mRNA_M-pyrifera_M_contig89546.20759.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89546.20759.1
Unique NamemRNA_M-pyrifera_M_contig89546.20759.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig89546.20759.1 vs. uniprot
Match: H3H453_PHYRM (Cathepsin X n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H453_PHYRM)

HSP 1 Score: 154 bits (388), Expect = 1.330e-41
Identity = 75/158 (47.47%), Postives = 102/158 (64.56%), Query Frame = 1 
Query:    1 IPDETCQFYTASNPDSPTCSAMNVCKTCHPVSGNFSPGVCEPVLKFPNYKASQVGNLDDPDKIKAEVYARGPVAATMYVTSRFENYQSGIYSEDVGPNPPLNHEVSIVGFGTNGSED--YWIVRNSWGDAWGEHGFFYITTDVDKNLGITTNCDFAVP 468
            IPD+TCQ Y A+N D   C    +C+TC P   +F+PGVCEP+ KF  Y  S+ G++   D++KAE+Y RGP+   ++ T +FE+Y  GIYSE V   P +NHE+S+ G+G +   D  YWI RNSWG  WGE+G+F I      NLGI  +CD+ VP
Sbjct:  286 IPDQTCQAYQATNLD---CDQFAICETCWPSKESFTPGVCEPIKKFAKYFVSEYGSVSGADRMKAEIYKRGPIGCGVHATEKFESYTGGIYSEHV-MFPLINHEISVAGWGYDEETDTEYWIGRNSWGTYWGENGWFRIQMH-HNNLGIEQDCDWGVP 438
[Close]
BLAST of mRNA_M-pyrifera_M_contig89546.20759.1 vs. uniprot
Match: H6S475_PLAVT (Cathepsin X (Fragment) n=1 Tax=Plasmopara viticola TaxID=143451 RepID=H6S475_PLAVT)

HSP 1 Score: 150 bits (378), Expect = 2.300e-41
Identity = 74/158 (46.84%), Postives = 101/158 (63.92%), Query Frame = 1 
Query:    1 IPDETCQFYTASNPDSPTCSAMNVCKTCHPVSGNFSPGVCEPVLKFPNYKASQVGNLDDPDKIKAEVYARGPVAATMYVTSRFENYQSGIYSEDVGPNPPLNHEVSIVGFGTN--GSEDYWIVRNSWGDAWGEHGFFYITTDVDKNLGITTNCDFAVP 468
            IPD+TCQ Y A N     C    +C+TC P + +F+PGVCE + KF  Y  S+ G++   D++KAE+Y RGP+   ++ TS+FE+Y  GIYSE V   P +NHE+S+VG+G +     +YWI RNSWG  WGE+G+F I      NLGI   CD+ VP
Sbjct:  140 IPDQTCQAYQAKNLQ---CDQFAICETCWPSNKSFTPGVCESIPKFTKYYVSEYGSVSGADRMKAEIYKRGPIGCGVHATSKFESYTGGIYSERVMI-PLINHEISVVGWGYDEESETEYWIGRNSWGTYWGENGWFRIKMH-HNNLGIEQECDWGVP 292
[Close]
BLAST of mRNA_M-pyrifera_M_contig89546.20759.1 vs. uniprot
Match: A0A024UD75_9STRA (Cathepsin X n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UD75_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.560e-41
Identity = 78/158 (49.37%), Postives = 104/158 (65.82%), Query Frame = 1 
Query:    1 IPDETCQFYTASNPDSPTCSAMNVCKTCHPVSGNFSPGVCEPVLKFPNYKASQVGNLDDPDKIKAEVYARGPVAATMYVTSRFENYQSGIYSEDVGPNPPLNHEVSIVGFG--TNGSEDYWIVRNSWGDAWGEHGFFYITTDVDKNLGITTNCDFAVP 468
            IPD+TCQ Y A +    TCSA+N+C+TC P + +F+PG C  V  F +Y  S+ G++   D+IKAE+Y RGPV   M+VT +FE Y  GIYSE+V   P  NHE+S+ G+G   +   +YWI RNSWG  WGEHG+F I      NLGI ++CD+ VP
Sbjct:  467 IPDQTCQAYQAKDD---TCSALNICETCWPTNSSFTPGECRVVPAFKSYYVSEYGHVRGADRIKAEIYKRGPVGCGMHVTDKFEAYSGGIYSENV-LFPIPNHEISVAGWGFDEDTQTEYWIGRNSWGTYWGEHGWFRIQMH-HHNLGIESDCDWGVP 619
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BLAST of mRNA_M-pyrifera_M_contig89546.20759.1 vs. uniprot
Match: A0A6G0XM24_9STRA (Cathepsin X n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XM24_9STRA)

HSP 1 Score: 154 bits (388), Expect = 7.680e-41
Identity = 78/159 (49.06%), Postives = 106/159 (66.67%), Query Frame = 1 
Query:    1 IPDETCQFYTASNPDSPTCSAMNVCKTCHPVSGNFSPGVCEPVLKFPNYKASQVGNLDDPDKIKAEVYARGPVAATMYVTSRFENYQSGIYSEDV-GPNPPLNHEVSIVGFGTNGSE--DYWIVRNSWGDAWGEHGFFYITTDVDKNLGITTNCDFAVP 468
            IPD+TCQ Y A +    TCSA+NVC+TC P + +F+PG C  V  F +Y  S+ G++   D++KAE+Y RGP+   ++ T +FE Y  GIYSE+V  P P  NHE+S+VG+G + S   +YWI RNSWG  WGEHG+F I      NLGI ++CD+ VP
Sbjct:  447 IPDQTCQAYQAKDG---TCSALNVCETCWPTNASFTPGECRVVETFNSYYVSEYGHVSGADRMKAEIYKRGPIGCGVHATDKFEAYTGGIYSENVLFPFP--NHEISVVGWGVDESTGTEYWIGRNSWGTYWGEHGWFRIQMH-HHNLGIESDCDWGVP 599
[Close]
BLAST of mRNA_M-pyrifera_M_contig89546.20759.1 vs. uniprot
Match: H3GME1_PHYRM (Cathepsin X n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GME1_PHYRM)

HSP 1 Score: 154 bits (388), Expect = 1.000e-40
Identity = 75/158 (47.47%), Postives = 102/158 (64.56%), Query Frame = 1 
Query:    1 IPDETCQFYTASNPDSPTCSAMNVCKTCHPVSGNFSPGVCEPVLKFPNYKASQVGNLDDPDKIKAEVYARGPVAATMYVTSRFENYQSGIYSEDVGPNPPLNHEVSIVGFGTNGSED--YWIVRNSWGDAWGEHGFFYITTDVDKNLGITTNCDFAVP 468
            IPD+TCQ Y A+N D   C    +C+TC P   +F+PGVCEP+ KF  Y  S+ G++   D++KAE+Y RGP+   ++ T +FE+Y  GIYSE V   P +NHE+S+ G+G +   D  YWI RNSWG  WGE+G+F I      NLGI  +CD+ VP
Sbjct:  450 IPDQTCQAYQATNLD---CDQFAICETCWPSKESFTPGVCEPIKKFAKYFVSEYGSVSGADRMKAEIYKRGPIGCGVHATEKFESYTGGIYSEHV-MFPLINHEISVAGWGYDEETDTEYWIGRNSWGTYWGENGWFRIQMH-HNNLGIEQDCDWGVP 602
[Close]
BLAST of mRNA_M-pyrifera_M_contig89546.20759.1 vs. uniprot
Match: A0A0W8CD52_PHYNI (Cathepsin X n=4 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CD52_PHYNI)

HSP 1 Score: 153 bits (386), Expect = 5.210e-40
Identity = 75/158 (47.47%), Postives = 101/158 (63.92%), Query Frame = 1 
Query:    1 IPDETCQFYTASNPDSPTCSAMNVCKTCHPVSGNFSPGVCEPVLKFPNYKASQVGNLDDPDKIKAEVYARGPVAATMYVTSRFENYQSGIYSEDVGPNPPLNHEVSIVGFGTNGSED--YWIVRNSWGDAWGEHGFFYITTDVDKNLGITTNCDFAVP 468
            IPD+TCQ Y A N     C    +C+TC P   +F+PGVCEP+ KF  Y  S+ G++   D++KAE+Y RGP+   ++ TS+FE+Y  GIYSE V   P +NHE+S+ G+G +   D  YWI RNSWG  WGE+G+F I      NLGI  +CD+ VP
Sbjct:  449 IPDQTCQAYQAKNLQ---CDQFAICETCWPSKESFTPGVCEPIKKFAKYYVSEYGSVSGADRMKAEIYKRGPIGCGVHATSKFESYTGGIYSEHV-MFPLINHEISVAGWGYDEDTDTEYWIGRNSWGTYWGENGWFRIQMH-HNNLGIEQDCDWGVP 601
[Close]
BLAST of mRNA_M-pyrifera_M_contig89546.20759.1 vs. uniprot
Match: D0MWA1_PHYIT (Cathepsin X n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MWA1_PHYIT)

HSP 1 Score: 151 bits (382), Expect = 1.130e-39
Identity = 74/158 (46.84%), Postives = 101/158 (63.92%), Query Frame = 1 
Query:    1 IPDETCQFYTASNPDSPTCSAMNVCKTCHPVSGNFSPGVCEPVLKFPNYKASQVGNLDDPDKIKAEVYARGPVAATMYVTSRFENYQSGIYSEDVGPNPPLNHEVSIVGFGTNGSED--YWIVRNSWGDAWGEHGFFYITTDVDKNLGITTNCDFAVP 468
            IPD+TCQ Y A N     C    +C+TC P   +F+PGVCEP+ KF  Y  S+ G++   +++KAE+Y RGP+   ++ TS+FE+Y  GIYSE V   P +NHE+S+ G+G +   D  YWI RNSWG  WGE+G+F I      NLGI  +CD+ VP
Sbjct:  449 IPDQTCQAYQAKNLQ---CDQFAICETCWPSKESFTPGVCEPIKKFAKYYVSEYGSVSGAERMKAEIYKRGPIGCGVHATSKFESYTGGIYSEHV-MFPLINHEISVAGWGYDEETDTEYWIGRNSWGTYWGENGWFRIQMH-HNNLGIEQDCDWGVP 601
[Close]
BLAST of mRNA_M-pyrifera_M_contig89546.20759.1 vs. uniprot
Match: G4YQU9_PHYSP (Cathepsin X n=14 Tax=Phytophthora TaxID=4783 RepID=G4YQU9_PHYSP)

HSP 1 Score: 150 bits (379), Expect = 2.000e-39
Identity = 74/158 (46.84%), Postives = 99/158 (62.66%), Query Frame = 1 
Query:    1 IPDETCQFYTASNPDSPTCSAMNVCKTCHPVSGNFSPGVCEPVLKFPNYKASQVGNLDDPDKIKAEVYARGPVAATMYVTSRFENYQSGIYSEDVGPNPPLNHEVSIVGFGTNGSED--YWIVRNSWGDAWGEHGFFYITTDVDKNLGITTNCDFAVP 468
            IPD+TCQ Y A N     C    +C+TC P   +F+PGVCEP+ KF  Y  S+ G++   D++KAE+Y RGP+   ++ T +FE Y  GIYSE V   P +NHE+S+ G+G +   D  YWI RNSWG  WGE+G+F I      NLGI  +CD+ VP
Sbjct:  458 IPDQTCQAYQAKNLQ---CDQFAICETCWPSKESFTPGVCEPIKKFAKYYVSEYGSVSGADRMKAEIYKRGPIGCGVHATEKFEAYTGGIYSEHV-MFPLINHEISVAGWGYDEETDTEYWIGRNSWGTYWGENGWFRIQMH-HNNLGIEQDCDWGVP 610
[Close]
BLAST of mRNA_M-pyrifera_M_contig89546.20759.1 vs. uniprot
Match: A0A1R2B9M1_9CILI (Cathepsin X n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B9M1_9CILI)

HSP 1 Score: 149 bits (377), Expect = 2.510e-39
Identity = 75/158 (47.47%), Postives = 99/158 (62.66%), Query Frame = 1 
Query:    1 IPDETCQFYTASNPDSPTCSAMNVCKTCH-PVSGNFSPGVCEPVLKFPNYKASQVGNLDDPDKIKAEVYARGPVAATMYVTSRFENYQSGIYSEDVGPNPPLNHEVSIVGFGTNGSEDYWIVRNSWGDAWGEHGFFYITTDVDKNLGITTNCDFAVPD 471
            IPD+TCQ Y A NP   +CSA+ VC+TC  PV       V  P L +    ASQ G +     +KAE+Y  GP+   +  T + ENY  GI+S+ + P P +NHEV++VG+G+   EDYWIVRNSWG  WGE GFF +  + D NLGIT +CD+ +PD
Sbjct:  443 IPDDTCQQYIAKNPSHYSCSAIQVCETCTGPVGSQTCTAVSNPKLWY----ASQYGKVSGAANMKAEIYKNGPIGCGIEATEQLENYTGGIFSQFI-PYPRINHEVAVVGWGSENGEDYWIVRNSWGTFWGERGFFRLKMNSD-NLGITLDCDWGIPD 594
[Close]
BLAST of mRNA_M-pyrifera_M_contig89546.20759.1 vs. uniprot
Match: A0A421GY53_9STRA (Cathepsin X n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GY53_9STRA)

HSP 1 Score: 150 bits (379), Expect = 4.070e-39
Identity = 74/158 (46.84%), Postives = 100/158 (63.29%), Query Frame = 1 
Query:    1 IPDETCQFYTASNPDSPTCSAMNVCKTCHPVSGNFSPGVCEPVLKFPNYKASQVGNLDDPDKIKAEVYARGPVAATMYVTSRFENYQSGIYSEDVGPNPPLNHEVSIVGFGTNGSED--YWIVRNSWGDAWGEHGFFYITTDVDKNLGITTNCDFAVP 468
            IPD+TCQ Y A+N     C    VC+TC P   +F+PGVCEP+ KF  Y  ++ G++   D++KAE+Y RGP+   ++ T +FE Y  GIYSE V   P +NHE+S+ G+G +   D  YWI RNSWG  WGE+G+F I      NLGI  +CD+ VP
Sbjct:  421 IPDQTCQAYQATNLK---CDQFAVCETCWPSKSSFTPGVCEPIKKFAKYYVTEYGSVSGADRMKAEIYKRGPIGCGVHATEKFEAYVGGIYSEHV-MFPLINHEISVAGWGYDEETDTEYWIGRNSWGTYWGENGWFRIAMH-HNNLGIEQDCDWGVP 573
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89546.20759.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3H453_PHYRM1.330e-4147.47Cathepsin X n=1 Tax=Phytophthora ramorum TaxID=164... [more]
H6S475_PLAVT2.300e-4146.84Cathepsin X (Fragment) n=1 Tax=Plasmopara viticola... [more]
A0A024UD75_9STRA2.560e-4149.37Cathepsin X n=2 Tax=Aphanomyces invadans TaxID=157... [more]
A0A6G0XM24_9STRA7.680e-4149.06Cathepsin X n=1 Tax=Aphanomyces euteiches TaxID=10... [more]
H3GME1_PHYRM1.000e-4047.47Cathepsin X n=1 Tax=Phytophthora ramorum TaxID=164... [more]
A0A0W8CD52_PHYNI5.210e-4047.47Cathepsin X n=4 Tax=Phytophthora TaxID=4783 RepID=... [more]
D0MWA1_PHYIT1.130e-3946.84Cathepsin X n=1 Tax=Phytophthora infestans (strain... [more]
G4YQU9_PHYSP2.000e-3946.84Cathepsin X n=14 Tax=Phytophthora TaxID=4783 RepID... [more]
A0A1R2B9M1_9CILI2.510e-3947.47Cathepsin X n=1 Tax=Stentor coeruleus TaxID=5963 R... [more]
A0A421GY53_9STRA4.070e-3946.84Cathepsin X n=3 Tax=Phytophthora kernoviae TaxID=3... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89546contigM-pyrifera_M_contig89546:2..602 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score156.4
Seed ortholog evalue1.2e-35
Seed eggNOG ortholog157072.XP_008867807.1
Preferred nameCTSZ
KEGG koko:K08568
KEGG Pathwayko04142,ko04210,map04142,map04210
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0001763,GO:0001775,GO:0001990,GO:0001991,GO:0002002,GO:0002003,GO:0002009,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003008,GO:0003013,GO:0003044,GO:0003073,GO:0003081,GO:0003674,GO:0003824,GO:0004175,GO:0004180,GO:0004197,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0005783,GO:0005788,GO:0005793,GO:0005798,GO:0005886,GO:0005938,GO:0006508,GO:0006518,GO:0006807,GO:0006810,GO:0006887,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006955,GO:0006996,GO:0007275,GO:0007399,GO:0008015,GO:0008150,GO:0008152,GO:0008217,GO:0008233,GO:0008234,GO:0008238,GO:0008284,GO:0009056,GO:0009057,GO:0009653,GO:0009887,GO:0009888,GO:0009892,GO:0009986,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0010721,GO:0010755,GO:0010757,GO:0010817,GO:0010941,GO:0010942,GO:0010955,GO:0010975,GO:0010977,GO:0012505,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016485,GO:0016486,GO:0016787,GO:0019222,GO:0019538,GO:0022008,GO:0022607,GO:0030134,GO:0030135,GO:0030141,GO:0030154,GO:0030162,GO:0030163,GO:0030323,GO:0030324,GO:0030424,GO:0030426,GO:0030427,GO:0031090,GO:0031323,GO:0031324,GO:0031344,GO:0031345,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032091,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032940,GO:0033116,GO:0033267,GO:0034641,GO:0034774,GO:0035239,GO:0035295,GO:0035580,GO:0036230,GO:0042119,GO:0042127,GO:0042445,GO:0042581,GO:0042981,GO:0042995,GO:0043005,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043393,GO:0043523,GO:0043525,GO:0043603,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044421,GO:0044422,GO:0044424,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044448,GO:0044463,GO:0044464,GO:0045055,GO:0045321,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0045861,GO:0046903,GO:0046907,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048699,GO:0048729,GO:0048731,GO:0048754,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050789,GO:0050793,GO:0050794,GO:0050886,GO:0050896,GO:0051093,GO:0051098,GO:0051100,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051603,GO:0051604,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051960,GO:0051961,GO:0060205,GO:0060255,GO:0060284,GO:0060425,GO:0060429,GO:0060441,GO:0060541,GO:0060562,GO:0061024,GO:0061138,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070011,GO:0070013,GO:0070613,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090114,GO:0097458,GO:0097708,GO:0098588,GO:0099503,GO:0099568,GO:0099738,GO:0101002,GO:0120025,GO:0120035,GO:0120038,GO:0140096,GO:0150034,GO:1901214,GO:1901216,GO:1901564,GO:1901565,GO:1901575,GO:1903317,GO:1903318,GO:1904813,GO:2000026,GO:2000177,GO:2000179
EggNOG free text desc.transferase activity, transferring glycosyl groups
EggNOG OGsCOG4870@1,KOG1543@2759
EC3.4.18.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Exons2
Model size489
Cds size489
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816806.0512648-CDS-M-pyrifera_M_contig89546:1..3721622816806.0512648-CDS-M-pyrifera_M_contig89546:1..372Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89546 2..372 +
1692278189.3598428-CDS-M-pyrifera_M_contig89546:1..3721692278189.3598428-CDS-M-pyrifera_M_contig89546:1..372Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89546 2..372 +
1622816806.0661845-CDS-M-pyrifera_M_contig89546:484..6021622816806.0661845-CDS-M-pyrifera_M_contig89546:484..602Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89546 485..602 +
1692278189.3744063-CDS-M-pyrifera_M_contig89546:484..6021692278189.3744063-CDS-M-pyrifera_M_contig89546:484..602Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89546 485..602 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89546.20759.1prot_M-pyrifera_M_contig89546.20759.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89546 2..602 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89546.20759.1

>prot_M-pyrifera_M_contig89546.20759.1 ID=prot_M-pyrifera_M_contig89546.20759.1|Name=mRNA_M-pyrifera_M_contig89546.20759.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp
IPDETCQFYTASNPDSPTCSAMNVCKTCHPVSGNFSPGVCEPVLKFPNYK
ASQVGNLDDPDKIKAEVYARGPVAATMYVTSRFENYQSGIYSEDVGPNPP
LNHEVSIVGFGTNGSEDYWIVRNSWGDAWGEHGFFYITTDVDKNLGITTN
CDFAVPDTSSLE*
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mRNA from alignment at M-pyrifera_M_contig89546:2..602+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89546.20759.1 ID=mRNA_M-pyrifera_M_contig89546.20759.1|Name=mRNA_M-pyrifera_M_contig89546.20759.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=601bp|location=Sequence derived from alignment at M-pyrifera_M_contig89546:2..602+ (Macrocystis pyrifera P11B4 male)
ATTCCAGATGAAACTTGCCAATTCTACACTGCTTCTAACCCAGATTCTCC
AACTTGCAGTGCAATGAACGTGTGCAAGACGTGCCATCCCGTGTCTGGCA
ACTTTTCTCCAGGTGTGTGTGAGCCAGTGTTGAAGTTCCCCAACTACAAG
GCTTCTCAAGTCGGAAACTTGGATGACCCAGACAAGATTAAGGCAGAAGT
GTACGCACGTGGACCAGTCGCTGCTACCATGTATGTCACCAGCCGTTTCG
AGAACTACCAATCTGGTATCTACAGTGAAGATGTCGGGCCAAACCCACCA
CTCAACCACGAAGTCTCCATCGTTGGATTCGGAACCAATGGATCCGAAGA
CTACTGGATTGTTCGCAACTCGTAAGTTTTGTTTTGTTTTCTTTTTGTCG
TTGGACGATGGGGAGGATATGGGGTTGTTGGGGATTGGATGGTGTTTTGT
TGTGTCAATTCTTCCTTTTGTTGTGTTGTGCAGATGGGGTGATGCTTGGG
GTGAACATGGTTTCTTCTACATCACTACCGATGTGGACAAGAACTTGGGA
ATCACCACGAACTGTGATTTCGCCGTCCCAGACACCTCCAGTCTCGAATA
A
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89546:2..602+

>mRNA_M-pyrifera_M_contig89546.20759.1 ID=mRNA_M-pyrifera_M_contig89546.20759.1|Name=mRNA_M-pyrifera_M_contig89546.20759.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=978bp|location=Sequence derived from alignment at M-pyrifera_M_contig89546:2..602+ (Macrocystis pyrifera P11B4 male)
ATTCCAGATGAAACTTGCCAATTCTACACTGCTTCTAACCCAGATTCTCC
AACTTGCAGTGCAATGAACGTGTGCAAGACGTGCCATCCCGTGTCTGGCA
ACTTTTCTCCAGGTGTGTGTGAGCCAGTGTTGAAGTTCCCCAACTACAAG
GCTTCTCAAGTCGGAAACTTGGATGACCCAGACAAGATTAAGGCAGAAGT
GTACGCACGTGGACCAGTCGCTGCTACCATGTATGTCACCAGCCGTTTCG
AGAACTACCAATCTGGTATCTACAGTGAAGATGTCGGGCCAAACCCACCA
CTCAACCACGAAGTCTCCATCGTTGGATTCGGAACCAATGGATCCGAAGA
CTACTGGATTGTTCGCAACTCATTCCAGATGAAACTTGCCAATTCTACAC
TGCTTCTAACCCAGATTCTCCAACTTGCAGTGCAATGAACGTGTGCAAGA
CGTGCCATCCCGTGTCTGGCAACTTTTCTCCAGGTGTGTGTGAGCCAGTG
TTGAAGTTCCCCAACTACAAGGCTTCTCAAGTCGGAAACTTGGATGACCC
AGACAAGATTAAGGCAGAAGTGTACGCACGTGGACCAGTCGCTGCTACCA
TGTATGTCACCAGCCGTTTCGAGAACTACCAATCTGGTATCTACAGTGAA
GATGTCGGGCCAAACCCACCACTCAACCACGAAGTCTCCATCGTTGGATT
CGGAACCAATGGATCCGAAGACTACTGGATTGTTCGCAACTCATGGGGTG
ATGCTTGGGGTGAACATGGTTTCTTCTACATCACTACCGATGTGGACAAG
AACTTGGGAATCACCACGAACTGTGATTTCGCCGTCCCAGACACCTCCAG
TCTCGAATAAATGGGGTGATGCTTGGGGTGAACATGGTTTCTTCTACATC
ACTACCGATGTGGACAAGAACTTGGGAATCACCACGAACTGTGATTTCGC
CGTCCCAGACACCTCCAGTCTCGAATAA
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