prot_M-pyrifera_M_contig8950.20750.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8950.20750.1
Unique Nameprot_M-pyrifera_M_contig8950.20750.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length468
Homology
BLAST of mRNA_M-pyrifera_M_contig8950.20750.1 vs. uniprot
Match: D8LB77_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB77_ECTSI)

HSP 1 Score: 484 bits (1247), Expect = 1.480e-150
Identity = 254/463 (54.86%), Postives = 308/463 (66.52%), Query Frame = 0
Query:    7 SDWSEPYIIQTKCHTDRTATNKRESEEAVFKGGARGAGGARRPEFKFGTVWEHTPGNRHIHIYAKVWVVNKTGVSLAYRAPDPKKEQDQSDAVAIRRPTNACYRTDGDTMLFSKYVTGGEACVKRCAGS------------GGEAGLPLMLSCRTGSLQTMPYGMATDAVDSPLYLSETRTSKTQDPLPCYAIDGAE-----------RDADTTWWPMYHDCPTVKVRLPREVTPAGAQRVHLLTAGTDAWVEKSAMDTLNVGSAARLVAFMPSRDCRVYVGMDNRLLTPKPGPPKWLGLQGFERCKHGGVALDAHATPANLAPNNFALYSRFCRGLSVVSLGLNVDKDGDTVEGKDGRAAAMYFVFVVRVPEEEALLEVDVGPVVMHRNLA----FRQHHRWRLKPHFQPGDPCYSDRDES-HTVTALPEELQGRHLMQIVTMQKGRIGCDSEIDMGSSSEG 441
            SD+ + YII+ K HT+RT  N+ +S+EAVF  GARG+GGARRPEFKFG VWEHTPGNRHIH+Y+KVWV+NKTGVSLAYRA  P KE D+ + V +RRP NA YRTDGDTMLFS+Y+TG + C     G             GGEAG PLML+CR  +LQTMPY MA  AV + L LSETR+SK++ PLPC  +  A+             A+++ WP+Y D P  +VRLP EV     +RVHLLT  +D             GS    V F PSRDCRVY+G+D RLL   PGPPKWL LQGFER +   V++     PA+LAP  F LYSRFCRGLSVV LG N+D DGD V  + G  AAMYFV VVRVPE EA+ EVD+GPV MHR++      R+HHRWR+KP+F+PGDPCY+DR  S +TVT LPE+L+G  LM       G  G D + +  SSS G
Sbjct: 1586 SDFCKSYIIEAKRHTNRTLLNRMKSKEAVFSHGARGSGGARRPEFKFGAVWEHTPGNRHIHLYSKVWVLNKTGVSLAYRASIPTKEDDRKEKVFVRRPYNASYRTDGDTMLFSRYMTGAKRCKSFGGGDKTGGGGATASEIGGEAGFPLMLTCRANTLQTMPYAMADSAVGAALLLSETRSSKSEQPLPCLTVPAADDAXXXXXXXXXXXAESSSWPLYCDYPPARVRLPEEVVSERRRRVHLLTLRSD------------TGS----VTFTPSRDCRVYIGLDKRLLAADPGPPKWLALQGFERREGLDVSV-TDVQPADLAPQGFGLYSRFCRGLSVVPLGQNLDHDGDGVSERRGGPAAMYFVVVVRVPESEAVGEVDIGPVAMHRSVGKIFDMREHHRWRMKPNFKPGDPCYTDRPSSENTVTGLPEKLRGLKLMAATAASSGEGGYDGDTERASSSPG 2031          
BLAST of mRNA_M-pyrifera_M_contig8950.20750.1 vs. uniprot
Match: A0A6H5KB17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB17_9PHAE)

HSP 1 Score: 445 bits (1145), Expect = 1.070e-137
Identity = 240/438 (54.79%), Postives = 292/438 (66.67%), Query Frame = 0
Query:    7 SDWSEPYIIQTKCHTDRTATNKRESEEAVFKGGARGAGGARRPEFKFGTVWEHTPGNRHIHIYAKVWVVNKTGVSLAYRAPDPKKEQDQSDAVAIRRPTNACYRTDGDTMLFSKYVTGGEACVKRCAGS------------GGEAGLPLMLSCRTGSLQTMPYGMATDAVDSPLYLSETRTSKTQDPLPCYAI---DGAERDA-----DTTWWPMYHDCPTVKVRLPREVTPAGAQRVHLLTAGTDAWVEKSAMDTLNVGSAARLVAFMPSRDCRVYVGMDNRLLTPKPGPPKWLGLQGFERCKHGGVALDAHATPANLAPNNFALYSRFCRGLSVVSLGLNVDKDGDTVEGKDGRAAAMYFVFVVRVPEEEALLEVDVGPVVMHRNLAFRQHHRWRLKPHFQPGDPCYSDRDES-HTVTALPEELQGRHLMQIVTMQ 423
            SD+ + YII+ K HT+RT  N+ +S+EAVF  GARG+GGARRPEFKFG +WEHTPGNRHIH+Y+KVWV+NKTGVSLAYRA  P K+ D+ + V +RRP NA YRTDGDTMLFS+Y+TG + C     G             GGEAG PLML+C   +LQTMPY MA  AV + L LSETR+SK++ PLPC  +   D A+ DA     +++ WP+Y D P  +VRLP EV   G +RVHLLT  +D             GS    V F PSRDCRVY+G+D RLL   PGPPKWL LQGFER +   V++     PA+LAP  F LYSRFCRGLSVV LG N+D DGD V  + G  AAMYFV V+RVPE EA+ EVD+GPV MHR++A        ++     GDPCY+DR  S +TVT LPE+L G  LM I T Q
Sbjct:  173 SDFCKSYIIEAKRHTNRTLLNRIKSKEAVFSHGARGSGGARRPEFKFGVIWEHTPGNRHIHLYSKVWVLNKTGVSLAYRASIPTKDDDRKEKVFVRRPYNASYRTDGDTMLFSRYMTGTKRCKSFGGGDKTGGGGATAREIGGEAGFPLMLTCHANTLQTMPYAMADSAVGADLLLSETRSSKSEQPLPCLTVPAADDADADAXXXGAESSSWPLYCDYPPARVRLPEEVLSEGRRRVHLLTLRSD------------TGS----VTFTPSRDCRVYIGLDKRLLAADPGPPKWLALQGFERREGLDVSV-TDVQPADLAPQGFGLYSRFCRGLSVVPLGKNLDHDGDGVSERRGGPAAMYFVVVLRVPESEAVGEVDIGPVAMHRSVAKIVSSEASVRGFL--GDPCYTDRPSSENTVTGLPEKLWGLKLMHIATSQ 591          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8950.20750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB77_ECTSI1.480e-15054.86SHR-BD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KB17_9PHAE1.070e-13754.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8950contigM-pyrifera_M_contig8950:151..11498 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8950.20750.1mRNA_M-pyrifera_M_contig8950.20750.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8950 151..11498 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8950.20750.1 ID=prot_M-pyrifera_M_contig8950.20750.1|Name=mRNA_M-pyrifera_M_contig8950.20750.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=468bp
MANGDDSDWSEPYIIQTKCHTDRTATNKRESEEAVFKGGARGAGGARRPE
FKFGTVWEHTPGNRHIHIYAKVWVVNKTGVSLAYRAPDPKKEQDQSDAVA
IRRPTNACYRTDGDTMLFSKYVTGGEACVKRCAGSGGEAGLPLMLSCRTG
SLQTMPYGMATDAVDSPLYLSETRTSKTQDPLPCYAIDGAERDADTTWWP
MYHDCPTVKVRLPREVTPAGAQRVHLLTAGTDAWVEKSAMDTLNVGSAAR
LVAFMPSRDCRVYVGMDNRLLTPKPGPPKWLGLQGFERCKHGGVALDAHA
TPANLAPNNFALYSRFCRGLSVVSLGLNVDKDGDTVEGKDGRAAAMYFVF
VVRVPEEEALLEVDVGPVVMHRNLAFRQHHRWRLKPHFQPGDPCYSDRDE
SHTVTALPEELQGRHLMQIVTMQKGRIGCDSEIDMGSSSEGGERRRGGEK
NASGGGGGGGGGGRGGGG
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