prot_M-pyrifera_M_contig8939.20715.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8939.20715.1
Unique Nameprot_M-pyrifera_M_contig8939.20715.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length288
Homology
BLAST of mRNA_M-pyrifera_M_contig8939.20715.1 vs. uniprot
Match: D8LNF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNF5_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 4.470e-100
Identity = 163/256 (63.67%), Postives = 189/256 (73.83%), Query Frame = 0
Query:   31 DGVDGGPPPAKVAKPGSASPDDEDAKLDVKAAMKGQDKKYAVEGSRLGPTDSERVEEEALRSAGLAVGSRIEVMWVLEDDDKSVEKWWGCSVTGAKTGERGGDEGESLPVFTLHYDAFQAFEEADHDVCFVDKYRLLHLEDGAEMTWKMEGKEVDREAILASLSXXXXXXXXXXXXXXXXXADEGGESIETQSMNALAQLPHHQQMAMAAGYRRMADVVKQHLRAKM-QGGGDAVVSAADVENMFRDVRAGVGGNG 285
            DG   GPP +K +KP S+    +D      A+  G       EG++  PTDSERVE E LRS GLAVG+R+EVMW+LEDDDKSVEKWWGCSV GAKTGER  DE E  PVFTLHYDA++AFEEADHDVCFVD+YRL+HLEDGAEMTWK EG+EVDREA+LASL+                 A+EG ES+ET+SM A+AQLP HQQ AM AGYRRMADV+K+HLRAK+ Q GG+ VVS ADVENMFRDVR   G +G
Sbjct:   35 DGPGTGPPASKTSKPNSSEDKKKDEVQPTPASGGGVVVPVTAEGAQ--PTDSERVEAECLRSLGLAVGTRLEVMWLLEDDDKSVEKWWGCSVAGAKTGER--DEEEGRPVFTLHYDAYEAFEEADHDVCFVDRYRLVHLEDGAEMTWKREGEEVDREAVLASLADEDVNLQEVMAAQEEEDANEGAESVETRSMKAIAQLPPHQQAAMMAGYRRMADVIKKHLRAKITQTGGETVVSEADVENMFRDVRGSGGSSG 286          
BLAST of mRNA_M-pyrifera_M_contig8939.20715.1 vs. uniprot
Match: A0A7S2YY04_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2YY04_9CHLO)

HSP 1 Score: 70.5 bits (171), Expect = 2.560e-10
Identity = 56/214 (26.17%), Postives = 90/214 (42.06%), Query Frame = 0
Query:   90 LRSAGLAVGSRIEVMWVLEDDDK-------SVEK-WWGCSVTGA--KTGERGGDEGE-----SLPV-----FTLHYDAFQAFEEADHDVCFVDKYRLLHLEDGAEMTWKMEGKEVDREAILASLSXXXXXXXXXXXXXXXXXADEGGESIETQSMNALAQLPHHQQMAMAAGYRRMADVVKQHLRAKMQGGGDAVV-SAADVENMFRDVRAGVG 282
            ++  GL +GS IEV+W +   D        S+++ WW   +     K G+    EG+     SLP      + L Y  ++AFEE +  V F+D + LL  +D   + W+ +G + + E                         D  G    ++ M  L ++P  +Q   A+ YR MAD  KQ LR  ++  G+  V    DV  M   ++   G
Sbjct:   96 VKDLGLRIGSTIEVLWEIASPDAVDATGEASLDRVWWAGQLVAEEEKEGQEEVQEGQEAEAGSLPFAASSKWRLRYQKYEAFEEEERTVVFLDPHLLLDFDDMQVLEWREDGSDYEPEM------RQRPEFAAAERDDVVAIGDMAGADAVSEGMRELNKMPFDKQQIFASSYRVMADSFKQKLREILKNKGEGYVFGEEDVRTMIEGIKQQTG 303          
BLAST of mRNA_M-pyrifera_M_contig8939.20715.1 vs. uniprot
Match: A0A7S2YY33_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2YY33_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 1.270e-7
Identity = 47/181 (25.97%), Postives = 74/181 (40.88%), Query Frame = 0
Query:  115 EKWWGCSVTGA--KTGERGGDEGE-----SLPV-----FTLHYDAFQAFEEADHDVCFVDKYRLLHLEDGAEMTWKMEGKEVDREAILASLSXXXXXXXXXXXXXXXXXADEGGESIETQSMNALAQLPHHQQMAMAAGYRRMADVVKQHLRAKMQGGGDAVV-SAADVENMFRDVRAGVG 282
            E+WW   +     K G+    EG+     SLP      + L Y  ++AFEE +  V F+D + LL  +D   + W+ +G + + E                         D  G    ++ M  L ++P  +Q   A+ YR MAD  KQ LR  ++  G+  V    DV  M   ++   G
Sbjct:    3 EQWWAGQLVAEEEKEGQEEVQEGQEAEAGSLPFAASSKWRLRYQKYEAFEEEERTVVFLDPHLLLDFDDMQVLEWREDGSDYEPEM------RQRPEFAAAERDDVVAIGDMAGADAVSEGMRELNKMPFDKQQIFASSYRVMADSFKQKLREILKNKGEGYVFGEEDVRTMIEGIKQQTG 177          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8939.20715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LNF5_ECTSI4.470e-10063.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2YY04_9CHLO2.560e-1026.17Hypothetical protein n=1 Tax=Chloropicon laureae T... [more]
A0A7S2YY33_9CHLO1.270e-725.97Hypothetical protein n=1 Tax=Chloropicon laureae T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8939contigM-pyrifera_M_contig8939:3506..9061 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8939.20715.1mRNA_M-pyrifera_M_contig8939.20715.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8939 3506..9061 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8939.20715.1 ID=prot_M-pyrifera_M_contig8939.20715.1|Name=mRNA_M-pyrifera_M_contig8939.20715.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=288bp
MSSDAAAPTPSATGEQQGGKRAPEQDSSNQDGVDGGPPPAKVAKPGSASP
DDEDAKLDVKAAMKGQDKKYAVEGSRLGPTDSERVEEEALRSAGLAVGSR
IEVMWVLEDDDKSVEKWWGCSVTGAKTGERGGDEGESLPVFTLHYDAFQA
FEEADHDVCFVDKYRLLHLEDGAEMTWKMEGKEVDREAILASLSGEDVDL
QEVIAAQNEEDADEGGESIETQSMNALAQLPHHQQMAMAAGYRRMADVVK
QHLRAKMQGGGDAVVSAADVENMFRDVRAGVGGNGAV*
back to top