prot_M-pyrifera_M_contig8939.20714.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8939.20714.1
Unique Nameprot_M-pyrifera_M_contig8939.20714.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length157
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig8939.20714.1 vs. uniprot
Match: A0A6H5JLT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT0_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 4.690e-23
Identity = 73/169 (43.20%), Postives = 96/169 (56.80%), Query Frame = 0 
Query:    9 LYCSAREAIKEAAAAPAASPVPGGSGKHNDEATPGRPE----LELHLERLVQETHHSSVVAQ--------------------ERPDVSRRARQDSGHEQEAASIGEAGDTVEAGEDECLGVLAEAFADELDDLRKDEHFRGSARDVDAMADMMRCLAGGLDVTEQRLLL 153
            LY +AR+AI++A+A  AA+     +G+  D     RP+    L+  L R V+E + S+   Q                    +R D   +  +D+G     AS GE G      EDECLG++AEAFAD+LD LRKDEHF GSA D+ AMADMMRC+AGGLD  EQR+LL
Sbjct:   10 LYDAARQAIRDASAGGAATEA---AGRDQDAYVAKRPQHNDLLDKKLHRSVEEMYQSTRGEQNSAQGTQDVQFSGISGNKKRQRHDEVEKPAEDAGD----ASGGEEGHATTQ-EDECLGLMAEAFADDLDLLRKDEHFGGSANDIAAMADMMRCIAGGLDSIEQRMLL 170
[Close]
BLAST of mRNA_M-pyrifera_M_contig8939.20714.1 vs. uniprot
Match: D8LNF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF4_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 1.950e-17
Identity = 67/154 (43.51%), Postives = 86/154 (55.84%), Query Frame = 0 
Query:    9 LYCSAREAIKEAAAAPAASPVPGGSGKHNDEATPGRPE----LELHLERLVQETHHSS-----VVAQERPDVSRRARQDSG--------HEQEAASIGEAGDTVEAGE-------DECLGVLAEAFADELDDLRKDEHFRGSARDVDAMADMMR 138
            LY +AREAI++A+A  AA+      G+  D     RP+    L+  L R V+E +HS+        Q  PDV   A  DSG        H+ E A   +AGD  +  E       DECLG++AEAFAD+LD LRKD+HF GSA D+ AMADMMR
Sbjct:   10 LYDAAREAIRDASAGGAAAEA---VGRDQDACVATRPQHDDVLDKKLHRSVEEMYHSTRGQQNSSTQGTPDVQLSA-SDSGVGNKKRQRHDGEEAPTEDAGDASDGEEGHPTTQEDECLGLMAEAFADDLDLLRKDDHFGGSANDIAAMADMMR 159
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8939.20714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLT0_9PHAE4.690e-2343.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNF4_ECTSI1.950e-1743.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8939contigM-pyrifera_M_contig8939:1365..2861 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8939.20714.1mRNA_M-pyrifera_M_contig8939.20714.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8939 1365..2861 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8939.20714.1 ID=prot_M-pyrifera_M_contig8939.20714.1|Name=mRNA_M-pyrifera_M_contig8939.20714.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=157bp
MAAAPYWGLYCSAREAIKEAAAAPAASPVPGGSGKHNDEATPGRPELELH
LERLVQETHHSSVVAQERPDVSRRARQDSGHEQEAASIGEAGDTVEAGED
ECLGVLAEAFADELDDLRKDEHFRGSARDVDAMADMMRCLAGGLDVTEQR
LLLGTR*
back to top