prot_M-pyrifera_M_contig89458.20733.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig89458.20733.1
Unique Nameprot_M-pyrifera_M_contig89458.20733.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length114
Homology
BLAST of mRNA_M-pyrifera_M_contig89458.20733.1 vs. uniprot
Match: A0A151Z3Z4_9MYCE (Rab GTPase n=2 Tax=Dictyosteliales TaxID=2058949 RepID=A0A151Z3Z4_9MYCE)

HSP 1 Score: 171 bits (432), Expect = 1.160e-51
Identity = 87/110 (79.09%), Postives = 96/110 (87.27%), Query Frame = 0
Query:    1 MGILLVYDVTDDKSFGNIRNWIRNIEQHATESVNKMLIGNKCDMVDKKVVDTADGQKLADEYGIKFMETSAKNSINVDKAFITLAKDIKARLID-PNGPSGGADPGVVDP 109
            MGILLVYDVTD+KSFGNIRNWIRNIEQHAT+SVNKMLIGNKCDM +KKVVD+A G+ LADEYGIKF+ETSAKNSINVD+AFITLAKDIK R+ID PN P    D   + P
Sbjct:   93 MGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSARGKSLADEYGIKFLETSAKNSINVDEAFITLAKDIKKRMIDTPNEPPPTRDTTSITP 202          
BLAST of mRNA_M-pyrifera_M_contig89458.20733.1 vs. uniprot
Match: F4PVW1_CAVFA (Rab GTPase n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PVW1_CAVFA)

HSP 1 Score: 167 bits (424), Expect = 1.790e-50
Identity = 86/115 (74.78%), Postives = 99/115 (86.09%), Query Frame = 0
Query:    1 MGILLVYDVTDDKSFGNIRNWIRNIEQHATESVNKMLIGNKCDMVDKKVVDTADGQKLADEYGIKFMETSAKNSINVDKAFITLAKDIKARLID-PNGPSGGADPGVVDPTAPPK 114
            MGILLVYDVTD+KSFGNIRNWIRNIEQHATESVNKMLIGNKCD+ +KKVVD++ G+ LADEYGIKF+ETSAKNSINV++AFI+LAKDIK R+ID PN P+       +  TAP K
Sbjct:   92 MGILLVYDVTDEKSFGNIRNWIRNIEQHATESVNKMLIGNKCDLPEKKVVDSSRGKALADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTPNEPNNQTGNAQLSDTAPAK 206          
BLAST of mRNA_M-pyrifera_M_contig89458.20733.1 vs. uniprot
Match: RAB8A_DICDI (Ras-related protein Rab-8A n=2 Tax=Dictyostelium TaxID=5782 RepID=RAB8A_DICDI)

HSP 1 Score: 165 bits (417), Expect = 1.830e-49
Identity = 83/107 (77.57%), Postives = 94/107 (87.85%), Query Frame = 0
Query:    1 MGILLVYDVTDDKSFGNIRNWIRNIEQHATESVNKMLIGNKCDMVDKKVVDTADGQKLADEYGIKFMETSAKNSINVDKAFITLAKDIKARLID-PNGPSGGADPGV 106
            MGILLVYDVTD+KSFGNIRNWIRNIEQHAT+SVNKMLIGNKCDM +KKVVD++ G+ LADEYGIKF+ETSAKNSINV++AFI+LAKDIK R+ID PN       PG 
Sbjct:   89 MGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTPNEQPQVVQPGT 195          
BLAST of mRNA_M-pyrifera_M_contig89458.20733.1 vs. uniprot
Match: UPI000644CB81 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644CB81)

HSP 1 Score: 162 bits (411), Expect = 1.940e-48
Identity = 79/94 (84.04%), Postives = 90/94 (95.74%), Query Frame = 0
Query:    1 MGILLVYDVTDDKSFGNIRNWIRNIEQHATESVNKMLIGNKCDMVDKKVVDTADGQKLADEYGIKFMETSAKNSINVDKAFITLAKDIKARLID 94
            MGILLVYDVTD+KSFGNIRNWIRNIEQHATESVNKMLIGNKCD+ +KKVVD++ G+ LADE+GIKF+ETSAKNSINV++AFITLAKDIK R+ID
Sbjct:   93 MGILLVYDVTDEKSFGNIRNWIRNIEQHATESVNKMLIGNKCDLPEKKVVDSSRGKALADEHGIKFLETSAKNSINVEEAFITLAKDIKKRMID 186          
BLAST of mRNA_M-pyrifera_M_contig89458.20733.1 vs. uniprot
Match: RAB8B_DICDI (Ras-related protein Rab-8B n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=RAB8B_DICDI)

HSP 1 Score: 161 bits (407), Expect = 5.170e-48
Identity = 79/99 (79.80%), Postives = 92/99 (92.93%), Query Frame = 0
Query:    1 MGILLVYDVTDDKSFGNIRNWIRNIEQHATESVNKMLIGNKCDMVDKKVVDTADGQKLADEYGIKFMETSAKNSINVDKAFITLAKDIKARLID-PNGP 98
            MGILLVYDVTD+KSFG+IRNWIRNIEQHA++SVNKMLIGNKCDM +KKVVD++ G+ LADEYGIKF+ETSAKNS+NV++AFI LAKDIK R+ID PN P
Sbjct:   89 MGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKRMIDTPNDP 187          
BLAST of mRNA_M-pyrifera_M_contig89458.20733.1 vs. uniprot
Match: D3BL86_POLPP (Rab GTPase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BL86_POLPP)

HSP 1 Score: 161 bits (407), Expect = 7.160e-48
Identity = 78/94 (82.98%), Postives = 90/94 (95.74%), Query Frame = 0
Query:    1 MGILLVYDVTDDKSFGNIRNWIRNIEQHATESVNKMLIGNKCDMVDKKVVDTADGQKLADEYGIKFMETSAKNSINVDKAFITLAKDIKARLID 94
            MGILLVYDVTD+KSFGNIRNWIRNIEQHATESVNKMLIGNKCD+ +KKVVD++ G+ LADE+GIKF+ETSAKNSINV++AFI+LAKDIK R+ID
Sbjct:   92 MGILLVYDVTDEKSFGNIRNWIRNIEQHATESVNKMLIGNKCDLPEKKVVDSSRGKALADEHGIKFLETSAKNSINVEEAFISLAKDIKKRIID 185          
BLAST of mRNA_M-pyrifera_M_contig89458.20733.1 vs. uniprot
Match: UPI000644E6FC (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E6FC)

HSP 1 Score: 161 bits (407), Expect = 7.160e-48
Identity = 79/94 (84.04%), Postives = 88/94 (93.62%), Query Frame = 0
Query:    1 MGILLVYDVTDDKSFGNIRNWIRNIEQHATESVNKMLIGNKCDMVDKKVVDTADGQKLADEYGIKFMETSAKNSINVDKAFITLAKDIKARLID 94
            MGILLVYDVTD+KSFGNIRNWIRNIEQHATESV KMLIGNKCD+ +KKVVDTA G+ LADE+GIKF+ETSAKNSINV++AFITLAKDIK  +ID
Sbjct:   93 MGILLVYDVTDEKSFGNIRNWIRNIEQHATESVKKMLIGNKCDLPEKKVVDTARGKALADEHGIKFLETSAKNSINVEEAFITLAKDIKKNMID 186          
BLAST of mRNA_M-pyrifera_M_contig89458.20733.1 vs. uniprot
Match: A0A6U3B2I0_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A6U3B2I0_9EUKA)

HSP 1 Score: 153 bits (387), Expect = 1.080e-44
Identity = 79/106 (74.53%), Postives = 92/106 (86.79%), Query Frame = 0
Query:    1 MGILLVYDVTDDKSFGNIRNWIRNIEQHATESVNKMLIGNKCDMVDKKVVDTADGQKLADEYGIKFMETSAKNSINVDKAFITLAKDIKARLIDPNGPSGGADPGV 106
            MGILLVYDVT+++SF NIRNWIRNIE+HAT++V+K+LIGNKCDMVDKKV+D   GQ LA EYGIKF+ETSAKN+INV++AFITLAK IK RLID  GP G   PGV
Sbjct:   91 MGILLVYDVTEERSFSNIRNWIRNIEKHATDNVDKILIGNKCDMVDKKVIDAERGQALAKEYGIKFVETSAKNNINVEEAFITLAKAIKERLID--GPKG---PGV 191          
BLAST of mRNA_M-pyrifera_M_contig89458.20733.1 vs. uniprot
Match: A0A1Y2HP65_9FUNG (Ras family-domain-containing protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HP65_9FUNG)

HSP 1 Score: 152 bits (383), Expect = 2.760e-44
Identity = 71/103 (68.93%), Postives = 88/103 (85.44%), Query Frame = 0
Query:    1 MGILLVYDVTDDKSFGNIRNWIRNIEQHATESVNKMLIGNKCDMVDKKVVDTADGQKLADEYGIKFMETSAKNSINVDKAFITLAKDIKARLIDPNGPSGGAD 103
            MGILL+YDVTD++SF NIRNWIRNIEQHA+  VNK+L+GNKCD+ DKKV+    GQ+LADE+GIKF+ETSAK++I V++AF +LAKDIK RLID  G +GG D
Sbjct:   85 MGILLIYDVTDERSFNNIRNWIRNIEQHASAGVNKILVGNKCDVADKKVISKEQGQELADEFGIKFIETSAKSNIGVEEAFFSLAKDIKKRLIDSQGAAGGDD 187          
BLAST of mRNA_M-pyrifera_M_contig89458.20733.1 vs. uniprot
Match: A0A2P6N1S6_9EUKA (Rab GTPase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N1S6_9EUKA)

HSP 1 Score: 151 bits (382), Expect = 3.690e-44
Identity = 72/98 (73.47%), Postives = 89/98 (90.82%), Query Frame = 0
Query:    1 MGILLVYDVTDDKSFGNIRNWIRNIEQHATESVNKMLIGNKCDMVDKKVVDTADGQKLADEYGIKFMETSAKNSINVDKAFITLAKDIKARLIDPNGP 98
            MGILLVYDVTDDKSF N+ NWIRNIEQHA+E+VNK+LIGNKCD+VDKKV+DTA G+ +ADEY I+F+ETSAKNSINV++AFI+LA++IK R++D   P
Sbjct:   89 MGILLVYDVTDDKSFANMGNWIRNIEQHASENVNKILIGNKCDLVDKKVIDTARGKAMADEYKIRFLETSAKNSINVEEAFISLAREIKHRVMDTEKP 186          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89458.20733.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A151Z3Z4_9MYCE1.160e-5179.09Rab GTPase n=2 Tax=Dictyosteliales TaxID=2058949 R... [more]
F4PVW1_CAVFA1.790e-5074.78Rab GTPase n=1 Tax=Cavenderia fasciculata (strain ... [more]
RAB8A_DICDI1.830e-4977.57Ras-related protein Rab-8A n=2 Tax=Dictyostelium T... [more]
UPI000644CB811.940e-4884.04hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
RAB8B_DICDI5.170e-4879.80Ras-related protein Rab-8B n=1 Tax=Dictyostelium d... [more]
D3BL86_POLPP7.160e-4882.98Rab GTPase n=1 Tax=Polysphondylium pallidum (strai... [more]
UPI000644E6FC7.160e-4884.04hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A6U3B2I0_9EUKA1.080e-4474.53Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A1Y2HP65_9FUNG2.760e-4468.93Ras family-domain-containing protein n=1 Tax=Caten... [more]
A0A2P6N1S6_9EUKA3.690e-4473.47Rab GTPase n=1 Tax=Planoprotostelium fungivorum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 66..88
score: 45.13
coord: 31..44
score: 45.31
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 1..86
e-value: 0.0074
score: -80.1
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..91
e-value: 1.4E-13
score: 60.0
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 1..91
e-value: 5.5E-7
score: -11.2
NoneNo IPR availableGENE3D3.40.50.300coord: 1..96
e-value: 1.3E-30
score: 108.2
NoneNo IPR availablePANTHERPTHR24073:SF642coord: 1..96
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..96
NoneNo IPR availablePROSITEPS51419RABcoord: 1..114
score: 17.928
IPR001806Small GTPasePFAMPF00071Rascoord: 2..89
e-value: 2.8E-29
score: 101.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89458contigM-pyrifera_M_contig89458:255..680 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89458.20733.1mRNA_M-pyrifera_M_contig89458.20733.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig89458 255..698 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig89458.20733.1 ID=prot_M-pyrifera_M_contig89458.20733.1|Name=mRNA_M-pyrifera_M_contig89458.20733.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp
MGILLVYDVTDDKSFGNIRNWIRNIEQHATESVNKMLIGNKCDMVDKKVV
DTADGQKLADEYGIKFMETSAKNSINVDKAFITLAKDIKARLIDPNGPSG
GADPGVVDPTAPPK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase