prot_M-pyrifera_M_contig89624.20781.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig89624.20781.1
Unique Nameprot_M-pyrifera_M_contig89624.20781.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length185
Homology
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A5A8DSP9_CAFRO (TBC1 domain family member 23 n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DSP9_CAFRO)

HSP 1 Score: 163 bits (413), Expect = 2.910e-43
Identity = 92/184 (50.00%), Postives = 119/184 (64.67%), Query Frame = 0
Query:    2 LVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 185
            L +AI+  E  LSN+RV+RVD +RTRQ +  F+S+E K R+ RLL+F+C+  A PYRQG+NEV+APLL+L     G  DG+      K  E    D  V+ +LQ + T   PAAY  DDDFVGLQC+L + RLLL +HDP L+  L Q+   PELFATPW+ TL AR      V+ LWD L+L 
Sbjct:   60 LSEAIASGEATLSNKRVLRVDCDRTRQTVAAFQSDEGKARLARLLSFFCKCQATPYRQGLNEVVAPLLLL-----GA-DGEAECAAGKLTE--LSDSAVHRLLQGMVTTFLPAAYGADDDFVGLQCSLEYVRLLLVFHDPELARILQQHSVTPELFATPWLFTLLARGHSLPVVYSLWDSLVLH 235          
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A5A8E0D2_CAFRO (TBC1 domain family member 23 n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E0D2_CAFRO)

HSP 1 Score: 163 bits (413), Expect = 3.090e-43
Identity = 92/184 (50.00%), Postives = 119/184 (64.67%), Query Frame = 0
Query:    2 LVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 185
            L +AI+  E  LSN+RV+RVD +RTRQ +  F+S+E K R+ RLL+F+C+  A PYRQG+NEV+APLL+L     G  DG+      K  E    D  V+ +LQ + T   PAAY  DDDFVGLQC+L + RLLL +HDP L+  L Q+   PELFATPW+ TL AR      V+ LWD L+L 
Sbjct:  781 LSEAIASGEATLSNKRVLRVDCDRTRQTVAAFQSDEGKARLARLLSFFCKCQATPYRQGLNEVVAPLLLL-----GA-DGEAECAAGKLTE--LSDSAVHRLLQGMVTTFLPAAYGADDDFVGLQCSLEYVRLLLVFHDPELARILQQHSVTPELFATPWLFTLLARGHSLPVVYSLWDSLVLH 956          
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A2R5GE11_9STRA (TBC1 domain family member 23 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GE11_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.560e-38
Identity = 81/184 (44.02%), Postives = 111/184 (60.33%), Query Frame = 0
Query:    2 LVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 185
            L D+I   + DL NQRV+RVDA+RTR ++  FR+EE +L + RLLTFYC+   I Y+QG+NEVLAP +ML++                  +    D  V+ M      R  P ++  +D F  LQC+ R FRLLL YHDP L + LD +   PEL+ATPW +TLFAR+ P + ++ LWD  LL+
Sbjct:  911 LDDSIRDTKQDLENQRVIRVDAQRTRADVEIFRTEEMQLLVSRLLTFYCKRKGIKYKQGLNEVLAPFIMLRR------------------DPPLPDGTVFNMFYAFIERFLPHSFVHED-FHALQCSFRLFRLLLLYHDPELCNFLDTHSLSPELYATPWFLTLFARNVPLKVLYQLWDTYLLE 1075          
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A0P1AH99_PLAHL (TBC1 domain family member 23 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AH99_PLAHL)

HSP 1 Score: 148 bits (373), Expect = 7.250e-38
Identity = 81/185 (43.78%), Postives = 108/185 (58.38%), Query Frame = 0
Query:    1 HLVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 185
            +L  +I  +E DL NQRV+  DA RTR   P F++ E    + +LLT+YC+   I Y+QGMNEVLAP L+L +   G             EE    + +V+     +  R  P  +  D +F  LQC+L+ FRLL+ YHDP L   LDQ+D  PEL+ TPW +TLFARS PP  VF LWD+ LL+
Sbjct:   78 NLDQSILQVEEDLDNQRVIAADAVRTRSNEPRFQASETVELVVKLLTYYCKCRNIRYKQGMNEVLAPFLLLTERKDGFN-----------EETPLAEGVVFQCFYALIDRFLPHMFI-DKEFQSLQCSLQLFRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPETVFYLWDFFLLE 250          
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A8J4SIU0_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora kernoviae 00238/432 TaxID=1284355 RepID=A0A8J4SIU0_9STRA)

HSP 1 Score: 141 bits (356), Expect = 7.870e-38
Identity = 77/185 (41.62%), Postives = 107/185 (57.84%), Query Frame = 0
Query:    1 HLVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 185
            +L  +I  +E DL NQRV+  DA RTR   P F+  E    + +LLT+YC+  +I Y+QGMNEVLAP L+L +  +G K           E     + +V+     +  +  P  +  D +F  LQC+ + +RLL+ YHDP L   LDQ+D  PEL+ TPW +TLFAR  PP  VF LWD+ LL+
Sbjct:   43 NLDQSILQVEEDLDNQRVIAADASRTRGNEPRFKQPETVELVIKLLTYYCKCRSIQYKQGMNEVLAPFLLLTEQREGSK-----------ESVPLAEGVVFQCFYALIDKFLPHVFV-DREFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARLLPPEFVFYLWDFFLLE 215          
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A662Y260_9STRA (TBC1 domain family member 23 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y260_9STRA)

HSP 1 Score: 146 bits (368), Expect = 3.530e-37
Identity = 80/184 (43.48%), Postives = 109/184 (59.24%), Query Frame = 0
Query:    2 LVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 185
            L  +I  +E DL+NQRV+  DA RTR   P F+  E    + +LLT+YC+  +I Y+QGMNEVLAP L+L +  +G            EE     + +V+     +  R  P  +A D +F  LQC+ + +RLL+ YHDP L   LDQ+D  PEL+ TPW +TLFARS PP  VF LWD+ LL+
Sbjct: 1251 LDQSILRVEEDLANQRVISADASRTRGNEPRFQQPETVELVTKLLTYYCKCRSIRYKQGMNEVLAPFLLLTEEREGS-----------EEPVPLAEGVVFQCFYALIDRFLPHVFA-DREFRSLQCSFQLYRLLMLYHDPELCHFLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLE 1422          
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A7S2W2Q6_9STRA (TBC1 domain family member 23 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W2Q6_9STRA)

HSP 1 Score: 145 bits (367), Expect = 4.120e-37
Identity = 82/184 (44.57%), Postives = 107/184 (58.15%), Query Frame = 0
Query:    2 LVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 185
            L D+I   + DL NQRV+RVDAERTR +L  FR+ E +L + +LLTFYC+   I Y+QG+NEVLAP L+L+                   +    D  ++ M      +     Y  +D F  LQC  R FRLLLQYHDP L + LD ++  PEL+ATPW +TLFARS P   +F LWD  LL+
Sbjct:  143 LDDSIRDTKQDLENQRVIRVDAERTRADLAEFRTPEMQLLVSKLLTFYCKRKNIKYKQGLNEVLAPFLILRT------------------DPPLPDGTIFNMYYAFIEKYLRHIYVHED-FHALQCTFRLFRLLLQYHDPELCNHLDTHNLSPELYATPWFLTLFARSVPINVLFRLWDTYLLE 307          
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A2P4Y4U0_9STRA (TBC1 domain family member 23 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y4U0_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.090e-36
Identity = 78/184 (42.39%), Postives = 107/184 (58.15%), Query Frame = 0
Query:    2 LVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 185
            L  +I  +E DL NQRV+  DA RTR   P F+  E    + +LLT+YC+  +I Y+QGMNEVLAP L+L +  +G +D                + +V+     +  R  P  +  D +F  LQC+ + +RLL+ YHDP L   LDQ+D  PEL+ TPW +TLFARS PP  VF LWD+ LL+
Sbjct:  143 LDQSILQVEEDLDNQRVIAADAARTRGNEPRFQQPETVELVVKLLTYYCKCRSIRYKQGMNEVLAPFLLLTEQREGCED-----------RVPLAEGVVFQCFYALIDRFLPHVFV-DKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEIVFYLWDFFLLE 314          
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: D0MUB2_PHYIT (TBC1 domain family member 23 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MUB2_PHYIT)

HSP 1 Score: 143 bits (361), Expect = 2.970e-36
Identity = 79/185 (42.70%), Postives = 106/185 (57.30%), Query Frame = 0
Query:    1 HLVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 185
            +L  +I  +E DL NQRVV  DA RTR   P F+  E    + +LLT+YC+  +I Y+QGMNEVLAP L+L +   G             E     +  V+     +  +L P  +  D +F  LQC+ + +RLL+ YHDP L   LDQ+D  PEL+ TPW +TLFARS PP  VF LWD+ LL+
Sbjct:  112 NLDQSIRQVEEDLDNQRVVAADAARTRGNEPRFQQPETVELVVKLLTYYCKRRSIQYKQGMNEVLAPFLLLTEQRDGAP-----------ERTPLAEGAVFQCFYALIDKLLPHVFV-DKEFRSLQCSFQLYRLLMLYHDPALCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLE 284          
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A2D4C669_PYTIN (TBC1 domain family member 23 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C669_PYTIN)

HSP 1 Score: 143 bits (360), Expect = 4.030e-36
Identity = 81/190 (42.63%), Postives = 113/190 (59.47%), Query Frame = 0
Query:    1 HLVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLK-----KPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 185
            HLV +I  +  DL NQ+VV  DA RTR +   FR ++   RI ++LT+YC+S  I Y+QGMNEVLAP LML+         G+  GD    T    E    D ++Y +   +  +  P  +  D +F  LQC+ + +RLL++YHDP L + LDQ+   PEL+ TPW +TLFARS P   V +LWD+ +LQ
Sbjct:  158 HLVSSIDKVVQDLPNQKVVAADACRTRAQDEHFRQQDTVDRITKILTYYCKSRNIKYKQGMNEVLAPFLMLEVSEHESEKHGMAHGDSYEGTSAIPE--IDDAVIYQLFYALIDKYMPHVFV-DHEFKSLQCSFQLYRLLMRYHDPMLCNYLDQHAMTPELYVTPWFMTLFARSLPRDIVLVLWDFFILQ 344          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DSP9_CAFRO2.910e-4350.00TBC1 domain family member 23 n=2 Tax=Cafeteria roe... [more]
A0A5A8E0D2_CAFRO3.090e-4350.00TBC1 domain family member 23 n=3 Tax=Cafeteria roe... [more]
A0A2R5GE11_9STRA1.560e-3844.02TBC1 domain family member 23 n=1 Tax=Hondaea ferme... [more]
A0A0P1AH99_PLAHL7.250e-3843.78TBC1 domain family member 23 n=1 Tax=Plasmopara ha... [more]
A0A8J4SIU0_9STRA7.870e-3841.62Rab-GAP TBC domain-containing protein n=1 Tax=Phyt... [more]
A0A662Y260_9STRA3.530e-3743.48TBC1 domain family member 23 n=1 Tax=Nothophytopht... [more]
A0A7S2W2Q6_9STRA4.120e-3744.57TBC1 domain family member 23 n=1 Tax=labyrinthulid... [more]
A0A2P4Y4U0_9STRA2.090e-3642.39TBC1 domain family member 23 (Fragment) n=1 Tax=Ph... [more]
D0MUB2_PHYIT2.970e-3642.70TBC1 domain family member 23 n=1 Tax=Phytophthora ... [more]
A0A2D4C669_PYTIN4.030e-3642.63TBC1 domain family member 23 n=1 Tax=Pythium insid... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.80coord: 122..185
e-value: 3.2E-14
score: 54.7
NoneNo IPR availableGENE3D1.10.8.270coord: 5..117
e-value: 3.6E-5
score: 25.4
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 15..184
e-value: 7.8E-23
score: 81.3
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..185
score: 19.482
IPR039755TBC1 domain family member 23PANTHERPTHR13297UNCHARACTERIZEDcoord: 15..185
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 11..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89624contigM-pyrifera_M_contig89624:83..736 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89624.20781.1mRNA_M-pyrifera_M_contig89624.20781.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig89624 83..736 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig89624.20781.1 ID=prot_M-pyrifera_M_contig89624.20781.1|Name=mRNA_M-pyrifera_M_contig89624.20781.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp
HLVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYC
RSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIV
YAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQN
DCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR039755TBC1D23
IPR035969Rab-GTPase_TBC_sf