QAE V+++A +ECLP+Y  HHRDLLFHIC +EFLQPYFL+V+FE+LLEQ G W     +VT  ID+LNDFVGFRPVAVLENGRQMQVY HEKFRP+PV+FR SGVACG YQ+LIEQTIKTL+TTP+DLLHQAHF LE+MDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHIIDNQGYYRRFVIRRLILDSLLAWIDEHKEIPLQERL+DAAAVLSGTMLMASSISGSGPDTHASDISLTSLLP VA
Sbjct:   61 ELLLGTQLKALKGTSGAFQEITQAENVIRLALQECLPRYRAHHRDLLFHICEREFLQPYFLSVLFESLLEQGGPWSETDRIVTGTIDRLNDFVGFRPVAVLENGRQMQVYPHEKFRPLPVYFRDSGVACGVYQKLIEQTIKTLQTTPDDLLHQAHFRLERMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHIIDNQGYYRRFVIRRLILDSLLAWIDEHKEIPLQERLEDAAAVLSGTMLMASSISGSGPDTHASDISLTSLLPKVA 327          
BLAST of mRNA_M-pyrifera_M_contig89633.20784.1 vs. uniprot
Match: A0A517RBC6_9PLAN (Uncharacterized protein n=3 Tax=Gimesia TaxID=1649453 RepID=A0A517RBC6_9PLAN)

HSP 1 Score: 440 bits (1132), Expect = 6.840e-142
Identity = 214/267 (80.15%), Postives = 241/267 (90.26%), Query Frame = 1
Query:    1 ESLLRTHLHELKGTTPAFQSIDQAEKVLKIAFEECLPQYTTHHRDLLFHICRKEFLQPYFLAVMFEALLEQTGRWDTDQELVTAAIDKLNDFVGFRPVAVLENGRQMQVYSHEKFRPMPVFFRGSGVACGNYQRLIEQTIKTLETTPEDLLHQAHFNLEKMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHIIDNQGYYRRFVIRRLILDSLLAWIDEHKEIPLQERLQDAAAVLSGTMLMASSISGSGPDTHASDISLTSLLPTVA 801
            E LL +HL EL+GTT AFQ I QAE V++IAFEECLPQY  HHRDLLFH+  +E +QPYFLAV+FEALLEQ G W+  Q++V+  I++LNDFVGFRPVAVLENGRQMQVY HEKFRP+PV+F  SGVA G+YQRLIEQTIKTL+ TP+DLLHQA+F+L+KMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPH+IDNQGYYRRFVIRRLILDSLLAWIDE+++IPL+ERLQDAAAVLSGTMLMASSISG GPDTHASD SLTSLLP VA
Sbjct:   95 ELLLISHLKELEGTTGAFQEIKQAESVIQIAFEECLPQYRQHHRDLLFHVTEQELIQPYFLAVLFEALLEQGGPWEPTQQVVSGTINRLNDFVGFRPVAVLENGRQMQVYPHEKFRPLPVYFCESGVASGSYQRLIEQTIKTLQNTPDDLLHQAYFSLDKMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHVIDNQGYYRRFVIRRLILDSLLAWIDENEDIPLEERLQDAAAVLSGTMLMASSISGCGPDTHASDTSLTSLLPRVA 361          
BLAST of mRNA_M-pyrifera_M_contig89633.20784.1 vs. uniprot
Match: A0A517X2L8_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X2L8_9PLAN)

HSP 1 Score: 438 bits (1126), Expect = 3.370e-141
Identity = 210/266 (78.95%), Postives = 239/266 (89.85%), Query Frame = 1
Query:    4 SLLRTHLHELKGTTPAFQSIDQAEKVLKIAFEECLPQYTTHHRDLLFHICRKEFLQPYFLAVMFEALLEQTGRWDTDQELVTAAIDKLNDFVGFRPVAVLENGRQMQVYSHEKFRPMPVFFRGSGVACGNYQRLIEQTIKTLETTPEDLLHQAHFNLEKMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHIIDNQGYYRRFVIRRLILDSLLAWIDEHKEIPLQERLQDAAAVLSGTMLMASSISGSGPDTHASDISLTSLLPTVA 801
            SLL + L+ LKGTTPAFQ I QAE VL+IAF+ECLP+Y  HHRDLLFH+  ++FLQPYFLAV+FEA+LEQ   W++D  +V  AIDKLNDFVGFRPVA+LEN ++MQVY HEKFRP+P++FR SGVACG YQRLIE T+KTL++TP DLLHQAHF L+KMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPH IDNQGYYRRF+IR+LILDSLLAWIDE+KE+PLQERLQDAAAVLSGTMLMASSISGSGPDTH+S+ SLTSLLP VA
Sbjct:   62 SLLSSELNALKGTTPAFQEIKQAENVLRIAFKECLPKYKQHHRDLLFHVTEQDFLQPYFLAVLFEAILEQQTPWESDTHVVQGAIDKLNDFVGFRPVAILENNQKMQVYPHEKFRPIPLYFRESGVACGPYQRLIEFTLKTLQSTPNDLLHQAHFGLDKMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHTIDNQGYYRRFIIRKLILDSLLAWIDENKELPLQERLQDAAAVLSGTMLMASSISGSGPDTHSSETSLTSLLPKVA 327          
BLAST of mRNA_M-pyrifera_M_contig89633.20784.1 vs. uniprot
Match: A0A7C2K0T5_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C2K0T5_9PLAN)

HSP 1 Score: 330 bits (846), Expect = 2.610e-103
Identity = 155/260 (59.62%), Postives = 205/260 (78.85%), Query Frame = 1
Query:   22 LHELKGTTPAFQSIDQAEKVLKIAFEECLPQYTTHHRDLLFHICRKEFLQPYFLAVMFEALLEQTGRWDTDQELVTAAIDKLNDFVGFRPVAVLENGRQMQVYSHEKFRPMPVFFRGSGVACGNYQRLIEQTIKTLETTPEDLLHQAHFNLEKMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHIIDNQGYYRRFVIRRLILDSLLAWIDEHKEIPLQERLQDAAAVLSGTMLMASSISGSGPDTHASDISLTSLLPTVA 801
            L +L+   PAF    QAE V+K+AFE  LP Y   HRDLLFH+  ++F QP+FL  ++EA+LEQ   W+  + +VT +ID+LN+F+G+RPVAVLENGR+M+ Y HE+FRP+P+F RG+GVA G Y+ ++ + ++ L +TPED+L +AHF+LE +DE+A+D RAHDHLHP NKRTNY+FGEWDPH ID +G YRRFV+R++ILD+LL WI   K +P +E L DAAAVLSGT+LMAS+ISG+GPDTH S +SLTSLLP VA
Sbjct:   53 LSQLQAEAPAFHDSRQAEAVVKLAFEHVLPAYREFHRDLLFHLTDEDFEQPFFLVRIWEAILEQGSPWEETERIVTGSIDRLNEFLGYRPVAVLENGRRMEPYEHERFRPIPLFLRGAGVAHGPYEDVVSRALELLRSTPEDILSEAHFSLESLDELALDPRAHDHLHPANKRTNYLFGEWDPHQIDLKGRYRRFVVRKVILDALLNWIRLQKRVPTEEVLFDAAAVLSGTILMASAISGAGPDTHDSTVSLTSLLPRVA 312          
BLAST of mRNA_M-pyrifera_M_contig89633.20784.1 vs. uniprot
Match: A0A3B1DNX7_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DNX7_9ZZZZ)

HSP 1 Score: 320 bits (820), Expect = 5.540e-97
Identity = 150/264 (56.82%), Postives = 208/264 (78.79%), Query Frame = 1
Query:   10 LRTHLHELKGTTPAFQSIDQAEKVLKIAFEECLPQYTTHHRDLLFHICRKEFLQPYFLAVMFEALLEQTGRWDTDQELVTAAIDKLNDFVGFRPVAVLENGRQMQVYSHEKFRPMPVFFRGSGVACGNYQRLIEQTIKTLETTPEDLLHQAHFNLEKMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHIIDNQGYYRRFVIRRLILDSLLAWIDEHKEIPLQERLQDAAAVLSGTMLMASSISGSGPDTHASDISLTSLLPTVA 801
            L + L++LK   PAFQ  +QA +V+++ F++CLP Y  +H DLLFH+  KE  QP+FLA MFEA+L Q   W+    +V   + +LNDF+G RPVAVLEN R+ Q Y++E+ RP+P++ +G+G+A G YQ+LIE+T++ L+ TP +LL  A F+LE+M+E+++D+RAHDH HP NKRTNYMFGEWDPHIID +GYY RF++R++I+D+LL+W+D++ ++P +ERL DAAAVL GT+LMASSISGSGPDT  S ISLT+LLP VA
Sbjct:   92 LLSALNQLKEE-PAFQDSEQATRVIQLLFDDCLPAYWLYHADLLFHLSEKELEQPFFLAKMFEAILSQGAPWNDAGRIVQGTLAQLNDFLGHRPVAVLENERKCQPYTYERHRPVPLYLKGAGIAVGKYQKLIERTLQFLKETPHELLDAAWFDLERMEELSLDMRAHDHNHPANKRTNYMFGEWDPHIIDTKGYYNRFLLRKIIVDALLSWMDDNSDLPWEERLHDAAAVLCGTILMASSISGSGPDTFDSSISLTALLPHVA 354          
BLAST of mRNA_M-pyrifera_M_contig89633.20784.1 vs. uniprot
Match: A0A3E0Q3A8_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0Q3A8_9BACT)

HSP 1 Score: 318 bits (814), Expect = 1.930e-96
Identity = 152/266 (57.14%), Postives = 194/266 (72.93%), Query Frame = 1
Query:    4 SLLRTHLHELKGTTPAFQSIDQAEKVLKIAFEECLPQYTTHHRDLLFHICRKEFLQPYFLAVMFEALLEQTGRWDTDQELVTAAIDKLNDFVGFRPVAVLENGRQMQVYSHEKFRPMPVFFRGSGVACGNYQRLIEQTIKTLETTPEDLLHQAHFNLEKMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHIIDNQGYYRRFVIRRLILDSLLAWIDEHKEIPLQERLQDAAAVLSGTMLMASSISGSGPDTHASDISLTSLLPTVA 801
            +LLR  L+ L G++ AF    QA  V+  A EE    Y  HH DLLFH+   +F QPY L   FEA+L +   WD    ++  A+ +LNDFVG+RPVAVLENGR+ +VY HE++RP+PV+ RG+G A G Y  LIEQTI  L+  P DLL Q+HF L  +DE+++D+RAHDH+HPVNKRTNYMFGEWDPH+ID +G YRRFV+R++ILDSL  W+++  +   +ERL DAAA L GTMLMA+SISGSGP+TH S +SLTSLLP VA
Sbjct:   61 ALLRDELNSLAGSSAAFADCRQANAVIGYALEELPEAYRAHHADLLFHLEDSDFEQPYLLGCFFEAVLAEGEPWDDRNRIINGALARLNDFVGYRPVAVLENGRRSEVYDHERYRPLPVYIRGAGTAAGKYHDLIEQTIAFLDEAPSDLLEQSHFRLRVLDELSVDMRAHDHMHPVNKRTNYMFGEWDPHVIDVKGDYRRFVVRKIILDSLCDWVEKDGQGARKERLFDAAAALCGTMLMAASISGSGPETHDSSVSLTSLLPVVA 326          
BLAST of mRNA_M-pyrifera_M_contig89633.20784.1 vs. uniprot
Match: A0A5C9CGG3_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A5C9CGG3_9BACT)

HSP 1 Score: 310 bits (794), Expect = 3.520e-96
Identity = 150/267 (56.18%), Postives = 198/267 (74.16%), Query Frame = 1
Query:    1 ESLLRTHLHELKGTTPAFQSIDQAEKVLKIAFEECLPQYTTHHRDLLFHICRKEFLQPYFLAVMFEALLEQTGRWDTDQELVTAAIDKLNDFVGFRPVAVLENGRQMQVYSHEKFRPMPVFFRGSGVACGNYQRLIEQTIKTLETTPEDLLHQAHFNLEKMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHIIDNQGYYRRFVIRRLILDSLLAWIDEHKEIPLQERLQDAAAVLSGTMLMASSISGSGPDTHASDISLTSLLPTVA 801
            E+ L + L EL+ T+ AF+   QA  VL++ F +  P Y  HH DLLFH+   +F QP FL+ +FEA+L Q   WD  + +V+ A+D LNDF+GFRPVAVLEN R+M+ Y  E+FRP+P++F+G G   G YQ LI +T++ ++  P +LL  A F+L ++DEIA D+RAHDH HPV KRTNYMFGEWDPH IDN+GY+RRF++R++ILDSLL W+ E  + P +E L DAA+VL GTMLMAS+ISG+GPDTH S I+LTSLLP VA
Sbjct:   81 EAALLSRLGELETTSAAFKDSAQARAVLQLTFHQLWPAYRQHHADLLFHLSDADFQQPLFLSRLFEAVLAQGSPWDETERIVSGALDGLNDFIGFRPVAVLENDRKMEPYPKERFRPIPIYFQGVGAGRGPYQELITRTMELMQGVPANLLQNAFFDLRRLDEIACDVRAHDHNHPVYKRTNYMFGEWDPHHIDNKGYFRRFILRKIILDSLLNWMAEQTDQPPEESLFDAASVLCGTMLMASAISGAGPDTHDSTITLTSLLPRVA 347          
BLAST of mRNA_M-pyrifera_M_contig89633.20784.1 vs. uniprot
Match: UPI0002EB1C27 (hypothetical protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI0002EB1C27)

HSP 1 Score: 316 bits (809), Expect = 9.300e-96
Identity = 154/265 (58.11%), Postives = 197/265 (74.34%), Query Frame = 1
Query:    7 LLRTHLHELKGTTPAFQSIDQAEKVLKIAFEECLPQYTTHHRDLLFHICRKEFLQPYFLAVMFEALLEQTGRWDTDQELVTAAIDKLNDFVGFRPVAVLENGRQMQVYSHEKFRPMPVFFRGSGVACGNYQRLIEQTIKTLETTPEDLLHQAHFNLEKMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHIIDNQGYYRRFVIRRLILDSLLAWIDEHKEIPLQERLQDAAAVLSGTMLMASSISGSGPDTHASDISLTSLLPTVA 801
            +LR  L EL  TTPAF  I+QAE VL + F+  LP Y  HHRDLL H+  +EF QP+FLA +FEA+LEQ G W+    +V  AI +LNDFVG+RP+AVLENGR+M VY HE+ RP P++ R +GVA G YQ LI+  +  L   PE++L  A+F+ +++DE+A+D RAHDH HPVNKRTNY+FGEWDPH ID +G YRRFVIRR+I+DSLL W  + K +  +E L D AAVL GT+LMAS+ISG GP+ H S+++LTSLLP VA
Sbjct:   72 VLRHVLAELHQTTPAFSDINQAEAVLSLVFDTALPAYREHHRDLLAHLSDEEFQQPFFLAKLFEAVLEQGGPWEERDRIVRRAIQRLNDFVGYRPIAVLENGRKMDVYPHERVRPWPLYIRNAGVANGPYQTLIQSALDLLAKVPEEMLSDAYFDFDQLDELALDPRAHDHSHPVNKRTNYLFGEWDPHQIDIRGRYRRFVIRRVIIDSLLDWQKKQKRVAEEEVLFDMAAVLCGTILMASAISGDGPERHDSNVTLTSLLPRVA 336          
BLAST of mRNA_M-pyrifera_M_contig89633.20784.1 vs. uniprot
Match: A0A7C4QT80_9PLAN (Uncharacterized protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C4QT80_9PLAN)

HSP 1 Score: 313 bits (801), Expect = 9.800e-95
Identity = 145/265 (54.72%), Postives = 199/265 (75.09%), Query Frame = 1
Query:    7 LLRTHLHELKGTTPAFQSIDQAEKVLKIAFEECLPQYTTHHRDLLFHICRKEFLQPYFLAVMFEALLEQTGRWDTDQELVTAAIDKLNDFVGFRPVAVLENGRQMQVYSHEKFRPMPVFFRGSGVACGNYQRLIEQTIKTLETTPEDLLHQAHFNLEKMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHIIDNQGYYRRFVIRRLILDSLLAWIDEHKEIPLQERLQDAAAVLSGTMLMASSISGSGPDTHASDISLTSLLPTVA 801
            +LR  L++L    P F    QA+  + +AF+   P Y   HRDLL H+  ++F   + L   +EA+LEQ   W+  Q +V  A+D+LNDF+G+RPVAVLENGR+M+ Y HE+FRP+P++ RG GVA G Y+ ++ + ++ L +TPEDLL  A+F+LE+++E+A+D RAHDHLHP NKRTNY+FGEWDPH+ID  GYYRRFV+R++ILD+LL WI E + +P +E L DA+AVL+GT+LMASSISG+GPDTH S ++LTSLLP VA
Sbjct:   48 VLRKVLNQLHAEAPVFHDRRQADAAISLAFDHLFPAYREFHRDLLGHLTEEDFRHSFLLVRFWEAILEQGPPWEDTQRIVQGALDRLNDFLGYRPVAVLENGRRMEPYPHERFRPIPLYLRGVGVAHGPYREVVSRALELLRSTPEDLLQDAYFSLERLEELALDPRAHDHLHPANKRTNYLFGEWDPHLIDLAGYYRRFVVRKVILDALLHWIREQRRVPKEEVLFDASAVLAGTILMASSISGAGPDTHDSSVTLTSLLPKVA 312          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89633.20784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518A249_9PLAN3.250e-16692.13Uncharacterized protein n=8 Tax=Gimesia TaxID=1649... [more]
A6C5G3_9PLAN6.220e-14882.77Uncharacterized protein n=10 Tax=Planctomycetaceae... [more]
A0A517RBC6_9PLAN6.840e-14280.15Uncharacterized protein n=3 Tax=Gimesia TaxID=1649... [more]
A0A517X2L8_9PLAN3.370e-14178.95Uncharacterized protein n=2 Tax=Gimesia aquarii Ta... [more]
A0A7C2K0T5_9PLAN2.610e-10359.62Uncharacterized protein (Fragment) n=1 Tax=Schlesn... [more]
A0A3B1DNX7_9ZZZZ5.540e-9756.82Uncharacterized protein (Fragment) n=1 Tax=hydroth... [more]
A0A3E0Q3A8_9BACT1.930e-9657.14Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A5C9CGG3_9BACT3.520e-9656.18Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
UPI0002EB1C279.300e-9658.11hypothetical protein n=1 Tax=Schlesneria paludicol... [more]
A0A7C4QT80_9PLAN9.800e-9554.72Uncharacterized protein n=1 Tax=Schlesneria paludi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89633contigM-pyrifera_M_contig89633:3..803 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score456.4
Seed ortholog evalue8.9e-126
Seed eggNOG ortholog344747.PM8797T_18239
Hectar predicted targeting categoryother localisation
EggNOG OGs2CCVA@1,2IXYN@203682,2Z8KZ@2
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size801
Cds size801
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816807.516829-CDS-M-pyrifera_M_contig89633:2..8031622816807.516829-CDS-M-pyrifera_M_contig89633:2..803Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89633 3..803 +
1692278190.2878082-CDS-M-pyrifera_M_contig89633:2..8031692278190.2878082-CDS-M-pyrifera_M_contig89633:2..803Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89633 3..803 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89633.20784.1prot_M-pyrifera_M_contig89633.20784.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89633 3..803 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89633.20784.1

>prot_M-pyrifera_M_contig89633.20784.1 ID=prot_M-pyrifera_M_contig89633.20784.1|Name=mRNA_M-pyrifera_M_contig89633.20784.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=267bp
ESLLRTHLHELKGTTPAFQSIDQAEKVLKIAFEECLPQYTTHHRDLLFHI
CRKEFLQPYFLAVMFEALLEQTGRWDTDQELVTAAIDKLNDFVGFRPVAV
LENGRQMQVYSHEKFRPMPVFFRGSGVACGNYQRLIEQTIKTLETTPEDL
LHQAHFNLEKMDEIAIDLRAHDHLHPVNKRTNYMFGEWDPHIIDNQGYYR
RFVIRRLILDSLLAWIDEHKEIPLQERLQDAAAVLSGTMLMASSISGSGP
DTHASDISLTSLLPTVA
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mRNA from alignment at M-pyrifera_M_contig89633:3..803+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89633.20784.1 ID=mRNA_M-pyrifera_M_contig89633.20784.1|Name=mRNA_M-pyrifera_M_contig89633.20784.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=801bp|location=Sequence derived from alignment at M-pyrifera_M_contig89633:3..803+ (Macrocystis pyrifera P11B4 male)
GAGTCGTTGCTGCGCACTCACTTACATGAACTCAAAGGGACGACCCCGGC ATTTCAGTCCATCGATCAGGCAGAGAAAGTCCTCAAAATTGCATTTGAGG AATGCCTGCCGCAATACACCACCCATCACCGGGACCTGCTGTTCCATATC TGCCGAAAAGAGTTCCTGCAGCCTTACTTCCTCGCCGTCATGTTTGAAGC TCTGCTCGAACAGACCGGTCGCTGGGATACCGACCAGGAACTAGTCACCG CTGCCATCGATAAGCTGAATGACTTCGTCGGTTTTCGGCCGGTCGCCGTT CTGGAAAATGGTCGACAGATGCAGGTCTATTCACACGAAAAATTTCGCCC GATGCCGGTCTTTTTTCGTGGCAGTGGAGTCGCCTGTGGAAATTACCAGC GTCTCATCGAACAGACGATCAAGACCCTGGAAACGACTCCCGAAGATCTG CTGCATCAGGCACATTTCAATCTGGAAAAAATGGACGAGATCGCCATCGA TCTCCGGGCACACGATCACCTGCACCCGGTCAACAAACGCACCAACTACA TGTTCGGGGAATGGGATCCGCACATCATTGACAACCAGGGCTATTACCGA CGGTTTGTCATCCGCAGACTGATCCTCGATTCCCTGCTGGCCTGGATTGA TGAACACAAAGAGATCCCGCTGCAGGAACGACTGCAGGATGCAGCAGCTG TCTTGAGTGGCACCATGCTGATGGCGTCTTCGATCAGTGGTTCCGGACCT GATACCCACGCCAGTGATATCAGCCTGACCTCCTTGCTCCCTACAGTCGC T
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89633:3..803+

>mRNA_M-pyrifera_M_contig89633.20784.1 ID=mRNA_M-pyrifera_M_contig89633.20784.1|Name=mRNA_M-pyrifera_M_contig89633.20784.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1602bp|location=Sequence derived from alignment at M-pyrifera_M_contig89633:3..803+ (Macrocystis pyrifera P11B4 male)
GAGTCGTTGCTGCGCACTCACTTACATGAACTCAAAGGGACGACCCCGGC
ATTTCAGTCCATCGATCAGGCAGAGAAAGTCCTCAAAATTGCATTTGAGG
AATGCCTGCCGCAATACACCACCCATCACCGGGACCTGCTGTTCCATATC
TGCCGAAAAGAGTTCCTGCAGCCTTACTTCCTCGCCGTCATGTTTGAAGC
TCTGCTCGAACAGACCGGTCGCTGGGATACCGACCAGGAACTAGTCACCG
CTGCCATCGATAAGCTGAATGACTTCGTCGGTTTTCGGCCGGTCGCCGTT
CTGGAAAATGGTCGACAGATGCAGGTCTATTCACACGAAAAATTTCGCCC
GATGCCGGTCTTTTTTCGTGGCAGTGGAGTCGCCTGTGGAAATTACCAGC
GTCTCATCGAACAGACGATCAAGACCCTGGAAACGACTCCCGAAGATCTG
CTGCATCAGGCACATTTCAATCTGGAAAAAATGGACGAGATCGCCATCGA
TCTCCGGGCACACGATCACCTGCACCCGGTCAACAAACGCACCAACTACA
TGTTCGGGGAATGGGATCCGCACATCATTGACAACCAGGGCTATTACCGA
CGGTTTGTCATCCGCAGACTGATCCTCGATTCCCTGCTGGCCTGGATTGA
TGAACACAAAGAGATCCCGCTGCAGGAACGACTGCAGGATGCAGCAGCTG
TCTTGAGTGGCACCATGCTGATGGCGTCTTCGATCAGTGGTTCCGGACCT
GATACCCACGCCAGTGATATCAGCCTGACCTCCTTGCTCCCTACAGTCGC
TGAGTCGTTGCTGCGCACTCACTTACATGAACTCAAAGGGACGACCCCGG
CATTTCAGTCCATCGATCAGGCAGAGAAAGTCCTCAAAATTGCATTTGAG
GAATGCCTGCCGCAATACACCACCCATCACCGGGACCTGCTGTTCCATAT
CTGCCGAAAAGAGTTCCTGCAGCCTTACTTCCTCGCCGTCATGTTTGAAG
CTCTGCTCGAACAGACCGGTCGCTGGGATACCGACCAGGAACTAGTCACC
GCTGCCATCGATAAGCTGAATGACTTCGTCGGTTTTCGGCCGGTCGCCGT
TCTGGAAAATGGTCGACAGATGCAGGTCTATTCACACGAAAAATTTCGCC
CGATGCCGGTCTTTTTTCGTGGCAGTGGAGTCGCCTGTGGAAATTACCAG
CGTCTCATCGAACAGACGATCAAGACCCTGGAAACGACTCCCGAAGATCT
GCTGCATCAGGCACATTTCAATCTGGAAAAAATGGACGAGATCGCCATCG
ATCTCCGGGCACACGATCACCTGCACCCGGTCAACAAACGCACCAACTAC
ATGTTCGGGGAATGGGATCCGCACATCATTGACAACCAGGGCTATTACCG
ACGGTTTGTCATCCGCAGACTGATCCTCGATTCCCTGCTGGCCTGGATTG
ATGAACACAAAGAGATCCCGCTGCAGGAACGACTGCAGGATGCAGCAGCT
GTCTTGAGTGGCACCATGCTGATGGCGTCTTCGATCAGTGGTTCCGGACC
TGATACCCACGCCAGTGATATCAGCCTGACCTCCTTGCTCCCTACAGTCG
CT
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