mRNA_M-pyrifera_M_contig109919.2071.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig109919.2071.1
Unique NamemRNA_M-pyrifera_M_contig109919.2071.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig109919.2071.1 vs. uniprot
Match: A0A8J4PQ94_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PQ94_9MYCE)

HSP 1 Score: 250 bits (639), Expect = 1.010e-73
Identity = 128/202 (63.37%), Postives = 157/202 (77.72%), Query Frame = 1 
Query:    1 ISVFTEGMLAMETTLVGVVEVDPKKLLEDGIRKELVDHIAKIMDSTLVM-GSRAPEELARRANELAGKLDGFRRSFQYVQDYISIYGLKLWQEEFSRIINFNVEQECNSFLRKTV-DPRSQYQSDTIKIPVFPRVDRDSINFVGRLARELMRLTNCRSTTYLGQKSGWYSAERGVELIGIRTFTLLVNSVGVFGVMGLDKLF 600
            +SVFTEG+LAMETTLVG+++VDPK+LLEDGIRKELV  IA+ MD TLV    +  +EL  R  ELA  LDGFRRSFQY+QDY++I GL++WQEEFSRI+NF VEQECNSFL+K + D +S YQS  I IP FP VD+ S+N +GRLAREL+  TNC++T YL Q  GW+    G ELIGI T++LL   VG+FG+ GLDKLF
Sbjct:  666 VSVFTEGILAMETTLVGIIQVDPKQLLEDGIRKELVLQIAQAMDKTLVFKNQKQQDELQSRLKELANILDGFRRSFQYIQDYVNIQGLRIWQEEFSRIVNFYVEQECNSFLKKKIYDWQSSYQSVAIPIPKFPSVDQSSVNMIGRLARELLNQTNCKTTLYLNQ-IGWFEPTTGKELIGISTWSLLHQGVGIFGLTGLDKLF 866
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BLAST of mRNA_M-pyrifera_M_contig109919.2071.1 vs. uniprot
Match: A0A151ZHN6_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZHN6_9MYCE)

HSP 1 Score: 245 bits (625), Expect = 9.030e-72
Identity = 128/205 (62.44%), Postives = 159/205 (77.56%), Query Frame = 1 
Query:    1 ISVFTEGMLAMETTLVGVVEVDPKKLLEDGIRKELVDHIAKIMDSTLVMG----SRAPEELARRANELAGKLDGFRRSFQYVQDYISIYGLKLWQEEFSRIINFNVEQECNSFLRKTV-DPRSQYQSDTIKIPVFPRVDRDSINFVGRLARELMRLTNCRSTTYLGQKSGWYSAERGVELIGIRTFTLLVNSVGVFGVMGLDKLF 600
            ISVFTEG+LAMETTLVG+V+VDPK+LLEDGIRKELV  IA+ MD TLV      S+   ELA +  ELA  LDGFRRSFQY+QDY++I GL++WQEEFSRI+N+ VEQECNSFL+K + D +S YQS  I IP FP VD  SIN +GRLAREL++ TNC++T YL Q  GW+  +   EL+G+ T++LL  SVG+FG+ GLDKL+
Sbjct:  668 ISVFTEGILAMETTLVGIVQVDPKQLLEDGIRKELVLQIAQAMDRTLVFQRNQKSQDGLELANKLTELANILDGFRRSFQYIQDYVNIQGLRIWQEEFSRIVNYYVEQECNSFLKKKIYDRQSTYQSVAIPIPKFPTVDPQSINMIGRLARELLQQTNCKTTLYLNQ-IGWFDPQNQKELVGVGTWSLLHQSVGIFGLTGLDKLY 871
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BLAST of mRNA_M-pyrifera_M_contig109919.2071.1 vs. uniprot
Match: F4PMG8_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PMG8_CAVFA)

HSP 1 Score: 240 bits (613), Expect = 4.020e-70
Identity = 125/203 (61.58%), Postives = 156/203 (76.85%), Query Frame = 1 
Query:    1 ISVFTEGMLAMETTLVGVVEVDPKKLLEDGIRKELVDHIAKIMDSTLVMGSR--APEELARRANELAGKLDGFRRSFQYVQDYISIYGLKLWQEEFSRIINFNVEQECNSFLRKTV-DPRSQYQSDTIKIPVFPRVDRDSINFVGRLARELMRLTNCRSTTYLGQKSGWYSAERGVELIGIRTFTLLVNSVGVFGVMGLDKLF 600
            +SVFTEG+LAMETTLVGV+EVDPK+LLEDGIRKELV  I+  MD TLV  ++  + +EL  R  ELA  LDGFRRSFQY+QDY++I GL++WQEEFSRI+N+ VEQECN FL+K V D +S YQS  I IP FP VD  S+  +GRLAREL+  T+CR+T YL Q  GW+  +   EL+GI T++LL  SVG+FG+ GLDKL+
Sbjct:  667 VSVFTEGILAMETTLVGVIEVDPKQLLEDGIRKELVLQISMAMDKTLVFRNQKNSNDELQLRLKELANILDGFRRSFQYIQDYVNIPGLRIWQEEFSRIVNYYVEQECNQFLKKKVYDWQSNYQSVAIPIPRFPTVDAASVTMIGRLARELLNQTSCRTTLYLNQ-IGWFEPQTSKELVGINTWSLLQQSVGIFGLTGLDKLY 868
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BLAST of mRNA_M-pyrifera_M_contig109919.2071.1 vs. uniprot
Match: WASC5_DICDI (WASH complex subunit 5 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=WASC5_DICDI)

HSP 1 Score: 240 bits (613), Expect = 4.290e-70
Identity = 129/216 (59.72%), Postives = 159/216 (73.61%), Query Frame = 1 
Query:    1 ISVFTEGMLAMETTLVGVVEVDPKKLLEDGIRKELVDHIAKIMDSTLVMGSR---APE--------ELARRANELAGKLDGFRRSFQYVQDYISIYGLKLWQEEFSRIINFNVEQECNSFLRKTV-DPRSQYQSDTIKIPVFP----RVDRDSINFVGRLARELMRLTNCRSTTYLGQKSGWYSAERGVELIGIRTFTLLVNSVGVFGVMGLDKLF 600
            +SVFTEG+LAMETTLVG++EVDPK+LLEDGIRKELV  IA  MD TL+   +   AP         EL +R  EL+  LDGFRRSFQY+QDY++I GLK+WQEEFSRI+NF VEQECNSFL+K V D +SQYQS  I IP FP    +  + S+N +GRLAREL+  TNC++T YL Q  GW+    G EL+GI T+++L  SVG+FG+ GLDKLF
Sbjct:  668 VSVFTEGILAMETTLVGIIEVDPKQLLEDGIRKELVLQIALAMDKTLIFSGKPYQAPSNKQQQQEIELLQRLKELSNILDGFRRSFQYIQDYVNIQGLKIWQEEFSRIVNFYVEQECNSFLKKKVYDWQSQYQSVAIPIPKFPSQSDQNSQQSVNMIGRLARELLNQTNCKTTLYLNQ-IGWFDPSSGKELVGINTWSILHQSVGIFGLTGLDKLF 882
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BLAST of mRNA_M-pyrifera_M_contig109919.2071.1 vs. uniprot
Match: UPI000644BAF6 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644BAF6)

HSP 1 Score: 240 bits (612), Expect = 5.530e-70
Identity = 125/203 (61.58%), Postives = 157/203 (77.34%), Query Frame = 1 
Query:    1 ISVFTEGMLAMETTLVGVVEVDPKKLLEDGIRKELVDHIAKIMDSTLVMGS--RAPEELARRANELAGKLDGFRRSFQYVQDYISIYGLKLWQEEFSRIINFNVEQECNSFLRKTV-DPRSQYQSDTIKIPVFPRVDRDSINFVGRLARELMRLTNCRSTTYLGQKSGWYSAERGVELIGIRTFTLLVNSVGVFGVMGLDKLF 600
            +SVFTEG+LAMETTLVGV+EVDPK+LLEDGIRKELV  I+  MD TLV  +  +  +EL  R  EL+  LDGFRRSFQY+QDY++I GL++WQEEFSRI+N+ VEQECN FL+K V D +S YQS  I IP FP VD+ S+N +GRL REL++ T+CR+T YL Q  GW+    G EL+GI T+T+L  SVG+FG+ GLDKL+
Sbjct:  670 VSVFTEGILAMETTLVGVIEVDPKQLLEDGIRKELVLQISMAMDRTLVFRNEKKGVDELHPRLKELSNILDGFRRSFQYIQDYVNIQGLRIWQEEFSRIVNYYVEQECNQFLKKKVFDYQSSYQSVAIPIPRFPSVDQ-SVNMIGRLGRELLQQTSCRNTLYLNQ-IGWFDPSTGKELVGINTWTMLQQSVGIFGLTGLDKLY 870
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BLAST of mRNA_M-pyrifera_M_contig109919.2071.1 vs. uniprot
Match: L8GQI3_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQI3_ACACA)

HSP 1 Score: 240 bits (612), Expect = 6.550e-70
Identity = 122/200 (61.00%), Postives = 155/200 (77.50%), Query Frame = 1 
Query:    1 ISVFTEGMLAMETTLVGVVEVDPKKLLEDGIRKELVDHIAKIMDSTLVMGSRAPEELARRANELAGKLDGFRRSFQYVQDYISIYGLKLWQEEFSRIINFNVEQECNSFLR-KTVDPRSQYQSDTIKIPVFPRVDRDSINFVGRLARELMRLTNCRSTTYLGQKSGWYSAERGVELIGIRTFTLLVNSVGVFGVMGLDKL 597
            +S FTEG+LAM+TTLVG+++V+PK+LLE+GIRKELV  +A  MD  L+  +   +E   R  +LA +LDGF RSFQY+QDY++IYGLK+WQEEFSRI+N+NVEQECNSFL+ K  D +S YQS  I IP FP VD +S+NF+GRLAR L++ TN  +T +L Q S WY  + G ELIGIRTF LL+ SVGVFGV GLD+L
Sbjct:  704 VSKFTEGILAMQTTLVGIIKVEPKQLLEEGIRKELVFKLASAMDKILIFKTGKIDEFESRLKQLASQLDGFSRSFQYIQDYVNIYGLKIWQEEFSRIVNYNVEQECNSFLKTKVYDHQSMYQSTAIPIPRFPSVD-NSVNFIGRLARALLQHTNYNNTIFLDQMSAWYDKD-GRELIGIRTFDLLLRSVGVFGVSGLDRL 901
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BLAST of mRNA_M-pyrifera_M_contig109919.2071.1 vs. uniprot
Match: F0ZIN4_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZIN4_DICPU)

HSP 1 Score: 238 bits (608), Expect = 2.000e-69
Identity = 126/208 (60.58%), Postives = 157/208 (75.48%), Query Frame = 1 
Query:    1 ISVFTEGMLAMETTLVGVVEVDPKKLLEDGIRKELVDHIAKIMDSTLVMGSR--APEELARRANELAGKLDGFRRSFQYVQDYISIYGLKLWQEEFSRIINFNVEQECNSFLRKTV-DPRSQYQSDTIKIPVFPRVDRD-----SINFVGRLARELMRLTNCRSTTYLGQKSGWYSAERGVELIGIRTFTLLVNSVGVFGVMGLDKLF 600
            +SVFTEG+LAMETTLVG++EVDPK+LLEDGIRKELV  IA+ MD TLV  S+    +EL +R  EL+  LDGFRRSFQY+QDY++I GLK+WQEEFSRI+NF VEQECNSFL+K + D +S +QS  I IP F     D     S+N +GRLAREL+  TNC++T YL Q  GW+    G EL+GI T+++L  SVG+FG+ GLDKLF
Sbjct:  666 VSVFTEGILAMETTLVGIIEVDPKQLLEDGIRKELVLQIAQAMDRTLVFNSKNQKQDELLQRLRELSNILDGFRRSFQYIQDYVNIQGLKIWQEEFSRIVNFYVEQECNSFLKKKIYDWQSSFQSVAIPIPRFAPPPGDNGPVQSVNMIGRLARELLNQTNCKNTLYLNQ-IGWFDPNTGKELVGINTWSVLHQSVGIFGLTGLDKLF 872
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BLAST of mRNA_M-pyrifera_M_contig109919.2071.1 vs. uniprot
Match: UPI000C6DD7BC (WASH complex subunit 5-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6DD7BC)

HSP 1 Score: 229 bits (584), Expect = 1.130e-68
Identity = 114/201 (56.72%), Postives = 154/201 (76.62%), Query Frame = 1 
Query:    1 ISVFTEGMLAMETTLVGVVEVDPKKLLEDGIRKELVDHIAKIMDSTLVMGSRAPE-ELARRANELAGKLDGFRRSFQYVQDYISIYGLKLWQEEFSRIINFNVEQECNSFLR-KTVDPRSQYQSDTIKIPVFPRVDRDSINFVGRLARELMRLTNCRSTTYLGQKSGWYSAERGVELIGIRTFTLLVNSVGVFGVMGLDKL 597
            ISVFTEG+L M+ TLVG++++DPK+LLEDGIRKELV  +A  +++ LV  S+A   EL  +  EL   +DGFRRSF+Y+QDY+SIYGLK+WQEE SRIIN+N+EQECN+FLR K  D +S YQS TI IP FP +D  S+NF+GRLARE++R+T+ ++T YL Q S WY ++   E+I +R F+L+  +VG  G+ GLD+L
Sbjct:  355 ISVFTEGILMMKCTLVGIIQIDPKQLLEDGIRKELVKRVASALNNRLVFNSKAKSSELIPKLEELGQVMDGFRRSFEYIQDYVSIYGLKIWQEEVSRIINYNIEQECNAFLRHKVQDWQSIYQSRTIPIPRFPSLDNVSVNFIGRLAREILRITDPKTTIYLDQMSCWYDSKTKNEIINLRLFSLIQKTVGTPGLTGLDRL 555
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BLAST of mRNA_M-pyrifera_M_contig109919.2071.1 vs. uniprot
Match: A7T1T2_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7T1T2_NEMVE)

HSP 1 Score: 229 bits (585), Expect = 3.140e-68
Identity = 117/201 (58.21%), Postives = 152/201 (75.62%), Query Frame = 1 
Query:    1 ISVFTEGMLAMETTLVGVVEVDPKKLLEDGIRKELVDHIAKIMDSTLVMGSRAPE-ELARRANELAGKLDGFRRSFQYVQDYISIYGLKLWQEEFSRIINFNVEQECNSFLRKTV-DPRSQYQSDTIKIPVFPRVDRDSINFVGRLARELMRLTNCRSTTYLGQKSGWYSAERGVELIGIRTFTLLVNSVGVFGVMGLDKL 597
            ISVFTEG+L M+TTLVG+++VDPK+LLEDGIRKELV  +A+ +   L+   +A + EL+ R  EL  K+DGF+RSF+Y+QDYI+IYGLK+WQEE SRIIN+NVEQECNSFLR+ V D +S YQS  I IP FPRVD +S+NF+GRLARE++R+T+ R T Y+ Q   WY +    E++ +     L  SVG FG+ GLDKL
Sbjct:  202 ISVFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVQQVAQALHFGLIFNPKAKQSELSARLRELGEKMDGFKRSFEYIQDYINIYGLKIWQEEISRIINYNVEQECNSFLREKVHDWQSIYQSTAIPIPKFPRVD-ESVNFIGRLAREILRITDPRVTCYIDQMGAWYDSRTKQEVMNLLIIRQLQQSVGTFGLTGLDKL 401
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BLAST of mRNA_M-pyrifera_M_contig109919.2071.1 vs. uniprot
Match: A0A6P8HA80_ACTTE (WASH complex subunit 5-like n=2 Tax=Actiniaria TaxID=6103 RepID=A0A6P8HA80_ACTTE)

HSP 1 Score: 234 bits (596), Expect = 9.110e-68
Identity = 119/201 (59.20%), Postives = 151/201 (75.12%), Query Frame = 1 
Query:    1 ISVFTEGMLAMETTLVGVVEVDPKKLLEDGIRKELVDHIAKIMDSTLVMGSRAP-EELARRANELAGKLDGFRRSFQYVQDYISIYGLKLWQEEFSRIINFNVEQECNSFLR-KTVDPRSQYQSDTIKIPVFPRVDRDSINFVGRLARELMRLTNCRSTTYLGQKSGWYSAERGVELIGIRTFTLLVNSVGVFGVMGLDKL 597
            ISVFTEG+L M+TTLVG+++VDPK+LLEDGIRKELV  +A  +   L+   RA   EL  +  EL GK+DGFRRSF+Y+QDYI+IYGLK+WQEE SRIIN+NVEQECNSFLR K +D +S YQS TI IP FPRVD +S+NF+GRLARE++R+T+ ++T Y+ Q   WY      E + +     L  SVG FG++GLDKL
Sbjct:  677 ISVFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVRQVAMALHQGLIFNPRAKVSELPIKLKELGGKMDGFRRSFEYIQDYINIYGLKIWQEEISRIINYNVEQECNSFLREKVLDWQSIYQSTTIPIPKFPRVD-ESVNFIGRLAREILRITDTKTTCYIDQMGAWYDTRTKQEAMNLLILRQLQQSVGTFGLIGLDKL 876
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109919.2071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J4PQ94_9MYCE1.010e-7363.37Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
A0A151ZHN6_9MYCE9.030e-7262.44Uncharacterized protein n=1 Tax=Tieghemostelium la... [more]
F4PMG8_CAVFA4.020e-7061.58Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]
WASC5_DICDI4.290e-7059.72WASH complex subunit 5 n=1 Tax=Dictyostelium disco... [more]
UPI000644BAF65.530e-7061.58hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
L8GQI3_ACACA6.550e-7061.00Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
F0ZIN4_DICPU2.000e-6960.58Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
UPI000C6DD7BC1.130e-6856.72WASH complex subunit 5-like n=1 Tax=Centruroides s... [more]
A7T1T2_NEMVE3.140e-6858.21Predicted protein n=2 Tax=Nematostella vectensis T... [more]
A0A6P8HA80_ACTTE9.110e-6859.20WASH complex subunit 5-like n=2 Tax=Actiniaria Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig109919contigM-pyrifera_M_contig109919:2..601 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score226.9
Seed ortholog evalue8.2e-57
Seed eggNOG ortholog44689.DDB0234050
Preferred nameKIAA0196
KEGG koko:K18464
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000212,GO:0000226,GO:0000280,GO:0000902,GO:0000904,GO:0000910,GO:0001556,GO:0003006,GO:0003008,GO:0003013,GO:0003015,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005769,GO:0006810,GO:0006873,GO:0006885,GO:0006887,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007049,GO:0007051,GO:0007143,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007399,GO:0007409,GO:0008015,GO:0008150,GO:0008154,GO:0009653,GO:0009987,GO:0009994,GO:0010720,GO:0010975,GO:0010976,GO:0012505,GO:0016043,GO:0016192,GO:0016197,GO:0019725,GO:0019953,GO:0021700,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030003,GO:0030004,GO:0030029,GO:0030030,GO:0030036,GO:0030041,GO:0030154,GO:0030155,GO:0030182,GO:0030641,GO:0031175,GO:0031344,GO:0031346,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0032501,GO:0032502,GO:0032504,GO:0032940,GO:0032989,GO:0032990,GO:0032991,GO:0033206,GO:0034622,GO:0036477,GO:0040038,GO:0042592,GO:0042632,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044655,GO:0044703,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045785,GO:0045852,GO:0046903,GO:0046907,GO:0048285,GO:0048468,GO:0048469,GO:0048477,GO:0048518,GO:0048522,GO:0048599,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048878,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051225,GO:0051234,GO:0051239,GO:0051240,GO:0051258,GO:0051301,GO:0051321,GO:0051453,GO:0051454,GO:0051641,GO:0051649,GO:0051704,GO:0051960,GO:0051962,GO:0055067,GO:0055080,GO:0055082,GO:0055088,GO:0055092,GO:0060047,GO:0060284,GO:0061564,GO:0061640,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070925,GO:0071203,GO:0071695,GO:0071840,GO:0090306,GO:0090382,GO:0097435,GO:0097458,GO:0097708,GO:0098771,GO:0120025,GO:0120035,GO:0120036,GO:0120039,GO:0140013,GO:1903046,GO:2000026
EggNOG free text desc.Hereditary spastic paraplegia protein strumpellin
EggNOG OGs3X83K@554915,KOG3666@1,KOG3666@2759
COG Functional cat.S
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons1
Model size600
Cds size579
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815609.7169192-UTR-M-pyrifera_M_contig109919:1..221622815609.7169192-UTR-M-pyrifera_M_contig109919:1..22Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig109919 2..22 +
1692277486.054272-UTR-M-pyrifera_M_contig109919:1..221692277486.054272-UTR-M-pyrifera_M_contig109919:1..22Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig109919 2..22 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815609.7294762-CDS-M-pyrifera_M_contig109919:22..6011622815609.7294762-CDS-M-pyrifera_M_contig109919:22..601Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig109919 23..601 +
1692277486.0722814-CDS-M-pyrifera_M_contig109919:22..6011692277486.0722814-CDS-M-pyrifera_M_contig109919:22..601Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig109919 23..601 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig109919.2071.1prot_M-pyrifera_M_contig109919.2071.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig109919 23..601 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig109919.2071.1

>prot_M-pyrifera_M_contig109919.2071.1 ID=prot_M-pyrifera_M_contig109919.2071.1|Name=mRNA_M-pyrifera_M_contig109919.2071.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp
MLAMETTLVGVVEVDPKKLLEDGIRKELVDHIAKIMDSTLVMGSRAPEEL
ARRANELAGKLDGFRRSFQYVQDYISIYGLKLWQEEFSRIINFNVEQECN
SFLRKTVDPRSQYQSDTIKIPVFPRVDRDSINFVGRLARELMRLTNCRST
TYLGQKSGWYSAERGVELIGIRTFTLLVNSVGVFGVMGLDKLF
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mRNA from alignment at M-pyrifera_M_contig109919:2..601+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig109919.2071.1 ID=mRNA_M-pyrifera_M_contig109919.2071.1|Name=mRNA_M-pyrifera_M_contig109919.2071.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig109919:2..601+ (Macrocystis pyrifera P11B4 male)
ATCTCGGTCTTCACTGAGGGCATGCTTGCCATGGAGACGACGCTGGTGGG
CGTCGTCGAGGTGGACCCCAAGAAGCTGCTCGAGGACGGCATCCGCAAGG
AGCTGGTCGACCACATCGCTAAGATCATGGACTCAACGTTGGTGATGGGC
TCGCGCGCGCCCGAGGAGCTGGCGAGGCGGGCCAACGAACTGGCCGGCAA
GCTGGACGGCTTCCGTCGCTCCTTCCAGTACGTGCAGGACTACATCAGCA
TCTACGGCCTCAAGCTGTGGCAGGAGGAGTTCTCGCGCATCATCAACTTC
AACGTGGAGCAGGAGTGCAACAGCTTCCTCCGCAAGACTGTCGACCCGCG
CAGCCAGTACCAGTCGGACACGATCAAGATCCCCGTCTTCCCGCGCGTCG
ATCGCGACTCCATCAACTTCGTGGGAAGGCTGGCGCGCGAGCTCATGCGC
CTCACCAACTGCCGCAGCACCACCTACCTGGGCCAGAAGAGCGGCTGGTA
CTCGGCAGAGCGCGGCGTAGAGCTCATCGGCATCCGCACCTTCACGCTGC
TCGTCAACAGCGTGGGAGTCTTCGGCGTGATGGGCCTGGACAAGCTCTTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig109919:2..601+

>mRNA_M-pyrifera_M_contig109919.2071.1 ID=mRNA_M-pyrifera_M_contig109919.2071.1|Name=mRNA_M-pyrifera_M_contig109919.2071.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1158bp|location=Sequence derived from alignment at M-pyrifera_M_contig109919:2..601+ (Macrocystis pyrifera P11B4 male)
ATGCTTGCCATGGAGACGACGCTGGTGGGCGTCGTCGAGGTGGACCCCAA
GAAGCTGCTCGAGGACGGCATCCGCAAGGAGCTGGTCGACCACATCGCTA
AGATCATGGACTCAACGTTGGTGATGGGCTCGCGCGCGCCCGAGGAGCTG
GCGAGGCGGGCCAACGAACTGGCCGGCAAGCTGGACGGCTTCCGTCGCTC
CTTCCAGTACGTGCAGGACTACATCAGCATCTACGGCCTCAAGCTGTGGC
AGGAGGAGTTCTCGCGCATCATCAACTTCAACGTGGAGCAGGAGTGCAAC
AGCTTCCTCCGCAAGACTGTCGACCCGCGCAGCCAGTACCAGTCGGACAC
GATCAAGATCCCCGTCTTCCCGCGCGTCGATCGCGACTCCATCAACTTCG
TGGGAAGGCTGGCGCGCGAGCTCATGCGCCTCACCAACTGCCGCAGCACC
ACCTACCTGGGCCAGAAGAGCGGCTGGTACTCGGCAGAGCGCGGCGTAGA
GCTCATCGGCATCCGCACCTTCACGCTGCTCGTCAACAGCGTGGGAGTCT
TCGGCGTGATGGGCCTGGACAAGCTCTTCATGCTTGCCATGGAGACGACG
CTGGTGGGCGTCGTCGAGGTGGACCCCAAGAAGCTGCTCGAGGACGGCAT
CCGCAAGGAGCTGGTCGACCACATCGCTAAGATCATGGACTCAACGTTGG
TGATGGGCTCGCGCGCGCCCGAGGAGCTGGCGAGGCGGGCCAACGAACTG
GCCGGCAAGCTGGACGGCTTCCGTCGCTCCTTCCAGTACGTGCAGGACTA
CATCAGCATCTACGGCCTCAAGCTGTGGCAGGAGGAGTTCTCGCGCATCA
TCAACTTCAACGTGGAGCAGGAGTGCAACAGCTTCCTCCGCAAGACTGTC
GACCCGCGCAGCCAGTACCAGTCGGACACGATCAAGATCCCCGTCTTCCC
GCGCGTCGATCGCGACTCCATCAACTTCGTGGGAAGGCTGGCGCGCGAGC
TCATGCGCCTCACCAACTGCCGCAGCACCACCTACCTGGGCCAGAAGAGC
GGCTGGTACTCGGCAGAGCGCGGCGTAGAGCTCATCGGCATCCGCACCTT
CACGCTGCTCGTCAACAGCGTGGGAGTCTTCGGCGTGATGGGCCTGGACA
AGCTCTTC
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