mRNA_M-pyrifera_M_contig8953.20753.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8953.20753.1 vs. uniprot
Match: D8LBZ5_ECTSI (Spindle pole body component n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ5_ECTSI) HSP 1 Score: 437 bits (1125), Expect = 3.860e-144 Identity = 217/247 (87.85%), Postives = 228/247 (92.31%), Query Frame = 1 Query: 1 QGKLSLQRLWFYVQPSMRTMESLETLTVELKDVKGGELLRRLRTLAGTGG--DEASRQLHTFLLHQASVPYLEMLETWIYDGSLNDQYGEFMIEQVEDVHKRDVGQDFNTRYWSGRYLLRPAHVIASLAGRQEKILTTGKYLNVVRSCGRRVDCPLAGPIPSDPGPAGGGLYAKVIDGAYGFASRCLMDLVVREGKLLPRLESIKHYFLLDRGDFFEHFLDIAETELDKVVPEISVTRLESLLQLSV 735 QGKLSLQRLWFYVQPSMRTMESLE LTVEL+D KGGE+LRRLR L GTGG DEASRQL+TFLLHQASVPYLEMLE WIY G+LNDQYGEFMIEQ EDVHK+DVGQDFNTRYWSGRYLLRP HVIA+LAGRQ+KILTTGKYLNVVR CGRRVDCPLAGPIP+DPG AG GLY KVIDGAYGFASRCLM LVVREG+LLPRLESIKHYFLLDRGDFFEH LD AETELDKV+P+ISV RLESLL LSV Sbjct: 749 QGKLSLQRLWFYVQPSMRTMESLEALTVELRDSKGGEMLRRLRALGGTGGGGDEASRQLYTFLLHQASVPYLEMLEIWIYHGNLNDQYGEFMIEQAEDVHKQDVGQDFNTRYWSGRYLLRPEHVIANLAGRQDKILTTGKYLNVVRECGRRVDCPLAGPIPADPGAAGEGLYLKVIDGAYGFASRCLMHLVVREGQLLPRLESIKHYFLLDRGDFFEHLLDCAETELDKVIPQISVPRLESLLHLSV 995
BLAST of mRNA_M-pyrifera_M_contig8953.20753.1 vs. uniprot
Match: A0A6H5JIQ4_9PHAE (Spindle pole body component n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ4_9PHAE) HSP 1 Score: 229 bits (585), Expect = 1.680e-73 Identity = 113/130 (86.92%), Postives = 120/130 (92.31%), Query Frame = 1 Query: 49 MRTMESLETLTVELKDVKGGELLRRLRTLAGT--GGDEASRQLHTFLLHQASVPYLEMLETWIYDGSLNDQYGEFMIEQVEDVHKRDVGQDFNTRYWSGRYLLRPAHVIASLAGRQEKILTTGKYLNVVR 432 MRTMESLE LTVEL+D KGGE+LRRLR L GT GGDEASRQL+TFLLHQASVPYLEMLE WIY G+LNDQYGEFMIEQ EDVHK+DVGQDFNTRYWSGRYLLRP HVIA+LAGRQ+KILTTGKYLNVVR Sbjct: 1 MRTMESLEALTVELRDSKGGEMLRRLRALGGTAGGGDEASRQLYTFLLHQASVPYLEMLEIWIYHGNLNDQYGEFMIEQAEDVHKQDVGQDFNTRYWSGRYLLRPEHVIANLAGRQDKILTTGKYLNVVR 130
BLAST of mRNA_M-pyrifera_M_contig8953.20753.1 vs. uniprot
Match: A0A835ZJD2_9STRA (Spc98 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJD2_9STRA) HSP 1 Score: 242 bits (617), Expect = 1.180e-69 Identity = 120/236 (50.85%), Postives = 160/236 (67.80%), Query Frame = 1 Query: 4 GKLSLQRLWFYVQPSMRTMESLETLTVELKDVKGGELLRRLRTLAGTGGDEASRQLHTFLLHQASVPYLEMLETWIYDGSLNDQYGEFMIEQVEDVHKRDVGQ----------DFNTRYWSGRYLLRPAHVIASLAGRQEKILTTGKYLNVVRSCGRRVDCPLAGPIPSDPGPAGGGLYAKVIDGAYGFASRCLMDLVVREGKLLPRLESIKHYFLLDRGDFFEHFLDIAETELDK 681 G LSLQRLWFY+QP++RTM L+ + E + +KGG+L+ RLR ++ +GG+ SR L+ FLL +A VPYL+ML WIY G+L+D YGEFMI + E + K DV DFN +YW GRY ++ V + L KILTTGKYLNVVR CG++V CP AGPI + Y ++++ AY FASR L+D+VV E +L+ RL +IKH+FLLD+GD F HF+D+AE EL K Sbjct: 557 GALSLQRLWFYLQPTLRTMGDLDKVCQESQGLKGGQLVNRLRDMSRSGGNSGSRHLYLFLLQRACVPYLDMLSQWIYTGALSDPYGEFMIREEEGMLKGDVQXXXXXXXXXXVDFNAQYWEGRYTIQQPMVASFLQAHAHKILTTGKYLNVVRECGKQVLCPHAGPITMEQSDTNDTRYGEIVEAAYAFASRTLLDVVVGECQLMARLRTIKHFFLLDQGDLFVHFMDVAEEELRK 792
BLAST of mRNA_M-pyrifera_M_contig8953.20753.1 vs. uniprot
Match: UPI0005219DFB (gamma-tubulin complex component 2 n=1 Tax=Apaloderma vittatum TaxID=57397 RepID=UPI0005219DFB) HSP 1 Score: 226 bits (575), Expect = 2.450e-68 Identity = 122/260 (46.92%), Postives = 172/260 (66.15%), Query Frame = 1 Query: 1 QGKLSLQRLWFYVQPSMRTMESLETL--TVELKDVKGGELLRRL--RTLAGTGGDEASRQLHTFLLHQASVPYLEMLETWIYDGSLNDQYGEFMIEQVEDVHKRDVGQDFNTRYWSGRYLLRPAHVIASLAGRQEKILTTGKYLNVVRSCGRRVDCPLAGPIPSDPGPAGGGLYAKVIDGAYGFASRCLMDLVVREGKLLPRLESIKHYFLLDRGDFFEHFLDIAETELDKVVPEISVTRLESLLQLSVQMSSASHDPFK 768 QG LSLQ+LWFY+QP+MRT+E L +L +V+ + GG L L +T TG D +++L +L ASVPY E+LE WIY G +ND Y EFM+E+ E + K + +D+N +YW RY + + + L +KIL+TGKYLNVVR CGR V CP+A + Y + I+ AY +AS+ L+D ++ E +L+ L SIKHYFL+D+GDFF HF+D+ E EL K V +I TRLE+LL+L+++MS+A+ DPFK Sbjct: 164 QGLLSLQKLWFYIQPTMRTLEILASLATSVDKGECMGGSTLSLLHDKTFNYTG-DSQAQELCLYLTKAASVPYFEILEKWIYRGIINDPYSEFMVEEHE-LQKEKIQEDYNDKYWDQRYTVVQQQIPSFLQKMADKILSTGKYLNVVRECGRDVTCPVAKEVIYTLKERA---YVEQIEKAYNYASKVLLDFLMEEKELVAHLRSIKHYFLMDQGDFFVHFMDLTEEELKKPVDDIVTTRLEALLELALRMSTANTDPFK 418
BLAST of mRNA_M-pyrifera_M_contig8953.20753.1 vs. uniprot
Match: A0A024URN3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024URN3_9STRA) HSP 1 Score: 238 bits (607), Expect = 2.560e-68 Identity = 128/256 (50.00%), Postives = 169/256 (66.02%), Query Frame = 1 Query: 1 QGKLSLQRLWFYVQPSMRTMESLETLTVELKDVKGGELLRRLRTLAGTGGDEASRQLHTFLLHQASVPYLEMLETWIYDGSLNDQYGEFMIEQVEDVHKRDVGQDFNTRYWSGRYLLRPAHVIASLAGRQEKILTTGKYLNVVRSCGRRVDCPLAGPIPSDPGPAGGGLYAKVIDGAYGFASRCLMDLVVREGKLLPRLESIKHYFLLDRGDFFEHFLDIAETELDKVVPEISVTRLESLLQLSVQMSSASHDPFK 768 QG L+L ++WFY+QPSMR ME L TL GG LL + L +G +A+ LH FLL +ASVPYL+MLE WIY G L+D Y EFM+ + + K ++G+D ++YW RY LR AHV L KILTTGKYLNV+R+CGR V+CP A I Y ++I+ A+GFASR L+D++ E L+ RL SIKHYFL+D+GDFF F+D+AETEL+ ++ +RLESLL LS+Q S+ S DP+K Sbjct: 615 QGGLTLSKVWFYIQPSMRAMEFLSTLVRSCLGHHGGALLTVIAQLPTSGDAKATSVLH-FLLEKASVPYLKMLELWIYCGDLHDPYDEFMVASDDTLVKEELGEDPWSKYWEQRYTLRDAHVPLFLTRFSYKILTTGKYLNVLRTCGRHVNCPFAAAITHAESVR---KYDELIENAHGFASRILVDMLRNEQDLMKRLRSIKHYFLMDQGDFFVDFMDLAETELNLRADKLLASRLESLLHLSLQSSTCSSDPYK 866
BLAST of mRNA_M-pyrifera_M_contig8953.20753.1 vs. uniprot
Match: A0A1V9ZKY5_9STRA (Gamma-tubulin complex component n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKY5_9STRA) HSP 1 Score: 238 bits (606), Expect = 3.280e-68 Identity = 127/255 (49.80%), Postives = 167/255 (65.49%), Query Frame = 1 Query: 4 GKLSLQRLWFYVQPSMRTMESLETLTVELKDVKGGELLRRLRTLAGTGGDEASRQLHTFLLHQASVPYLEMLETWIYDGSLNDQYGEFMIEQVEDVHKRDVGQDFNTRYWSGRYLLRPAHVIASLAGRQEKILTTGKYLNVVRSCGRRVDCPLAGPIPSDPGPAGGGLYAKVIDGAYGFASRCLMDLVVREGKLLPRLESIKHYFLLDRGDFFEHFLDIAETELDKVVPEISVTRLESLLQLSVQMSSASHDPFK 768 G LSL +LWFYVQPS+R ME L TL + +GG LL + L +G +A+ LH FLL +ASVPYL+MLE WIY G L D Y EFM+ + + K +V D ++YW RY LR HV + LA EK+LTTGKYLNV R+CGRRV+CP A IP + +++D A+ +AS L+DL+V E L+ RL SIKHYFL+D+GDFF F+D AE EL+ ++ +RLESLL LS+Q S+ + DP+K Sbjct: 593 GGLSLSKLWFYVQPSLRAMELLSTLVRSVLAKQGGALLSGIAQLPTSGDAKAAAVLH-FLLEKASVPYLQMLELWIYHGELKDPYDEFMVAADDTLQKEEVSDDPWSKYWERRYTLRETHVPSFLARVAEKVLTTGKYLNVFRTCGRRVNCPFADTIPHAESAR---RFDELVDKAHAYASALLVDLLVDEHDLMNRLRSIKHYFLMDQGDFFVDFMDAAEPELNLRADQLLASRLESLLHLSLQTSTCASDPYK 843
BLAST of mRNA_M-pyrifera_M_contig8953.20753.1 vs. uniprot
Match: A0A7L2S6Y3_9PASS (Gamma-tubulin complex component (Fragment) n=7 Tax=Neognathae TaxID=8825 RepID=A0A7L2S6Y3_9PASS) HSP 1 Score: 226 bits (575), Expect = 3.220e-67 Identity = 122/260 (46.92%), Postives = 172/260 (66.15%), Query Frame = 1 Query: 1 QGKLSLQRLWFYVQPSMRTMESLETL--TVELKDVKGGELLRRL--RTLAGTGGDEASRQLHTFLLHQASVPYLEMLETWIYDGSLNDQYGEFMIEQVEDVHKRDVGQDFNTRYWSGRYLLRPAHVIASLAGRQEKILTTGKYLNVVRSCGRRVDCPLAGPIPSDPGPAGGGLYAKVIDGAYGFASRCLMDLVVREGKLLPRLESIKHYFLLDRGDFFEHFLDIAETELDKVVPEISVTRLESLLQLSVQMSSASHDPFK 768 QG LSLQ+LWFY+QP+MRT+E L +L +V+ + GG L L +T TG D +++L +L ASVPY E+LE WIY G +ND Y EFM+E+ E + K + +D+N +YW RY + + + L +KIL+TGKYLNVVR CGR V CP+A + Y + I+ AY +AS+ L+D ++ E +L+ L SIKHYFL+D+GDFF HF+D+ E EL K V +I TRLE+LL+L+++MS+A+ DPFK Sbjct: 166 QGLLSLQKLWFYIQPTMRTLEILASLATSVDKGECMGGSTLSLLHDKTFNYTG-DSQAQELCLYLTKAASVPYFEILEKWIYRGIINDPYSEFMVEEHE-LQKEKIQEDYNDKYWDQRYTVVQQQIPSFLQKMADKILSTGKYLNVVRECGRDVTCPVAKEVIYTLKERA---YVEQIEKAYNYASKVLLDFLMEEKELVAHLRSIKHYFLMDQGDFFVHFMDLTEEELKKPVDDIVTTRLEALLELALRMSTANTDPFK 420
BLAST of mRNA_M-pyrifera_M_contig8953.20753.1 vs. uniprot
Match: A0A0W8D965_PHYNI (Spindle pole body component n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D965_PHYNI) HSP 1 Score: 232 bits (592), Expect = 4.950e-67 Identity = 124/254 (48.82%), Postives = 169/254 (66.54%), Query Frame = 1 Query: 13 SLQRLWFYVQPSMRTMESLETLTVEL-KDVKGGELLRRL-RTLAGTGGDEASRQLHTFLLHQASVPYLEMLETWIYDGSLNDQYGEFMIEQVEDVHKRDVGQDFNTRYWSGRYLLRPAHVIASLAGRQEKILTTGKYLNVVRSCGRRVDCPLAGPIPSDPGPAGGGLYAKVIDGAYGFASRCLMDLVVREGKLLPRLESIKHYFLLDRGDFFEHFLDIAETELDKVVPEISVTRLESLLQLSVQMSSASHDPFK 768 ++Q+LW+ VQPS+RT+E L L K + GG LL + R+++ GD +R++ +FL+ +ASVPYL+M+E WIY G L D Y EFMI + + V K DV + + YW RY +R + V L+ +KILT GKYLNV R+C R+VDCP AG I + +Y ++ID A+GFASR L+DL VRE L RL S+KHYFL+D+GDFF F+DIAE EL ++S+ RLESLL LS+Q S+ S DP+K Sbjct: 623 TIQKLWYNVQPSLRTLEMLSLLVDGCRKTIGGGSLLSEIQRSMSSLAGDSNARKVFSFLMERASVPYLKMVERWIYHGDLVDPYDEFMIRRDDQVSKEDVQDNPYSTYWQSRYTIRSSQVPLFLSRVAQKILTAGKYLNVFRTCSRQVDCPFAGEIVFSSSES---VYEELIDKAHGFASRVLLDLFVRENDLQNRLISLKHYFLMDQGDFFVDFMDIAEVELKLRADKLSLPRLESLLHLSLQTSTCSSDPYK 873
BLAST of mRNA_M-pyrifera_M_contig8953.20753.1 vs. uniprot
Match: V9KBM4_CALMI (Gamma-tubulin complex component (Fragment) n=1 Tax=Callorhinchus milii TaxID=7868 RepID=V9KBM4_CALMI) HSP 1 Score: 228 bits (582), Expect = 6.300e-67 Identity = 125/260 (48.08%), Postives = 172/260 (66.15%), Query Frame = 1 Query: 1 QGKLSLQRLWFYVQPSMRTMESLETL--TVELKDVKGGELLRRL--RTLAGTGGDEASRQLHTFLLHQASVPYLEMLETWIYDGSLNDQYGEFMIEQVEDVHKRDVGQDFNTRYWSGRYLLRPAHVIASLAGRQEKILTTGKYLNVVRSCGRRVDCPLAGPIPSDPGPAGGGLYAKVIDGAYGFASRCLMDLVVREGKLLPRLESIKHYFLLDRGDFFEHFLDIAETELDKVVPEISVTRLESLLQLSVQMSSASHDPFK 768 QG LSLQ+LWFY+QP++RTME L ++ +VE D GG L L RT TG D +++L +L ASVPY E+LE WIY G + D Y EFM+E+ E + K + +D+N +YW RY + + + L +KIL+TGKYLNVVR CGR V CP A + Y + I+ AY +AS+ L+D +++E +LL RL SIKHYFL+D+GDFF HF+D+ E EL K V +I TRLE+LL+L+++MS+A+ DPFK Sbjct: 186 QGLLSLQKLWFYIQPTIRTMEILASIATSVEKGDCMGGSTLSLLHDRTFNYTG-DSQAQELCLYLTKAASVPYFEILEKWIYRGIIQDPYSEFMVEEHE-LQKEKIQEDYNDKYWDRRYTIIQHRIPSFLQKMADKILSTGKYLNVVRECGRDVTCPDAKEVIYTLKERA---YVEQIEKAYNYASKVLLDFLMKEKELLERLRSIKHYFLMDQGDFFVHFMDLTENELKKPVDDIIATRLEALLELALRMSTANTDPFK 440
BLAST of mRNA_M-pyrifera_M_contig8953.20753.1 vs. uniprot
Match: W4HBM7_9STRA (Spindle pole body component n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HBM7_9STRA) HSP 1 Score: 232 bits (592), Expect = 6.320e-67 Identity = 124/256 (48.44%), Postives = 166/256 (64.84%), Query Frame = 1 Query: 1 QGKLSLQRLWFYVQPSMRTMESLETLTVELKDVKGGELLRRLRTLAGTGGDEASRQLHTFLLHQASVPYLEMLETWIYDGSLNDQYGEFMIEQVEDVHKRDVGQDFNTRYWSGRYLLRPAHVIASLAGRQEKILTTGKYLNVVRSCGRRVDCPLAGPIPSDPGPAGGGLYAKVIDGAYGFASRCLMDLVVREGKLLPRLESIKHYFLLDRGDFFEHFLDIAETELDKVVPEISVTRLESLLQLSVQMSSASHDPFK 768 QG L+L ++WFY+QPS+R ME L TL GG LL + L T GD + + FLL +ASVPYL+MLE WIY G L+D Y EFM+ + + K ++G+D ++YW RY LR +HV L KILT+GKYLNV+R+CGR V+CP A I Y ++ID A+GFAS L+D++ E L+ RL SIKHYFL+D+GDFF F+D+AETEL+ ++ +RLESLL LS+Q S+ S DP+K Sbjct: 614 QGALNLSKIWFYIQPSLRAMEFLSTLVRSCLGHHGGALLSVIAQLP-TSGDAKATSVLNFLLEKASVPYLKMLEKWIYYGDLHDPYDEFMVASDDTLVKEELGEDPWSKYWEQRYTLRESHVPLFLNRFSTKILTSGKYLNVLRTCGRHVNCPFAAVITHAESVR---KYDELIDNAHGFASHALVDMLRTEQDLMKRLRSIKHYFLMDQGDFFVDFMDLAETELNLRADKLLASRLESLLHLSLQSSTCSSDPYK 865 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8953.20753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8953.20753.1 >prot_M-pyrifera_M_contig8953.20753.1 ID=prot_M-pyrifera_M_contig8953.20753.1|Name=mRNA_M-pyrifera_M_contig8953.20753.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp QGKLSLQRLWFYVQPSMRTMESLETLTVELKDVKGGELLRRLRTLAGTGGback to top mRNA from alignment at M-pyrifera_M_contig8953:412..7502+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8953.20753.1 ID=mRNA_M-pyrifera_M_contig8953.20753.1|Name=mRNA_M-pyrifera_M_contig8953.20753.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7091bp|location=Sequence derived from alignment at M-pyrifera_M_contig8953:412..7502+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8953:412..7502+ >mRNA_M-pyrifera_M_contig8953.20753.1 ID=mRNA_M-pyrifera_M_contig8953.20753.1|Name=mRNA_M-pyrifera_M_contig8953.20753.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1536bp|location=Sequence derived from alignment at M-pyrifera_M_contig8953:412..7502+ (Macrocystis pyrifera P11B4 male)back to top |