prot_M-pyrifera_M_contig89533.20755.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig89533.20755.1
Unique Nameprot_M-pyrifera_M_contig89533.20755.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length201
Homology
BLAST of mRNA_M-pyrifera_M_contig89533.20755.1 vs. uniprot
Match: A0A7S4UR01_9EUKA (Actin-related protein 2/3 complex subunit n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4UR01_9EUKA)

HSP 1 Score: 266 bits (680), Expect = 7.830e-86
Identity = 123/204 (60.29%), Postives = 153/204 (75.00%), Query Frame = 0
Query:    1 PTLVILRINRAATDVKWSPNEDKFAVASGAKCVSVCYFEKDNDWWVSKHIKKHKSTVLSIDWHPNNVLLATASSDFNARVFSGFVRGVDKKPGETPYGTRLPFG-ELLAEYPSAGWVKCVRWSPSGNQLAFVSHDSSVTVMDAASGTPS---VVKLRGLPMNGVVWVGETTIVAGGHDCFPHSYTKGADGWELGRNRDERKGPA 200
            PTLVILRINRAAT VKWSPNEDKFAV+SGAKCVS+CY+E++NDWWVSKHIKKH+STV S+DWHP NVL+ATA+ D+  R+FS F++G+D++P  TPYG RLPFG E+L EY + GWV+ VRW+PSGNQLAFV+ +SS+TV+D  +G P    VV    LP+  + W+ ET IV  GH C P  +      W   R+ DE K  A
Sbjct:   95 PTLVILRINRAATQVKWSPNEDKFAVSSGAKCVSICYYEEENDWWVSKHIKKHESTVTSVDWHPGNVLIATAACDWKVRIFSAFIKGLDQRPENTPYGKRLPFGHEVLCEYSAGGWVQSVRWAPSGNQLAFVAQNSSLTVVDVTNGAPGEVQVVNFNDLPLMDLYWISETKIVGAGHGCKPLCFINQGGTWVFERSLDEAKAAA 298          
BLAST of mRNA_M-pyrifera_M_contig89533.20755.1 vs. uniprot
Match: A0A7S4IJ01_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IJ01_9EUKA)

HSP 1 Score: 251 bits (640), Expect = 1.580e-81
Identity = 112/162 (69.14%), Postives = 136/162 (83.95%), Query Frame = 0
Query:   37 YFEKDNDWWVSKHIKKHKSTVLSIDWHPNNVLLATASSDFNARVFSGFVRGVDKKPGETPYGTRLPFGELLAEYPSAGWVKCVRWSPSGNQLAFVSHDSSVTVMDAASGTPSVVKLRGLPMNGVVWVGETTIVAGGHDCFPHSYTKGADGWELGRNRDERKG 198
            YFEKDNDWWVSKHIKK +STVL +DWHPNN+LLATAS+D  ARV SGFVRG+DKKPGET YG RLPF ELLAEYP+ GW+  + WSPSG++LAF SHDS++TVMD A+GTP+V+KLR LP+  ++W  ETTIV  GH+ FP ++ KGADGW +G+N DE+KG
Sbjct:    1 YFEKDNDWWVSKHIKKFESTVLKVDWHPNNILLATASADNIARVVSGFVRGIDKKPGETHYGARLPFAELLAEYPANGWMHSIGWSPSGDELAFTSHDSTLTVMDCATGTPTVLKLRELPLVDLLWTSETTIVGAGHNFFPRTFVKGADGWAIGKNLDEQKG 162          
BLAST of mRNA_M-pyrifera_M_contig89533.20755.1 vs. uniprot
Match: L8GH55_ACACA (Actin-related protein 2/3 complex subunit n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GH55_ACACA)

HSP 1 Score: 254 bits (650), Expect = 2.950e-81
Identity = 117/198 (59.09%), Postives = 148/198 (74.75%), Query Frame = 0
Query:    1 PTLVILRINRAATDVKWSPNEDKFAVASGAKCVSVCYFEKDNDWWVSKHIKKHKSTVLSIDWHPNNVLLATASSDFNARVFSGFVRGVDKKPGETPYGTRLPFGELLAEYPSAGWVKCVRWSPSGNQLAFVSHDSSVTVMDAASG---TPSVVKLRGLPMNGVVWVGETTIVAGGHDCFPHSYTKGADGWELGRNRDE 195
            PTLV+LRI RAAT VKWSPNE+KFAVA+GAKCVSVCYFE+ NDWWVSKHIK HKSTVL++ WHPNN+ LATA+SDF AR+FS F++GVDK+P  TP+G +LPFGE+LAEY   GWV  V WSPSG  L+FVSHDS+++ ++ ++G    P  + L GLP   + ++  T I+A G+DC P  +      W   +N DE
Sbjct:   95 PTLVLLRITRAATHVKWSPNEEKFAVATGAKCVSVCYFEEANDWWVSKHIKLHKSTVLNVAWHPNNIFLATAASDFKARIFSAFIKGVDKRPENTPFGDKLPFGEMLAEYSCGGWVHGVSWSPSGEWLSFVSHDSAISFVNISTGREAVPQRLSLSGLPYRVLAFLNPTDIIAAGYDCNPALFRLSGQTWAFVKNVDE 292          
BLAST of mRNA_M-pyrifera_M_contig89533.20755.1 vs. uniprot
Match: A0A674CHW6_SALTR (Actin-related protein 2/3 complex subunit n=3 Tax=Salmoninae TaxID=504568 RepID=A0A674CHW6_SALTR)

HSP 1 Score: 239 bits (609), Expect = 5.000e-75
Identity = 116/182 (63.74%), Postives = 144/182 (79.12%), Query Frame = 0
Query:    1 PTLVILRINRAATDVKWSPNEDKFAVASGAKCVSVCYFEKDNDWWVSKHIKKH-KSTVLSIDWHPNNVLLATASSDFNARVFSGFVRGVDKKPGETPYGTRLPFGELLAEYPSAG---WVKCVRWSPSGNQLAFVSHDSSVTVMDAASG-TPSVVKLRGLPMNGVVWVGETTIVAGGHDCFP 177
            PTLVILRINRAAT VKWSP E+KFAV SGA+ +SVCYFE DNDWWVSKHIKK  +STVLS+DWHPNNVLLA  SSDF  RVFS +++ V++KPG TP+G+++PFG +LAE+  AG   WV  V +S SGN+LA+VSHDS+VTV+D   G TPS +K   LP+  V+++ E ++VA GHDC P
Sbjct:   82 PTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESDNDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSSDFKCRVFSAYIKEVEEKPGPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSSSGNRLAWVSHDSTVTVVDGTKGSTPSQLKTEFLPLLSVLFISENSVVAAGHDCCP 263          
BLAST of mRNA_M-pyrifera_M_contig89533.20755.1 vs. uniprot
Match: A0A8C7HZR8_ONCKI (Actin-related protein 2/3 complex subunit n=4 Tax=Oncorhynchus TaxID=8016 RepID=A0A8C7HZR8_ONCKI)

HSP 1 Score: 239 bits (609), Expect = 6.300e-75
Identity = 115/182 (63.19%), Postives = 144/182 (79.12%), Query Frame = 0
Query:    1 PTLVILRINRAATDVKWSPNEDKFAVASGAKCVSVCYFEKDNDWWVSKHIKKH-KSTVLSIDWHPNNVLLATASSDFNARVFSGFVRGVDKKPGETPYGTRLPFGELLAEYPSAG---WVKCVRWSPSGNQLAFVSHDSSVTVMDAASG-TPSVVKLRGLPMNGVVWVGETTIVAGGHDCFP 177
            PTLVILRINRAAT VKWSP E+KFAV SGA+ +SVCYFE DNDWWVSKHIKK  +STVLS+DWHPNNVLLA  S DF  RVFS +++ V++KPG TP+G+++PFG +LAE+  AG   WV  V +S SGN+LA+VSHDS+VTV+D   G TPS +K   LP+  V+++ E ++VA GHDC+P
Sbjct:   88 PTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESDNDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKPGPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSSSGNRLAWVSHDSTVTVVDGTKGSTPSQLKTEFLPLLSVLFISENSVVAAGHDCYP 269          
BLAST of mRNA_M-pyrifera_M_contig89533.20755.1 vs. uniprot
Match: A0A1Y2GM42_9FUNG (Actin-related protein 2/3 complex subunit n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GM42_9FUNG)

HSP 1 Score: 239 bits (609), Expect = 6.680e-75
Identity = 110/190 (57.89%), Postives = 138/190 (72.63%), Query Frame = 0
Query:    1 PTLVILRINRAATDVKWSPNEDKFAVASGAKCVSVCYFEKDNDWWVSKHIKKH-KSTVLSIDWHPNNVLLATASSDFNARVFSGFVRGVDKKPGETPYGTRLPFGELLAEYPSA--GWVKCVRWSPSGNQLAFVSHDSSVTVMDAASGTPSVVKLRGLPMNGVVWVGETTIVAGGHDCFPHSYTKGADGW 187
            PTLV+LRINRAAT  +WSP EDKFAVASG++C+SVCYFE+DNDWWV KHIKK  +STVLS+DWHPNNVLLA   +D  ARVFS F++GVDKKP  +P+G +LPF  +  E+ S   GW+  V +SPSG+ LAF  HDSS+TV+  A+G+   ++   LP   V+W+ E  IVA GHDC PH +      W
Sbjct:   95 PTLVLLRINRAATFTRWSPEEDKFAVASGSRCISVCYFEEDNDWWVGKHIKKPIRSTVLSLDWHPNNVLLAAGCADMKARVFSAFIKGVDKKPAPSPWGEKLPFNTVCGEFSSGTGGWIHGVAFSPSGDSLAFTGHDSSITVVSPATGSVQTIRAPYLPYVSVLWLNENQIVAAGHDCAPHLFENKGQQW 284          
BLAST of mRNA_M-pyrifera_M_contig89533.20755.1 vs. uniprot
Match: A0A674CJ26_SALTR (Actin-related protein 2/3 complex subunit n=8 Tax=Salmoninae TaxID=504568 RepID=A0A674CJ26_SALTR)

HSP 1 Score: 236 bits (602), Expect = 6.380e-74
Identity = 115/181 (63.54%), Postives = 143/181 (79.01%), Query Frame = 0
Query:    1 PTLVILRINRAATDVKWSPNEDKFAVASGAKCVSVCYFEKDNDWWVSKHIKKH-KSTVLSIDWHPNNVLLATASSDFNARVFSGFVRGVDKKPGETPYGTRLPFGELLAEYPSAG---WVKCVRWSPSGNQLAFVSHDSSVTVMDAASGTPSVVKLRGLPMNGVVWVGETTIVAGGHDCFP 177
            PTLVILRINRAAT VKWSP E+KFAV SGA+ +SVCYFE DNDWWVSKHIKK  +STVLS+DWHPNNVLLA  SSDF  RVFS +++ V++KPG TP+G+++PFG +LAE+  AG   WV  V +S SGN+LA+VSHDS+VTV+D  S  PS +K   LP+  V+++ E ++VA GHDC P
Sbjct:   88 PTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESDNDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSSDFKCRVFSAYIKEVEEKPGPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSSSGNRLAWVSHDSTVTVVDGGS-VPSQLKTEFLPLLSVLFISENSVVAAGHDCCP 267          
BLAST of mRNA_M-pyrifera_M_contig89533.20755.1 vs. uniprot
Match: A0A3Q2EIT3_CYPVA (Actin-related protein 2/3 complex subunit n=5 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3Q2EIT3_CYPVA)

HSP 1 Score: 235 bits (600), Expect = 1.350e-73
Identity = 113/182 (62.09%), Postives = 146/182 (80.22%), Query Frame = 0
Query:    1 PTLVILRINRAATDVKWSPNEDKFAVASGAKCVSVCYFEKDNDWWVSKHIKKH-KSTVLSIDWHPNNVLLATASSDFNARVFSGFVRGVDKKPGETPYGTRLPFGELLAEYPSAG---WVKCVRWSPSGNQLAFVSHDSSVTVMDAA-SGTPSVVKLRGLPMNGVVWVGETTIVAGGHDCFP 177
            PTLVILRINRAAT VKWSP E+KFAV SGA+ +SVCYFE +NDWWVSKHIKK  +ST+LS+DWHPNNVLLA  S DF  RVFS +++ V++KPG TP+G+++PFG +LAE+  AG   WV  V +S SGN+LA+VSHDS+VTV+D++ + +PS +K   LP+ GV++V E ++VA GHDC P
Sbjct:   88 PTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKPGPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSASGNRLAWVSHDSTVTVVDSSKTASPSQLKTEFLPLLGVIFVSENSLVAAGHDCCP 269          
BLAST of mRNA_M-pyrifera_M_contig89533.20755.1 vs. uniprot
Match: A0A3B3SGT3_9TELE (Actin-related protein 2/3 complex subunit n=6 Tax=Osteoglossiformes TaxID=41712 RepID=A0A3B3SGT3_9TELE)

HSP 1 Score: 235 bits (599), Expect = 1.920e-73
Identity = 115/186 (61.83%), Postives = 144/186 (77.42%), Query Frame = 0
Query:    1 PTLVILRINRAATDVKWSPNEDKFAVASGAKCVSVCYFEKDNDWWVSKHIKKH-KSTVLSIDWHPNNVLLATASSDFNARVFSGFVRGVDKKPGETPYGTRLPFGELLAEYPSAG---WVKCVRWSPSGNQLAFVSHDSSVTVMDAASGT-PSVVKLRGLPMNGVVWVGETTIVAGGHDCFPHSYT 181
            PTLVILRINRAAT VKWSP E+KFAV SGA+ +SVCYFE +NDWWVSKHIKK  +STVLS+DWHPNNVLLA  S DF  RVFS +++ VD+KPG TP+G+++PFG+++AE+  AG   WV  V +S SGN+LA+VSHDS+V  +DA  G  PS +K   LP   VV+V E++IVA GHDC P  ++
Sbjct:   88 PTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKPGATPWGSKMPFGQVMAEFGGAGSGGWVHSVCFSASGNRLAWVSHDSTVNFVDATKGNAPSQIKTEFLPFLSVVFVSESSIVAAGHDCCPMMFS 273          
BLAST of mRNA_M-pyrifera_M_contig89533.20755.1 vs. uniprot
Match: A0A261Y724_9FUNG (Actin-related protein 2/3 complex subunit n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y724_9FUNG)

HSP 1 Score: 234 bits (598), Expect = 1.920e-73
Identity = 115/200 (57.50%), Postives = 144/200 (72.00%), Query Frame = 0
Query:    1 PTLVILRINRAATDVKWSPNEDKFAVASGAKCVSVCYFEKDNDWWVSKHIKKH-KSTVLSIDWHPNNVLLATASSDFNARVFSGFVRGVDKKPGETPYGTRLPFGELLAEYPSA--GWVKCVRWSPSGNQLAFVSHDSSVTVMDAASGTPSVVKLR--GLPMNGVVWVGETTIVAGGHDCFPHSYTKGADGWELGRNRDE 195
            PTLV+LRINRAAT V+WSPNEDKFAVASGA+ +S+CYFE+DNDWWVSKH+KK  +STVLS+DWHPNNVLLA  S+D  ARVFS F++GVD KP  T +G +LPF  +  E+ ++  GWV  V +SPSG+ LAF SHDSSV ++    G   V+ +   GLP   + W  E  IVA GHDC P  +++  D W L R+ DE
Sbjct:   89 PTLVLLRINRAATYVRWSPNEDKFAVASGARVISICYFEEDNDWWVSKHLKKPIRSTVLSLDWHPNNVLLAAGSADTKARVFSAFIKGVDAKPQPTVWGDKLPFNTVCGEFANSAGGWVHSVAFSPSGDALAFTSHDSSVNIVYPVEGQSVVLNVNTSGLPFMTLFWPTEEQIVAAGHDCVPFLFSRKGDQWALDRSLDE 288          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89533.20755.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4UR01_9EUKA7.830e-8660.29Actin-related protein 2/3 complex subunit n=1 Tax=... [more]
A0A7S4IJ01_9EUKA1.580e-8169.14Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
L8GH55_ACACA2.950e-8159.09Actin-related protein 2/3 complex subunit n=1 Tax=... [more]
A0A674CHW6_SALTR5.000e-7563.74Actin-related protein 2/3 complex subunit n=3 Tax=... [more]
A0A8C7HZR8_ONCKI6.300e-7563.19Actin-related protein 2/3 complex subunit n=4 Tax=... [more]
A0A1Y2GM42_9FUNG6.680e-7557.89Actin-related protein 2/3 complex subunit n=1 Tax=... [more]
A0A674CJ26_SALTR6.380e-7463.54Actin-related protein 2/3 complex subunit n=8 Tax=... [more]
A0A3Q2EIT3_CYPVA1.350e-7362.09Actin-related protein 2/3 complex subunit n=5 Tax=... [more]
A0A3B3SGT3_9TELE1.920e-7361.83Actin-related protein 2/3 complex subunit n=6 Tax=... [more]
A0A261Y724_9FUNG1.920e-7357.50Actin-related protein 2/3 complex subunit n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 43..82
e-value: 1.6E-4
score: 31.0
coord: 103..141
e-value: 0.0078
score: 25.4
coord: 2..37
e-value: 22.0
score: 8.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 50..82
score: 9.773
IPR024977Anaphase-promoting complex subunit 4, WD40 domainPFAMPF12894ANAPC4_WD40coord: 15..81
e-value: 2.2E-4
score: 21.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..201
e-value: 6.3E-85
score: 287.2
IPR017383Actin-related protein 2/3 complex subunit 1PANTHERPTHR10709ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1coord: 1..197
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 8..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89533contigM-pyrifera_M_contig89533:35..793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89533.20755.1mRNA_M-pyrifera_M_contig89533.20755.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig89533 35..793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig89533.20755.1 ID=prot_M-pyrifera_M_contig89533.20755.1|Name=mRNA_M-pyrifera_M_contig89533.20755.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=201bp
PTLVILRINRAATDVKWSPNEDKFAVASGAKCVSVCYFEKDNDWWVSKHI
KKHKSTVLSIDWHPNNVLLATASSDFNARVFSGFVRGVDKKPGETPYGTR
LPFGELLAEYPSAGWVKCVRWSPSGNQLAFVSHDSSVTVMDAASGTPSVV
KLRGLPMNGVVWVGETTIVAGGHDCFPHSYTKGADGWELGRNRDERKGPA
K
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR024977Apc4_WD40_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017383ARPC1
IPR036322WD40_repeat_dom_sf