prot_M-pyrifera_M_contig89407.20724.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig89407.20724.1
Unique Nameprot_M-pyrifera_M_contig89407.20724.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length111
Homology
BLAST of mRNA_M-pyrifera_M_contig89407.20724.1 vs. uniprot
Match: A0A3B4B212_9GOBI (DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) n=2 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4B212_9GOBI)

HSP 1 Score: 99.4 bits (246), Expect = 5.630e-22
Identity = 54/113 (47.79%), Postives = 68/113 (60.18%), Query Frame = 0
Query:    1 ASVSRGPPPRAPFFHRVPGTDFVVDGFRWRPRLG----FLSHFHSDHFVGLHQEYRGMIYTTALTARLVKRRLGVKNSQIHILRDDGEEEDVEGVGVRVLPANHCPGAVMFVF 109
            A+   G  P  PF+ ++PGT FVVD FR+ P  G    FL+HFHSDH+ GLH+     IY   +T  LVK +L V    +HIL  +  E  VEGV V +L ANHCPGA M +F
Sbjct:  565 AATGDGKYPCCPFYKKIPGTKFVVDAFRYGPVEGISTYFLTHFHSDHYDGLHKNSTFPIYCNKITGNLVKSKLRVPEQYVHILPMN-TEVTVEGVKVTLLDANHCPGAAMLLF 676          
BLAST of mRNA_M-pyrifera_M_contig89407.20724.1 vs. uniprot
Match: A0A8J9ZN42_BRALA (DCLRE1A protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZN42_BRALA)

HSP 1 Score: 99.0 bits (245), Expect = 7.670e-22
Identity = 51/105 (48.57%), Postives = 70/105 (66.67%), Query Frame = 0
Query:   10 RAPFFHRVPGTDFVVDGFRWRPRLG----FLSHFHSDHFVGLHQEYRGMIYTTALTARLVKRRLGVKNSQIHILRDDGEEEDVEGVGVRVLPANHCPGAVMFVFR 110
            + PF+ ++PGT FVVD FR+    G    FLSHFH DH+ GL + +R  IY++ +T  LVK+++ V +  +H L  D    DVEGV V +L ANHCPGAVMF+F+
Sbjct:  556 QCPFYKKIPGTTFVVDAFRYGSIPGCTAYFLSHFHYDHYQGLRKHFRHAIYSSKVTCNLVKKKIRVADRYLHPLPLD-TPCDVEGVQVTLLEANHCPGAVMFLFQ 659          
BLAST of mRNA_M-pyrifera_M_contig89407.20724.1 vs. uniprot
Match: UPI0008F98E5A (DNA cross-link repair 1A protein-like n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F98E5A)

HSP 1 Score: 98.6 bits (244), Expect = 1.050e-21
Identity = 55/112 (49.11%), Postives = 69/112 (61.61%), Query Frame = 0
Query:    4 SRGPPPR-APFFHRVPGTDFVVDGFRWRPRLG----FLSHFHSDHFVGLHQEYRGMIYTTALTARLVKRRLGVKNSQIHILRDDGEEEDVEGVGVRVLPANHCPGAVMFVFR 110
            S GPP R  PF+ R+P T FVVD F +    G    FLSHFHSDH++GL + +   IY + +TA LV  ++GVK   + IL    E   + GV V  L ANHCPGAVMF+FR
Sbjct:  621 SIGPPQRKCPFYKRIPDTTFVVDAFSYGIIPGITSYFLSHFHSDHYIGLRKSFNKPIYCSKITASLVMMKIGVKEEFLRILNLK-EPRIINGVEVTTLDANHCPGAVMFLFR 731          
BLAST of mRNA_M-pyrifera_M_contig89407.20724.1 vs. uniprot
Match: C3Y3U3_BRAFL (Lactamase_B domain-containing protein n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Y3U3_BRAFL)

HSP 1 Score: 96.7 bits (239), Expect = 1.820e-21
Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 0
Query:   10 RAPFFHRVPGTDFVVDGFRWRPRLG----FLSHFHSDHFVGLHQEYRGMIYTTALTARLVKRRLGVKNSQIHILRDDGEEEDVEGVGVRVLPANHCPGAVMFVFR 110
            + PF+ ++PGT FVVD FR+    G    FLSHFH DH+ GL + +R  IY++ +T  LVK+++ V +  +H L  +    DVEGV V +L ANHCPGAVMF+F+
Sbjct:   28 QCPFYKKIPGTTFVVDAFRYGTIPGCTAYFLSHFHYDHYQGLSKHFRHAIYSSKVTCNLVKKKIRVADRYLHPLPLN-TPCDVEGVQVTLLEANHCPGAVMFLFQ 131          
BLAST of mRNA_M-pyrifera_M_contig89407.20724.1 vs. uniprot
Match: UPI001603F1E0 (DNA cross-link repair protein SNM1-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001603F1E0)

HSP 1 Score: 96.7 bits (239), Expect = 4.930e-21
Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 0
Query:   10 RAPFFHRVPGTDFVVDGFRWRPRLG----FLSHFHSDHFVGLHQEYRGMIYTTALTARLVKRRLGVKNSQIHILRDDGEEEDVEGVGVRVLPANHCPGAVMFVFR 110
            + PF+ ++PGT FVVD FR+    G    FLSHFH DH+ GL + +R  IY++ +T  LVK+++ V +  +H L  +    DVEGV V +L ANHCPGAVMF+F+
Sbjct:  509 QCPFYKKIPGTTFVVDAFRYGTIPGCTAYFLSHFHYDHYQGLSKHFRHPIYSSKVTCNLVKKKIRVADRYLHPLALN-TPCDVEGVQVTLLEANHCPGAVMFLFQ 612          
BLAST of mRNA_M-pyrifera_M_contig89407.20724.1 vs. uniprot
Match: A0A7S3GK57_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GK57_9EUKA)

HSP 1 Score: 92.8 bits (229), Expect = 2.830e-20
Identity = 48/107 (44.86%), Postives = 66/107 (61.68%), Query Frame = 0
Query:   11 APFFHRVPGTDFVVDGFRWRPRLG------FLSHFHSDHFVGLHQEY-RGMIYTTALTARLVKRRLGVKNSQIHILRDDGEEEDVEGVGVRVLPANHCPGAVMFVFR 110
            AP +  +PGT   VD  R++   G      FLSHFHSDH+ GLH ++ RG+IY +  TARL    +GVK  +   + D+GE  +V+G  +  + ANHCPGAVMF+F 
Sbjct:   14 APHYKVIPGTKLTVDALRYQSVNGQKCRHYFLSHFHSDHYCGLHPDFDRGIIYASPPTARLAVMCIGVKVERFRTI-DEGEVIEVDGTNISTVSANHCPGAVMFIFE 119          
BLAST of mRNA_M-pyrifera_M_contig89407.20724.1 vs. uniprot
Match: UPI001455670C (uncharacterized protein LOC117294691 n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455670C)

HSP 1 Score: 94.0 bits (232), Expect = 4.450e-20
Identity = 52/112 (46.43%), Postives = 70/112 (62.50%), Query Frame = 0
Query:    2 SVSRGPPPRAPFFHRVPGTDFVVDGFRWRPRLG----FLSHFHSDHFVGLHQEYRGMIYTTALTARLVKRRLGVKNSQIHILRDDGEEEDVEGVGVRVLPANHCPGAVMFVF 109
            S  RG   + PF+ ++ GT FVVD FR+    G    FLSHFH DH+VGL + ++  IY + +TA LVK R+ V +  +H L  + E   V GV V +L ANHCPGAV+F+F
Sbjct:  964 SYGRGQQKQCPFYKKIQGTSFVVDAFRYGDIPGCNAYFLSHFHYDHYVGLTRHFQHPIYCSKITANLVKARIKVASKWLHDLPMN-EPCVVNGVEVTLLEANHCPGAVLFLF 1074          
BLAST of mRNA_M-pyrifera_M_contig89407.20724.1 vs. uniprot
Match: UPI00193CB919 (DNA cross-link repair protein SNM1-like isoform X1 n=2 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193CB919)

HSP 1 Score: 93.6 bits (231), Expect = 5.880e-20
Identity = 49/107 (45.79%), Postives = 68/107 (63.55%), Query Frame = 0
Query:    8 PPRAPFFHRVPGTDFVVDGFRWRPRLG----FLSHFHSDHFVGLHQEYRGMIYTTALTARLVKRRLGVKNSQIHILRDDGEEEDVEGVGVRVLPANHCPGAVMFVFR 110
            P   PF+ R+P T+FVVD F++    G    FLSHFHSDH++GL + +   IY + +TA LVK +LGV    I+++  + E   V GV V  L ANHCPG+VM +F+
Sbjct:  418 PKVCPFYKRIPDTNFVVDAFQYGSIPGVQAYFLSHFHSDHYIGLRKGFSHPIYCSKITANLVKMKLGVNERYINVINLN-ERTVVNGVEVVALDANHCPGSVMLLFQ 523          
BLAST of mRNA_M-pyrifera_M_contig89407.20724.1 vs. uniprot
Match: A0A6I9L792_PERMB (DNA cross-link repair 1A n=4 Tax=Peromyscus TaxID=10040 RepID=A0A6I9L792_PERMB)

HSP 1 Score: 93.6 bits (231), Expect = 5.990e-20
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 0
Query:   12 PFFHRVPGTDFVVDGFRWRPRLG----FLSHFHSDHFVGLHQEYRGMIYTTALTARLVKRRLGVKNSQIHILRDDGEEEDVEGVGVRVLPANHCPGAVMFVFR 110
            PF+ R+PGT F VD F++    G    FL+HFHSDH+ GL +++   IY + +T  L+K++L V+   +H L  D  E  V+GV V +L ANHCPGAVM +FR
Sbjct:  684 PFYKRIPGTGFTVDAFQYGEVAGCTAYFLTHFHSDHYAGLSKDFTLPIYCSEITGNLLKKKLRVQEQYVHQLPMD-TECTVDGVKVVLLDANHCPGAVMVLFR 785          
BLAST of mRNA_M-pyrifera_M_contig89407.20724.1 vs. uniprot
Match: A0A150GC40_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GC40_GONPE)

HSP 1 Score: 87.0 bits (214), Expect = 7.750e-20
Identity = 48/99 (48.48%), Postives = 66/99 (66.67%), Query Frame = 0
Query:   17 VPGTDFVVDGFRWRP---RLGFLSHFHSDHFVGLHQEYRG-MIYTTALTARLVKRRLGVKNSQIHILRDDGEEEDVEGVGVRVLPANHCPGAVMFVFRV 111
            +PGTDF+VDGF ++    R  FL+HFHSDH VGL + +RG +IY + +TARL+   +G++   +  L + G    +E V V  L ANHCPGAVMF+F V
Sbjct:   11 IPGTDFIVDGFAFQSPKCRHYFLTHFHSDHTVGLSRSFRGGIIYCSPVTARLLIHDMGMRPQVVRPL-EVGVPVIIESVRVTPLDANHCPGAVMFLFEV 108          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89407.20724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3B4B212_9GOBI5.630e-2247.79DNA cross-link repair 1A (PSO2 homolog, S. cerevis... [more]
A0A8J9ZN42_BRALA7.670e-2248.57DCLRE1A protein n=1 Tax=Branchiostoma lanceolatum ... [more]
UPI0008F98E5A1.050e-2149.11DNA cross-link repair 1A protein-like n=1 Tax=Bemi... [more]
C3Y3U3_BRAFL1.820e-2147.62Lactamase_B domain-containing protein n=2 Tax=Bran... [more]
UPI001603F1E04.930e-2147.62DNA cross-link repair protein SNM1-like n=1 Tax=Br... [more]
A0A7S3GK57_9EUKA2.830e-2044.86Hypothetical protein (Fragment) n=1 Tax=Palpitomon... [more]
UPI001455670C4.450e-2046.43uncharacterized protein LOC117294691 n=1 Tax=Aster... [more]
UPI00193CB9195.880e-2045.79DNA cross-link repair protein SNM1-like isoform X1... [more]
A0A6I9L792_PERMB5.990e-2046.60DNA cross-link repair 1A n=4 Tax=Peromyscus TaxID=... [more]
A0A150GC40_GONPE7.750e-2048.48Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 9..111
e-value: 2.2E-27
score: 97.9
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 35..110
NoneNo IPR availablePANTHERPTHR23240:SF6DNA CROSS-LINK REPAIR 1A PROTEINcoord: 10..110
NoneNo IPR availablePANTHERPTHR23240DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATEDcoord: 10..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89407contigM-pyrifera_M_contig89407:467..799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89407.20724.1mRNA_M-pyrifera_M_contig89407.20724.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig89407 467..799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig89407.20724.1 ID=prot_M-pyrifera_M_contig89407.20724.1|Name=mRNA_M-pyrifera_M_contig89407.20724.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp
ASVSRGPPPRAPFFHRVPGTDFVVDGFRWRPRLGFLSHFHSDHFVGLHQE
YRGMIYTTALTARLVKRRLGVKNSQIHILRDDGEEEDVEGVGVRVLPANH
CPGAVMFVFRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036866RibonucZ/Hydroxyglut_hydro