mRNA_M-pyrifera_M_contig89624.20781.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A5A8DSP9_CAFRO (TBC1 domain family member 23 n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DSP9_CAFRO) HSP 1 Score: 163 bits (413), Expect = 2.910e-43 Identity = 92/184 (50.00%), Postives = 119/184 (64.67%), Query Frame = 1 Query: 4 LVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 555 L +AI+ E LSN+RV+RVD +RTRQ + F+S+E K R+ RLL+F+C+ A PYRQG+NEV+APLL+L G DG+ K E D V+ +LQ + T PAAY DDDFVGLQC+L + RLLL +HDP L+ L Q+ PELFATPW+ TL AR V+ LWD L+L Sbjct: 60 LSEAIASGEATLSNKRVLRVDCDRTRQTVAAFQSDEGKARLARLLSFFCKCQATPYRQGLNEVVAPLLLL-----GA-DGEAECAAGKLTE--LSDSAVHRLLQGMVTTFLPAAYGADDDFVGLQCSLEYVRLLLVFHDPELARILQQHSVTPELFATPWLFTLLARGHSLPVVYSLWDSLVLH 235
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A5A8E0D2_CAFRO (TBC1 domain family member 23 n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E0D2_CAFRO) HSP 1 Score: 163 bits (413), Expect = 3.090e-43 Identity = 92/184 (50.00%), Postives = 119/184 (64.67%), Query Frame = 1 Query: 4 LVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 555 L +AI+ E LSN+RV+RVD +RTRQ + F+S+E K R+ RLL+F+C+ A PYRQG+NEV+APLL+L G DG+ K E D V+ +LQ + T PAAY DDDFVGLQC+L + RLLL +HDP L+ L Q+ PELFATPW+ TL AR V+ LWD L+L Sbjct: 781 LSEAIASGEATLSNKRVLRVDCDRTRQTVAAFQSDEGKARLARLLSFFCKCQATPYRQGLNEVVAPLLLL-----GA-DGEAECAAGKLTE--LSDSAVHRLLQGMVTTFLPAAYGADDDFVGLQCSLEYVRLLLVFHDPELARILQQHSVTPELFATPWLFTLLARGHSLPVVYSLWDSLVLH 956
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A2R5GE11_9STRA (TBC1 domain family member 23 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GE11_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.560e-38 Identity = 81/184 (44.02%), Postives = 111/184 (60.33%), Query Frame = 1 Query: 4 LVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 555 L D+I + DL NQRV+RVDA+RTR ++ FR+EE +L + RLLTFYC+ I Y+QG+NEVLAP +ML++ + D V+ M R P ++ +D F LQC+ R FRLLL YHDP L + LD + PEL+ATPW +TLFAR+ P + ++ LWD LL+ Sbjct: 911 LDDSIRDTKQDLENQRVIRVDAQRTRADVEIFRTEEMQLLVSRLLTFYCKRKGIKYKQGLNEVLAPFIMLRR------------------DPPLPDGTVFNMFYAFIERFLPHSFVHED-FHALQCSFRLFRLLLLYHDPELCNFLDTHSLSPELYATPWFLTLFARNVPLKVLYQLWDTYLLE 1075
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A0P1AH99_PLAHL (TBC1 domain family member 23 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AH99_PLAHL) HSP 1 Score: 148 bits (373), Expect = 7.250e-38 Identity = 81/185 (43.78%), Postives = 108/185 (58.38%), Query Frame = 1 Query: 1 HLVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 555 +L +I +E DL NQRV+ DA RTR P F++ E + +LLT+YC+ I Y+QGMNEVLAP L+L + G EE + +V+ + R P + D +F LQC+L+ FRLL+ YHDP L LDQ+D PEL+ TPW +TLFARS PP VF LWD+ LL+ Sbjct: 78 NLDQSILQVEEDLDNQRVIAADAVRTRSNEPRFQASETVELVVKLLTYYCKCRNIRYKQGMNEVLAPFLLLTERKDGFN-----------EETPLAEGVVFQCFYALIDRFLPHMFI-DKEFQSLQCSLQLFRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPETVFYLWDFFLLE 250
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A8J4SIU0_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora kernoviae 00238/432 TaxID=1284355 RepID=A0A8J4SIU0_9STRA) HSP 1 Score: 141 bits (356), Expect = 7.870e-38 Identity = 77/185 (41.62%), Postives = 107/185 (57.84%), Query Frame = 1 Query: 1 HLVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 555 +L +I +E DL NQRV+ DA RTR P F+ E + +LLT+YC+ +I Y+QGMNEVLAP L+L + +G K E + +V+ + + P + D +F LQC+ + +RLL+ YHDP L LDQ+D PEL+ TPW +TLFAR PP VF LWD+ LL+ Sbjct: 43 NLDQSILQVEEDLDNQRVIAADASRTRGNEPRFKQPETVELVIKLLTYYCKCRSIQYKQGMNEVLAPFLLLTEQREGSK-----------ESVPLAEGVVFQCFYALIDKFLPHVFV-DREFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARLLPPEFVFYLWDFFLLE 215
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A662Y260_9STRA (TBC1 domain family member 23 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y260_9STRA) HSP 1 Score: 146 bits (368), Expect = 3.530e-37 Identity = 80/184 (43.48%), Postives = 109/184 (59.24%), Query Frame = 1 Query: 4 LVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 555 L +I +E DL+NQRV+ DA RTR P F+ E + +LLT+YC+ +I Y+QGMNEVLAP L+L + +G EE + +V+ + R P +A D +F LQC+ + +RLL+ YHDP L LDQ+D PEL+ TPW +TLFARS PP VF LWD+ LL+ Sbjct: 1251 LDQSILRVEEDLANQRVISADASRTRGNEPRFQQPETVELVTKLLTYYCKCRSIRYKQGMNEVLAPFLLLTEEREGS-----------EEPVPLAEGVVFQCFYALIDRFLPHVFA-DREFRSLQCSFQLYRLLMLYHDPELCHFLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLE 1422
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A7S2W2Q6_9STRA (TBC1 domain family member 23 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W2Q6_9STRA) HSP 1 Score: 145 bits (367), Expect = 4.120e-37 Identity = 82/184 (44.57%), Postives = 107/184 (58.15%), Query Frame = 1 Query: 4 LVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 555 L D+I + DL NQRV+RVDAERTR +L FR+ E +L + +LLTFYC+ I Y+QG+NEVLAP L+L+ + D ++ M + Y +D F LQC R FRLLLQYHDP L + LD ++ PEL+ATPW +TLFARS P +F LWD LL+ Sbjct: 143 LDDSIRDTKQDLENQRVIRVDAERTRADLAEFRTPEMQLLVSKLLTFYCKRKNIKYKQGLNEVLAPFLILRT------------------DPPLPDGTIFNMYYAFIEKYLRHIYVHED-FHALQCTFRLFRLLLQYHDPELCNHLDTHNLSPELYATPWFLTLFARSVPINVLFRLWDTYLLE 307
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A2P4Y4U0_9STRA (TBC1 domain family member 23 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y4U0_9STRA) HSP 1 Score: 144 bits (362), Expect = 2.090e-36 Identity = 78/184 (42.39%), Postives = 107/184 (58.15%), Query Frame = 1 Query: 4 LVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 555 L +I +E DL NQRV+ DA RTR P F+ E + +LLT+YC+ +I Y+QGMNEVLAP L+L + +G +D + +V+ + R P + D +F LQC+ + +RLL+ YHDP L LDQ+D PEL+ TPW +TLFARS PP VF LWD+ LL+ Sbjct: 143 LDQSILQVEEDLDNQRVIAADAARTRGNEPRFQQPETVELVVKLLTYYCKCRSIRYKQGMNEVLAPFLLLTEQREGCED-----------RVPLAEGVVFQCFYALIDRFLPHVFV-DKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEIVFYLWDFFLLE 314
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: D0MUB2_PHYIT (TBC1 domain family member 23 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MUB2_PHYIT) HSP 1 Score: 143 bits (361), Expect = 2.970e-36 Identity = 79/185 (42.70%), Postives = 106/185 (57.30%), Query Frame = 1 Query: 1 HLVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLKKPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 555 +L +I +E DL NQRVV DA RTR P F+ E + +LLT+YC+ +I Y+QGMNEVLAP L+L + G E + V+ + +L P + D +F LQC+ + +RLL+ YHDP L LDQ+D PEL+ TPW +TLFARS PP VF LWD+ LL+ Sbjct: 112 NLDQSIRQVEEDLDNQRVVAADAARTRGNEPRFQQPETVELVVKLLTYYCKRRSIQYKQGMNEVLAPFLLLTEQRDGAP-----------ERTPLAEGAVFQCFYALIDKLLPHVFV-DKEFRSLQCSFQLYRLLMLYHDPALCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLE 284
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Match: A0A2D4C669_PYTIN (TBC1 domain family member 23 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C669_PYTIN) HSP 1 Score: 143 bits (360), Expect = 4.030e-36 Identity = 81/190 (42.63%), Postives = 113/190 (59.47%), Query Frame = 1 Query: 1 HLVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCRSHAIPYRQGMNEVLAPLLMLK-----KPSKGVKDGDETVETRKEEEDTFGDDIVYAMLQRVATRLAPAAYAEDDDFVGLQCALRFFRLLLQYHDPTLSSCLDQNDCPPELFATPWIVTLFARSTPPRAVFLLWDWLLLQ 555 HLV +I + DL NQ+VV DA RTR + FR ++ RI ++LT+YC+S I Y+QGMNEVLAP LML+ G+ GD T E D ++Y + + + P + D +F LQC+ + +RLL++YHDP L + LDQ+ PEL+ TPW +TLFARS P V +LWD+ +LQ Sbjct: 158 HLVSSIDKVVQDLPNQKVVAADACRTRAQDEHFRQQDTVDRITKILTYYCKSRNIKYKQGMNEVLAPFLMLEVSEHESEKHGMAHGDSYEGTSAIPE--IDDAVIYQLFYALIDKYMPHVFV-DHEFKSLQCSFQLYRLLMRYHDPMLCNYLDQHAMTPELYVTPWFMTLFARSLPRDIVLVLWDFFILQ 344 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89624.20781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89624.20781.1 >prot_M-pyrifera_M_contig89624.20781.1 ID=prot_M-pyrifera_M_contig89624.20781.1|Name=mRNA_M-pyrifera_M_contig89624.20781.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp HLVDAISGIELDLSNQRVVRVDAERTRQELPPFRSEERKLRIQRLLTFYCback to top mRNA from alignment at M-pyrifera_M_contig89624:83..736- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89624.20781.1 ID=mRNA_M-pyrifera_M_contig89624.20781.1|Name=mRNA_M-pyrifera_M_contig89624.20781.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig89624:83..736- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89624:83..736- >mRNA_M-pyrifera_M_contig89624.20781.1 ID=mRNA_M-pyrifera_M_contig89624.20781.1|Name=mRNA_M-pyrifera_M_contig89624.20781.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig89624:83..736- (Macrocystis pyrifera P11B4 male)back to top |