mRNA_M-pyrifera_M_contig8933.20707.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8933.20707.1
Unique NamemRNA_M-pyrifera_M_contig8933.20707.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig8933.20707.1 vs. uniprot
Match: D7G7G7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7G7_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 9.550e-81
Identity = 134/223 (60.09%), Postives = 163/223 (73.09%), Query Frame = 1 
Query:    1 TLLFMHLWKCAGSSLRHLLRDWAQLEEQSIVIVVRCTDVVTHGESVCLQNHQFIDEKIQGPRVRESDVVAGHFTWGFQNNVQQPYVMFTTLRNPLELFVSGQQYKHRKKTRVMSKAAGLVGDTMAAALEHHRGRLGAAGTPGNDEGGLVLPQGHGG-KVVGFIYRLVHPEVRIGC--GVMETKTLNEATEEAIKNLDTFWIVGVVEQYQGFMAVLQSMMDPLK 660
            TLLFMHLWKCAGSSLRHLLRDWA+ +EQ I IVVRCTDVV+    +CL++H  I+E+ Q P +R   VVAGHFTWGFQN+V+QPYVMFTTLRNPLELFVSGQQY +RK +R  + A  LV DT+  A++ H+ R           G +++P+G G  K VGFIYRLV P        G++  KTL+   +EA  NLDTFW+VGV+EQYQGFMAVLQ+MMDP K
Sbjct:   55 TLLFMHLWKCAGSSLRHLLRDWAEAKEQDIGIVVRCTDVVSKTGKICLKHHSLINERFQAPFIRLHQVVAGHFTWGFQNHVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHFAHAVSLVEDTILRAIKQHQLR-----------GDVMVPEGMGNTKSVGFIYRLVDPVQANSTQEGLVGGKTLSAGAQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNK 266
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BLAST of mRNA_M-pyrifera_M_contig8933.20707.1 vs. uniprot
Match: A0A6H5JGJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ5_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 2.630e-46
Identity = 89/218 (40.83%), Postives = 135/218 (61.93%), Query Frame = 1 
Query:    1 TLLFMHLWKCAGSSLRHLLRDWAQLEEQSIVIVVRCTDVVTHGESVCLQNHQFIDEKIQGPRVRESDVVAGHFTWGFQNNVQQPYVMFTTLRNPLELFVSGQQYKHRKKTRVMSKAAGLVGDTMAAALEHHRGRLGAAGTPGNDEGGLVLPQGHGGKVVGFIYRLVHPEVRIGCGVMETKTLNEATEEAIKNLDTFWIVGVVEQYQGFMAVLQSMMDP 654
            T++F+H++KCAGS+LR +L  WA+ E++   IV RC +  +    +CL + + +DE +Q   +    V+AGHF WGFQ ++++PY+M T LRNPLE++VS QQY H++KT+ + KA   V   M   L  + G   A G      GG   PQ    ++ GF++RLV     I    +  + L  A  +AI+NL+TFW+VG+VEQY GF+ VL+ ++DP
Sbjct:   40 TVMFLHVFKCAGSTLRRMLVAWAEAEDELGAIVHRC-NYTSEAREICLAHFKLVDEPVQLELLSRQKVLAGHFLWGFQRHLRRPYLMVTALRNPLEVYVSAQQYTHKRKTKTLEKAQAFVSKAMRKTLRQY-GDGPALGEEEMPFGGKS-PQ----QIGGFVFRLVG----INKKQLYGEKLEVAVTKAIENLETFWLVGLVEQYAGFVEVLELLLDP 246
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BLAST of mRNA_M-pyrifera_M_contig8933.20707.1 vs. uniprot
Match: A0A6H5JGQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ3_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 7.040e-42
Identity = 91/229 (39.74%), Postives = 131/229 (57.21%), Query Frame = 1 
Query:    1 TLLFMHLWKCAGSSLRHLLRDWAQLEEQSIVIVVRCTDVVTHGESVCLQNHQFIDEKIQGPRVRESDVVAGHFTWGFQNNVQQPYVMFTTLRNPLELFVSGQQYKHRKKTRVMSKAAG-----LVGDTMAAAL----EHHRGRLGAAGTPGND--EGGLVLPQGHGGKVVGFIYRLVHPEVRIGCGVMETKTLNEATEEAIKNLDTFWIVGVVEQYQGFMAVLQSMMDP 654
            T++F+H++KCAGS+LR +  DWA+ E  S  IV  C +V   G  +CL  H+ I E +Q   + +  ++AGHF WGFQ  V++P++M T+LRNPLE FVSG+Q+ H   T  + +A+       V   M  AL      H   LG   + G+    G    P     ++ GFI+RLV  E       +    L+ A +EA+KNL+ FW+VGVVEQY G  AVL+ ++DP
Sbjct:  153 TVMFLHVFKCAGSTLRQMFVDWAKAEGASGAIVTSCDEVQKEGV-ICLAKHELIKESVQMKMLLKQKILAGHFIWGFQRLVEKPFLMVTSLRNPLEAFVSGRQFLHPDMTETLEQASAAHAQAFVSYAMLNALGIDGPGHVAMLGERASLGHALLRGRRQSPD----QLGGFIFRLVGQE---NAKKLHGLALSRAADEAMKNLEAFWVVGVVEQYAGLQAVLKRLLDP 373
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BLAST of mRNA_M-pyrifera_M_contig8933.20707.1 vs. uniprot
Match: A0A6H5JAP0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAP0_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 2.220e-39
Identity = 90/237 (37.97%), Postives = 122/237 (51.48%), Query Frame = 1 
Query:    1 TLLFMHLWKCAGSSLRHLLRDWAQLEEQSIVIVVRCTDVVTHGESVCLQNHQFIDEKIQGPRVRESDVVAGHFTWG-------------------FQNNVQQPYVMFTTLRNPLELFVSGQQYKHRKKTRVMSKAAGLVGDTMAAALEHHRGRLGAAGTPGNDEGGLVLPQGHGGKVVGFIYRLVHPEVRIGCGVMETKTLNEATEEAIKNLDTFWIVGVVEQYQGFMAVLQSMMDP 654
            TL+F+H+WKC G++LR L+ DWA  E      V  C  +      VCL N++ I  + QG  +    V+AGHF WG                   FQ    +P+ + TTLRNPLELFVSG+QY +R  T  +SKA  +V   M  +LE          TP         P G       +++RLV      G  V+    + EAT E  +NL TFW+VGVVEQY GF+AVL++++DP
Sbjct:   62 TLMFLHVWKCGGTTLRRLMCDWANSEGLPCATVAGCGHLSLKERKVCLLNYKLIFPEQQGEFIARQKVLAGHFRWGESRVTSACHTVTRTLFASGFQVYAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLSKAVQVVERAMRKSLE----------TP-------TQPPG-------YLHRLV------GRSVVTNAEIREATVEGARNLKTFWLVGVVEQYGGFVAVLRALLDP 268
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BLAST of mRNA_M-pyrifera_M_contig8933.20707.1 vs. uniprot
Match: A0A6H5KGA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGA9_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 8.610e-38
Identity = 94/220 (42.73%), Postives = 113/220 (51.36%), Query Frame = 1 
Query:    1 TLLFMHLWKCAGSSLRHLLRDWAQLEEQSIVIVVRCTDVVTHGESVCLQNHQFIDEKIQGPRVRESDVVAGHFTWGFQNNVQQPYVMFTTLRNPLELFVSGQQYKHRKKTRVMSKAAGLVGDTMAAALEHHRGRLGAAGTPGNDEGGLVLPQGHGGKVVGFIYRLVHPEVRIGCGVMETKTLNEATEEAIKNLDTFWIVGVVEQYQGFMAVLQSMMDPLK 660
            TLLFMHLWKCAGSSLRHLLRDWA+ + Q I IVVRCTDVV+    +CL+ H  I+E+ Q P +R   VVAGHFTWG              L  P E   S + Y   + T           D + +  E               EGG+      GGK                       TL+   +EA+ NLDTFW+VGV+EQYQGFMAVLQ+MMDP K
Sbjct:  173 TLLFMHLWKCAGSSLRHLLRDWAEAKGQYIGIVVRCTDVVSKTGKICLKRHSLINERFQAPFIRLHQVVAGHFTWG--------------LHRPKEC--SEKWYSDMETTAF---------DQVVSTAE--------------PEGGV------GGK-----------------------TLSAGAQEAMDNLDTFWLVGVIEQYQGFMAVLQAMMDPNK 324
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BLAST of mRNA_M-pyrifera_M_contig8933.20707.1 vs. uniprot
Match: A0A6H5KCZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ6_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.120e-32
Identity = 81/223 (36.32%), Postives = 124/223 (55.61%), Query Frame = 1 
Query:    1 TLLFMHLWKCAGSSLRHLLRDWAQLEEQSIVIVVRC-TDVVTHGESVCLQNHQFIDEKIQGP-RVRESDVVAGHFTWGFQNNVQQPYVMFTTLRNPLELFVSGQQYKHRKKTRVMSKAAGLVGDTMAAALEHHRGRLGAAGTPGNDEGGLVLPQGHGGKVVGFIYRLVHPEVRIGCG---VMETKTLNEATEEAIKNLDTFWIVGVVEQYQGFMAVLQSMMDP 654
            T+LF+H++KCAG++LR +L  WA+LE  +  IV  C +   T+   +CL +   + + I+    V  S ++AGHF W F++ V  PY+M TTLRNPLELFVS QQ+ H+ +T+ +  +   VG +M       + RLG A     D   L            FI R +  E         +   + ++   + A+ +L+TF++VGVVEQYQGF+ VL+  +DP
Sbjct:  103 TILFLHVFKCAGTTLREVLTTWAKLEGLNGAIVEYCRSKTFTNVGRICLNSQNDLMDPIREKWLVAGSKLLAGHFLWDFRHYVTPPYLMVTTLRNPLELFVSSQQFMHKAETKTLDDSVAFVGQSM-------KSRLGWA-----DPTDLA-----------FIRRFLDSETANSYDPQVLYSDEEMSAMVQTAVDHLNTFYVVGVVEQYQGFIEVLKRTLDP 302
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BLAST of mRNA_M-pyrifera_M_contig8933.20707.1 vs. uniprot
Match: A0A6H5KPF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF0_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 3.410e-28
Identity = 79/230 (34.35%), Postives = 117/230 (50.87%), Query Frame = 1 
Query:    1 TLLFMHLWKCAGSSLRHLLRDWAQLEEQSIVIVVRCTDVVTH-------GESVCL--QNHQFIDEKIQGPRVRESDVVAGHFTWGFQNNVQQPYVMFTTLRNPLELFVSGQQYKHRKKTRVMSKAAGLVGDTMAAALEHHRGRLGAAGTPGNDEGGLVLPQGHGGKVVGFIYRLVHPEVRIGCGVMETKTLNEA---TEEAIKNLDTFWIVGVVEQYQGFMAVLQSMMDP 654
            T LF+H++KCAG+SLR +   +A+    +  ++  C+            G  +C+  ++H+  DE I    V  + V+AGHF W F+     PY+M TTLRNPLELFVS  Q+KHR +TR ++ A   V   M   L                  GL      G   +GFI   ++    +G       T NE      E++++L+TF +VGVVEQY+GF+ VL+  +DP
Sbjct:   91 TTLFLHVFKCAGTSLREVFMAFAKTNGWTGAVIAGCSKTQKEFQFHDPPGSVICVRHEDHRPKDENIGRWLVSGTKVLAGHFFWDFRLMAAPPYLMVTTLRNPLELFVSALQFKHRDETRTLAGATRFVTSQMRTIL------------------GL-----EGLGQLGFIRVFLNDTGAVGYNPRGVYTHNETWAMATESVEHLNTFLVVGVVEQYEGFIEVLKHTLDP 297
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BLAST of mRNA_M-pyrifera_M_contig8933.20707.1 vs. uniprot
Match: D8LHE4_ECTSI (Similar to heparin sulfate O-sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE4_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 9.420e-28
Identity = 75/211 (35.55%), Postives = 113/211 (53.55%), Query Frame = 1 
Query:   28 CAGSSLRHLLRDWAQLEEQSIVIVVRC-TDVVTHGESVCLQNHQFIDEKIQGP-RVRESDVVAGHFTWGFQNNVQQPYVMFTTLRNPLELFVSGQQYKHRKKTRVMSKAAGLVGDTMAAALEHHRGRLGAAGTPGNDEGGLVLPQGHGGKVVGFIYRLVHPEVRIGCGVMETKTLNEATEEAIKNLDTFWIVGVVEQYQGFMAVLQSMMDP 654
            CAG++LR +L  WA+LE  +  IV  C +   T+   +CL +   +   I+    V  S ++AGHF W F++ V  PY+M TTLRNPLELFVS QQ+ H+ +T+ +  +   VG +M       R RL  A     D   L   +          Y    P+V     +   + ++   + A+ +L+TF++VGVVEQYQGF+ VL+  +DP
Sbjct:    2 CAGTTLREVLTTWAKLEGWNGAIVEYCRSKTFTNAGRICLNSQNDLMNPIREKWLVAGSKLLAGHFLWDFRHYVTPPYLMVTTLRNPLELFVSSQQFMHKAETKTLDDSVAFVGQSM-------RSRLKWA-----DPTDLAFIRRFLDSKTANSY---DPQV-----MYSDEEMSAMVQTAVDHLNTFYVVGVVEQYQGFIEVLKRTLDP 192
[Close]
BLAST of mRNA_M-pyrifera_M_contig8933.20707.1 vs. uniprot
Match: D7FJ87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ87_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 3.570e-21
Identity = 65/181 (35.91%), Postives = 93/181 (51.38%), Query Frame = 1 
Query:  127 GESVCL--QNHQFIDEKIQGPRVRESDVVAGHFTWGFQNNVQQPYVMFTTLRNPLELFVSGQQYKHRKKTRVMSKAAGLVGDTMAAALEHHRGRLGAAGTPGNDEGGLVLPQGHGGKVVGFIYRLVHPEVRIGCGVMETKTLNEA---TEEAIKNLDTFWIVGVVEQYQGFMAVLQSMMDP 654
            G  +C+  ++H+  D+ I    V  + V+AGHF W F+     PY+M TTLRNPLELFVS  Q+KHR +TR ++ A   V   M   L                  GL      G   +GFI   ++    +G       T NE      E++++L+TF +VGVVEQY+GF+ VL+  +DP
Sbjct:   31 GSIICVRHEDHRPKDDNIGKWLVSGTKVLAGHFFWDFRLMAAPPYLMVTTLRNPLELFVSALQFKHRDETRTLAGATRFVTSQMRTIL------------------GL-----EGLGQLGFIRVFLNDTGAVGYNPRGVYTHNETWAMAAESVEHLNTFLVVGVVEQYEGFVEVLKHTLDP 188
[Close]
BLAST of mRNA_M-pyrifera_M_contig8933.20707.1 vs. uniprot
Match: D8LIP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIP4_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.500e-18
Identity = 63/183 (34.43%), Postives = 91/183 (49.73%), Query Frame = 1 
Query:  118 VTHGESVCLQNHQFI-DEKIQGPRVRESDVVAGHFTWGFQNNVQQPYVMFTTLRNPLELFVSGQQYKHRKKTRVMSKAAGLVGDTMAAALEHHRGRLGAAGTPGNDEGGLVLPQGHGGKVVGFIYRLVHPEVRIGCG--VMETKTLNEA-TEEAIKNLDTFWIVGVVEQYQGFMAVLQSMMDP 654
            V     +CL +   + D   Q   V  + V+AGHF W  +  V  P+++ T LR+PLELFVS +Q+KHR++T  +  AA  V   M       RGRLG    P +               +GF+ R +  +        ++ TK  + A    A ++L  FW+VGVVEQY GF+ VLQ  +DP
Sbjct:  105 VWESHVICLNDQNALRDSASQRWEVAGTRVLAGHFLWDLRQYVTPPHLLITMLRDPLELFVSAKQFKHREETASLEAAADFVASNM-------RGRLGWE-DPSD---------------IGFVRRFLGTDAANSYDPQLVYTKEQSSAMASTAAEHLSNFWVVGVVEQYAGFVNVLQHTLDP 264
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8933.20707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G7G7_ECTSI9.550e-8160.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGJ5_9PHAE2.630e-4640.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGQ3_9PHAE7.040e-4239.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAP0_9PHAE2.220e-3937.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KGA9_9PHAE8.610e-3842.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCZ6_9PHAE1.120e-3236.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPF0_9PHAE3.410e-2834.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHE4_ECTSI9.420e-2835.55Similar to heparin sulfate O-sulfotransferase n=1 ... [more]
D7FJ87_ECTSI3.570e-2135.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LIP4_ECTSI1.500e-1834.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8933contigM-pyrifera_M_contig8933:2879..11325 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score92.0
Seed ortholog evalue3.5e-16
Seed eggNOG ortholog2880.D8LIP4
Preferred nameTMEM256
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein of unknown function (DUF423)
EggNOG OGsCOG2363@1,KOG3472@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size660
Cds size648
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8933.20707.1prot_M-pyrifera_M_contig8933.20707.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8933 2891..11325 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816803.4906645-UTR-M-pyrifera_M_contig8933:2878..28901622816803.4906645-UTR-M-pyrifera_M_contig8933:2878..2890Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8933 2879..2890 +
1692278188.0010345-UTR-M-pyrifera_M_contig8933:2878..28901692278188.0010345-UTR-M-pyrifera_M_contig8933:2878..2890Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8933 2879..2890 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816803.5031404-CDS-M-pyrifera_M_contig8933:2890..30041622816803.5031404-CDS-M-pyrifera_M_contig8933:2890..3004Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8933 2891..3004 +
1692278188.0122037-CDS-M-pyrifera_M_contig8933:2890..30041692278188.0122037-CDS-M-pyrifera_M_contig8933:2890..3004Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8933 2891..3004 +
1622816803.5133374-CDS-M-pyrifera_M_contig8933:3728..38281622816803.5133374-CDS-M-pyrifera_M_contig8933:3728..3828Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8933 3729..3828 +
1692278188.021282-CDS-M-pyrifera_M_contig8933:3728..38281692278188.021282-CDS-M-pyrifera_M_contig8933:3728..3828Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8933 3729..3828 +
1622816803.5243325-CDS-M-pyrifera_M_contig8933:5267..53861622816803.5243325-CDS-M-pyrifera_M_contig8933:5267..5386Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8933 5268..5386 +
1692278188.0306559-CDS-M-pyrifera_M_contig8933:5267..53861692278188.0306559-CDS-M-pyrifera_M_contig8933:5267..5386Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8933 5268..5386 +
1622816803.536549-CDS-M-pyrifera_M_contig8933:8927..91071622816803.536549-CDS-M-pyrifera_M_contig8933:8927..9107Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8933 8928..9107 +
1692278188.040701-CDS-M-pyrifera_M_contig8933:8927..91071692278188.040701-CDS-M-pyrifera_M_contig8933:8927..9107Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8933 8928..9107 +
1622816803.5485501-CDS-M-pyrifera_M_contig8933:11190..113251622816803.5485501-CDS-M-pyrifera_M_contig8933:11190..11325Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8933 11191..11325 +
1692278188.052368-CDS-M-pyrifera_M_contig8933:11190..113251692278188.052368-CDS-M-pyrifera_M_contig8933:11190..11325Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8933 11191..11325 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8933.20707.1

>prot_M-pyrifera_M_contig8933.20707.1 ID=prot_M-pyrifera_M_contig8933.20707.1|Name=mRNA_M-pyrifera_M_contig8933.20707.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp
MHLWKCAGSSLRHLLRDWAQLEEQSIVIVVRCTDVVTHGESVCLQNHQFI
DEKIQGPRVRESDVVAGHFTWGFQNNVQQPYVMFTTLRNPLELFVSGQQY
KHRKKTRVMSKAAGLVGDTMAAALEHHRGRLGAAGTPGNDEGGLVLPQGH
GGKVVGFIYRLVHPEVRIGCGVMETKTLNEATEEAIKNLDTFWIVGVVEQ
YQGFMAVLQSMMDPLK
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mRNA from alignment at M-pyrifera_M_contig8933:2879..11325+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8933.20707.1 ID=mRNA_M-pyrifera_M_contig8933.20707.1|Name=mRNA_M-pyrifera_M_contig8933.20707.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8447bp|location=Sequence derived from alignment at M-pyrifera_M_contig8933:2879..11325+ (Macrocystis pyrifera P11B4 male)
ACCCTGTTGTTCATGCACTTGTGGAAGTGCGCGGGGTCTTCTCTGAGGCA
TCTCCTTAGAGATTGGGCACAGTTGGAAGAGCAGTCGATCGTGATCGTCG
TGAGGTGCACTGACGTGGTTACTCATGTAAGTCGGCGTTTCTACATGGTA
TGCTTTGTTCAAGGGGGTGCGGGAACGGGGAGTAGGGAGGGGGGGGTAAA
TAACGGGGAAGCAGGGAGGGGATGGGGGGTAGGCGGTCGGGGCGGGGGGG
GGGAGGGGCGAACAGGTTCGCCTTGTTGGTGAGTGATTAGCGAAGCCCGT
AGGACCATTTCGGATTTTTTTTTTTTGGGCGTTCCTGGCCGACACGTATT
TAGAGTTGAGCAGGCATTTTGTGAACTGAAATATGCAACTATTAATACGG
TAGGTAGGTACCGCGTGGTGCAAGCTGCTTTACTTGCGTGGGATGAAGAG
GGGTGGAGGGGGGGGAGCAGGGAACTGGGAATACCTAGAATTGCACACGA
ATATTTTAGAAAATTGTACAAAGTTAACGTGTTCATCGGATACCGACGAA
TAAATGATTTGGCGTCGTTCATGTCCATGCTCAGGCAGCAGCGAGGACGG
TGGCGGTGGGGGCTCGATGCCACGCTTACGGGTGTACGCTCGTACCGATA
TATGAATTCATTGCACCGCGTCTATCACAGGGTCGTCGTAATTCACTTCC
CACATCCTCCGCGCTCTACATGTAGTATACGTACGCAAACGGGGTGACTG
TGTTGAGCAACCCCCCCCCTTGCCCCCCCCCTCCCCTTTTTCGTCTCGTC
ACCCCTGCACCCTGCCCGATCACTTTCGGATGCGGCCTCCTCTCTTTCAG
GGTGAATCGGTGTGCCTGCAGAACCACCAGTTCATCGACGAGAAAATACA
GGGGCCGCGGGTTCGAGAGAGTGACGTCGTCGCGGGGCACTTCACATGGG
GTGAGAGTCACGCTTACCTTTTACCGGTTAGTGGGTATCGGTAGTGATGT
CCTTGTGTAAAACATCAATAACTGCTGTATCCAGGAGTGGTCCGTCTATA
GTTACGGATAAGTAGGGTCGGTTGCCTGATGCAGTGCCATTGTATCAAGT
ATCCACATCACTACATCATTAGAGCAAGCGCTGCTGTATACCTGGTATAG
GCATAGACAGACCTTGGCCAAACGGACTAATAATAGTCAACTACGCGTAC
TACATGTATCATGTATCACTCGGTGGCTATTAATGGCCACGTGCGGAAAG
TTGGTTTTCTGTTTATTCATTTCTCAAGTATAGACATATCCACTCCTTGA
ATTCTGCAGCTTCAGATTTCGTCTTCCTCTTATAGGGACTACTGTATTCC
CTGGATGAGGCCATACAAAACCAGTAGTTGTAGTACGCGCGATCGAAGTA
TCACCACTAGTATGACTACTGCACTATGAGTAGTACCTCACACAGCTTGA
AAAAATGACGAGGTTCTCGACGAAATCCTCCATCTCACAGCTGTTGTTTT
TCTATTTTATTAGTAAATTTATGAAAGAACTGATATCGAATATCACGTAC
CGATACTAGTGTAGTGTAGTACGTAGTAAAACACACCTGTTACGGGTACC
TGGTATTTTATATCGATACTCGTGTGTGTATCAATACCATTTTCAAAAGC
AACGTCGAAGTCAATATCAGAGTGAGTGATACCGGTATGCAGCAACAACA
GAGGGAAGCCAATGAAGGAAATACTGCAGTACGGTTATGGTGTACGGACC
TCGTGCCAACAGAGGTGTGCAGAAAGAGGGTCATCCCGTTTAGGACTGAC
TGCATTCCAGATGGTCGGACTAAACAGAAACTTAAAAGGGCGAAAGGGCG
GCAGTTAGAACCGGTCTACAAGCTGCCCCGTGCCATGCGCCTGCCCCCTG
CTGGAGCTCGTGTTCTATTTCCTGTGATTGCCGTCCGTTAGCTTTCTCGA
TTCGTTTGGTCTTGCGCCGCGGATGACGCCGCCGCCGCTGCCGCTGCAGC
TACCGCTGCTGTTTCTATTTCTGCTGGCGATGCTTCTATTGCTGCTGCTG
CTGTTGTTGATGCTGCTGCCGCTGGTACTGGTGCTTGTGCTGTACCATCT
ATTGGCTCTGCTATTGTTACCATCGCTCTTGCTGCTGCTACTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTCTCACTATTGCTGCTGCCGCTGCCT
TTGCTGCTGTTTGTATTGCTGTTGTTGATGATGCCTGATGTAGTTGCTGT
TGATGCTGCTACTGCTGCTGTTGCCATTGCTGCTGCTACTGCTGTCGGTT
TGATTCTCCCCACCGCTGCGTCTTCTAATGCTACTGCTGCTGCTACTACT
TGCTGCTGCTGCTACTACTGCTGCTGCACCTGGTGACAGGGTTTCAAAAC
AACGTTCAGCAGCCCTACGTGATGTTCACCACGCTCCGGAACCCGCTGGA
GCTGTTCGTGTCCGGGCAGCAGTACAAGCACCGTAAAAAAACGCGGGTGA
TGAGCAAGGTGAGGCTTCCCGCCTAGCAATCCCACAGCACCAGCTTGCCT
TAGTCATTGCGTTGCGTGGCATTGCGTGGTGTGCTCGGCAGGTCAGTCGA
AGCCTACAGAGACCACGACCAATGGGCAAGGTCAGGCTTCTCATGCAGCA
AGTCCACGGCACTAGCTTTGCCTTGTAGTTCCGTTGCTATAGTGTGTTGT
GGCTCGGCAATTATGTATAAATCGATCCAGAAAAGTTTTTTTCACTTGTC
GAGTTGGGCCTTGCCTTGCCGTGCCACCCACCTGTATGTATTCATGGCGA
CACTCCTCCGACCTAATGGGTTGGAGAGCCAATGGAGAGCCGTTGTGCAG
CCGGTGACGAAGGGCACGTTGAGTTGGTCGGTGTGACGCTAGCGATGCGT
GAGACTCGACCCAGAAAACGTGTTCGTATTTTAGCGTCGCATCCTGTCGG
CGGACCCAAGTCTAATTACATGGAACTCACCACAGCAAAGGTAAGGTTTG
GAGGGCCGTTGGCAAAAGACAGGTTTTGTTGCCCCGTGCAACTCTGGCGA
CGCGTAAGACTCGACCCAAGTTTGCCTTTCACTGTGCTTGCGTCGTACCG
TGTTGGTAGACAGACCTCTAACTGCATTAGCCGCACGTCAGCAAGGCTTG
GAGAGCCGTTGGGAATCCGTTAGAGACCCGTTGGAGACCCGTTCGCAAGG
TGCCACGTCGGGTTGGTCGGTGTGACCCAGCGACGCGTGAGACTCGACCC
GTTAGGTCGTTTTCATTGATTTTTGAGCCGCATCTTGTCGGTGGATCAAT
TGTTAGTTTGCGTTAACCTTTCGACCGCGAGGTTCGGAGAGACGTTGGGG
AGTCGTTGGCAACGGGCATGCTGAGTTGGTCCGTATATCCCATTCGACGT
ATCGGACTCGACACACAAGTTTCCGCACCTATTCAACAGCAGTAGTAATA
CCAACCTCGATGGATAGCGTTAACCTTTCGACAACGGGGTTTTGAGAGCC
GTTGGCCCGGGCTGCGTGGATTGGTTGTTATGTCGAATGGTCGGTACGCC
AATGTCGGCCTGTAACCGCAGAATGTATACGCCGGTAAACACGCTGCCTG
TTTATGCCACAAACCCTGCGAAGGTGACCGTGCGGACCTTGCTCTGCTGG
GGACCGTACCAGTGGTTGGAGGTGGGGGTGATCTTCGTGGTGGTGTCGAT
GGTGATCATAGTAGTGGTGTTAGGTTGTTGTGGAGGCGATGGTGGTCGTG
GTGGTATCAGATGGGGGTGTTGTTGGCGGTCGTCGGTGGGGGTTGTGGTG
GCAGGTGGTAGATGTGGTGCTCGACACAGGTTAGAACGGTCTTAGCCCTC
TCTGGAATTCTGAGGGAATATTATAGGGTTTCCCCGTATTTTTTACCAAA
CGTCGTGAAAGAACGTCGCGGAGAACGTCGTCTCAGTTTGTAAAATATCG
TCGTGAAGTTCGCCGTGACGTTTGAAGGACAGTTTGGCTGGCGAGTAGTC
TGCGAAAGTTATGGAGATCTCGCCGCTCGTGCCTTTTCGTGAACAACGAA
GGCTCGCTTTTTGAAATTGAACGCATGCACCGCAAAAAAGTAAAAACCCC
ACGCACGCACGCACCATTCAAGATAGGAGATAGGAGTCGTCCGATTCGTA
CGTAATCGTCTCGCCAAACTGAGGATTCGAAGAGGAATCACTGTCCGGCA
TACTCTCTTGGCGGTGTCTTGGTTAGAGGCTGGATGTCGACGAGTAGTTT
TGATTGTTGGAGGAGGAGGTAATGTGTTGTGTCGGGGAGTGGGGGTGCTG
GTCGCCGATAATGAACTGTCGTCGAATTGTAGCAAAAGACTTTACAACCG
AGGTTCTCTTTTTCCGGAGGACACTGATGACATGGAAACGGTAGTTATCC
CCGCGGGTGTGTGAAGATAAAAGTTGAGGTAAAATAGTAGTGCGTTGCGA
CCGTGCATGCCTGCGTGTAAATTAACATACGGCGGCCCAAAGTTTGTACA
GCAGACGTTGTGCGCAAGGGAGGGGGAAGGTTCACACGTCTGAGAGTTCG
TGGAATCCAATTTCCTACGGTATGCCGATTCGCGCATCCCTGGTGCTCTC
ATCACCTATTATTTTATAATAACTCATGAACCCGCAAGAACTTAAACTCC
CGGTTGTCAGGTGCTCTATCTATCTCATGACACGGTTAACACCTACTAAC
TAAACTGGCGCTACTGCCATTGTACACCCCTTCCATTCGTGGGTCCAATC
ACGTGTGTGTTGGTTACTGGATGCCTGAAGGTCGTACAGCAGCAGTTGCC
GCACGTACGAGTGCATACAGCAAACAGCAGTAGTACTTCCTACCTGGTGT
CATACCTGGTGTAAAACACTCGTATCTGGTCATTGCAGCAGTAGTATCTT
CAAAAATGCAAAATCACGTGGGCAGCTATCCTCCGTGCATGTAGCTTCGT
ACATCATACGAACGCCATATGTTCCGAATGACCCGCTACATACAACCCCA
AGCATATATATCCTGCTGCTGTACCGCCGCCTGCGTTATTCCCCGCCTGC
TTATCCTCGTCCTTGTGATCTGCCTCCTCCACCCCGCTCGAACCTCCAAC
CACAGCCTGCGACAGCAGCAGCTCCCCCAGCCCTCGCGCTCACAAATTCC
AACTCCGGTGAGAGTCCCAGCGAGCCAAGTTGAAAACTATCACCCAGACG
CACAGAAGAGCTGTTGCTCCCGGTCGCCTTCACTGGCCCAGCGCCACCCC
CCTCCACCCCCAGCCCGGCATGCTGCGGCTCTCCATACCCTTGGCGACGG
CCTAGGCTCTGCGGGGTGCGAGTGCGAAGGGAATGTCTTGCGCTCGCTGT
TGGTGTGGTTGCATGCCCCTTGCTGCGTGCACCCGAGGACATGTTTCCGT
CGACAAGAAACTCAACAGGCCATCAGCGCAGAGCTGTAGATGGGTCGCGC
CCAAACAGAAAGCAGTATCTCCCGCGGTGCCGGCCGACCCCACGTTGAAG
CCCTATTGTCGTCGTGATATACACTGCTGCTGTGGATTGCTTTCAGCGAC
CCAGATGAGGGATGCCAAGGTTGGGATATATATGGAGATGGGGATGGGCT
GGGTGCGGTCTGTTCGCAGCTGTTGATCCCCACGAAGAAAAAAAACAGGC
CGTAAAAGTACCTCTCGTGAGATTTTTTCGTGGTAAAATTCCTTGTTTTT
TTTGTATTTTTACTTCTAACTTTGCGGCGTAACCTCGAGATGTCTTTTTT
TGTCCCAGACGACGATCTTCACGACGTTCTTTTTGCACGGAGAAACCCTA
TATTGTCTTGAAACATTATGACTACTACGTTATTCTGCTACACGAAGCAC
CCTGGGCTGCGGGGTCACGGGATGGTCCATATAGTCTTCTGAACTGTGCC
ATTCTCATTCCGCCTCATCCCATCTCGTCTCACCCCGCCCCTTTCAGTCC
CATGTTATCCCACCCCACCCCGTTGCGCCGTCTCTTTCATCATTGTCACA
CCCGTTGGCGGATGTCTCTTGCACCTTCTCGCTGTATTTTGTTGTGCAGG
CGGCGGGCCTCGTGGGAGATACCATGGCGGCCGCGCTGGAGCACCATCGA
GGCCGCTTAGGCGCCGCGGGCACCCCTGGGAACGACGAGGGTGGCTTGGT
GCTGCCTCAAGGGCACGGGGGCAAGGTGGTCGGGTTCATCTACCGCTTGG
TACACCCGGAGGTACGAATAGGGTGTGGCGTGGCGTGTTGTGGTGTGGCG
CCATGTGATGTGTGTGGCAGTGTGTACGGCGACTACTCATACGTGGAATG
GCGTGGTATGGATGTCATGATATGGTACGGGACGTTATTTGATGGAAAAA
CTGGTGTTGTTTGGTGGTGTATAGTATATGATAACGCTTCGACGAAAGCC
CCGTAATTTCGGTCCGTCTCAAGACCCTGCTCGTTGTTCGCTGGTGGCGA
CTACCGACCGCACTCTGTAAACCACGTACCGCCATCACATCGATACGTCC
AAACAGGACAGGCAAGTGTGCTTGTGGGTAATATTTGCGGGAATGGAGGT
GGGAGAAATCGCCGAGAGATATACGCTGTAATTGGAAACCTCACTCGAAG
GCTCGCAGCAGTGAGGTCGTGCCGGTGCGGCCCCATCTCTGGATAAAGGT
TTTGTTTCGTTTTTTTGTTATGGTACATTCCCTCGAGGTCTACGTTTGTA
CATCAGGGTCCGCACCCACCGTATGTGCTGGAAGCCCGCAGGTCGTGAAC
ATGGTTCATGGTTCTTGGTAGGGAGTTGGGTTATGTTCGCCGCACCGCGA
TGCCCCCGCCCGCGCACGCAGCATATCGTGGCAGTATGGGTTAGGGTTTG
TAGAATTAGTAGTCGGCCGTTTTGGCGGCTCTCTCCGCCTTATCCGATTC
TTCTCGGGAACGTTAATCTTCTCTCACGCGCTTTGTATATGTCCTAGGGT
GAACGTCGCATTTTGGGTAGCATCACACCACAGGATGGCTGGAATCATGT
CGTTCTGTAACAAATCATTGACAGCACCATAGCATCAAATCATGCATATC
ACCACGTCAGCATGGCACTTCAACATCGCATTCATAGGACGGTCGGCCGT
TCTCAACGGCGCCCTCCCTGCGCGATTCACCTGTGTTGCATTGCCCACAA
TAAAAACTCGTTTTGGCCAAATGTACAATAAAATAAATGCCTGGAAGCAC
CTCTACTTCCGTTATTTTCGTCAATGATATTTGGTTATTCTGCTCTAGCT
CAAAACTTTTCCATTCATCCAATATTTGGCAAGGCAGATATGGGCTCCTT
GGTGCCCCGTGACGGTGGCAAAGCGACAGCAGTTTCTGCGCCCTGCTTCC
AGTCGGACCTCGTCGCTAAAGTTTGAAAATGGGCAAAAAATATGGTTCCA
GGCGTTTAAATTTGATTTTCTTGTAATGGAGTCAAGTATATTTTTTGCTG
CTGTAGAAAAATATGCTCGTATCATACTCGTACGTACGTACCAGTTTCCT
TTGCAATTTTTTAGTAACGTTTTTAGTAACGTTTTTTTAATATGATAGTA
ATAATGGGGTAAGCCCGGCAGCGCAGAAGCCTAGAACATGCTCCGTCGCT
CTGCCGCTGCTCTTCCCAAGGATTAGTCAAGGATACAGTAGCTGCTGTAT
TAGCAAGGCCAGCACGTACCACGTGTCTGCATAAGCATCAGGACAGAAAA
CGGAGATCTTTAGCGTGTTTCGACTGTCGGCACAAGCGAGAGCAGGATGG
CCGTTTTGTGCATGTTTTTGGTGATTTTTTAGGCACCATTCTCAGGTCGA
CCGTGGCAACTGGAGGTTCGATCCCTAATTTCGAAAGGCGGAAATGACAT
GACTGGCTGTATGCGAGCCCACACACGGAAATCTGGTCAATTTCGTCAAG
GTCTTCGAGTCGGACCTCGGCCGTGAAAATGGCCTAATCGAGCGGCACAA
TTGCCTCGACCGAAGCTGCCGCTTGCTTGAAGCTGCGATGAACCGAATTT
ATCCAAGCCCAGGACGGCCAAGCGCCAACCAGCCACTTAACAGGCTCTAT
CATGACTTGATTGAGTTCGTCTGAACGTCCTGTGCCATTTGGGGCCTTCA
GTGGGCAGCACGGTGACCGTGAAGAGTGCCTCAAAAGACCCTCTGTGGGG
CTGATCTCGGCCAAACCCCGGTTTCAATAATATTCGCATTTTTTGATTGC
ACCTAAAAAACCATTTTGTTGGCAATGCAACACAGGTGGATTCCCCTTGC
GTTCATCTCCTTTTTGCTTCACACCCCTTATCTGACGTCCTCCGTGCACT
TCCTATGGGCAGGTGATGGAAACCAAAACGCTCAACGAAGCGACCGAGGA
GGCGATAAAAAACCTCGACACCTTCTGGATAGTGGGGGTGGTGGAGCAGT
ACCAGGGATTTATGGCGGTGCTTCAGTCCATGATGGACCCCCTCAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8933:2879..11325+

>mRNA_M-pyrifera_M_contig8933.20707.1 ID=mRNA_M-pyrifera_M_contig8933.20707.1|Name=mRNA_M-pyrifera_M_contig8933.20707.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig8933:2879..11325+ (Macrocystis pyrifera P11B4 male)
ATGCACTTGTGGAAGTGCGCGGGGTCTTCTCTGAGGCATCTCCTTAGAGA
TTGGGCACAGTTGGAAGAGCAGTCGATCGTGATCGTCGTGAGGTGCACTG
ACGTGGTTACTCATATGCACTTGTGGAAGTGCGCGGGGTCTTCTCTGAGG
CATCTCCTTAGAGATTGGGCACAGTTGGAAGAGCAGTCGATCGTGATCGT
CGTGAGGTGCACTGACGTGGTTACTCATGGTGAATCGGTGTGCCTGCAGA
ACCACCAGTTCATCGACGAGAAAATACAGGGGCCGCGGGTTCGAGAGAGT
GACGTCGTCGCGGGGCACTTCACATGGGGGTGAATCGGTGTGCCTGCAGA
ACCACCAGTTCATCGACGAGAAAATACAGGGGCCGCGGGTTCGAGAGAGT
GACGTCGTCGCGGGGCACTTCACATGGGGGTTTCAAAACAACGTTCAGCA
GCCCTACGTGATGTTCACCACGCTCCGGAACCCGCTGGAGCTGTTCGTGT
CCGGGCAGCAGTACAAGCACCGTAAAAAAACGCGGGTGATGAGCAAGGGT
TTCAAAACAACGTTCAGCAGCCCTACGTGATGTTCACCACGCTCCGGAAC
CCGCTGGAGCTGTTCGTGTCCGGGCAGCAGTACAAGCACCGTAAAAAAAC
GCGGGTGATGAGCAAGGCGGCGGGCCTCGTGGGAGATACCATGGCGGCCG
CGCTGGAGCACCATCGAGGCCGCTTAGGCGCCGCGGGCACCCCTGGGAAC
GACGAGGGTGGCTTGGTGCTGCCTCAAGGGCACGGGGGCAAGGTGGTCGG
GTTCATCTACCGCTTGGTACACCCGGAGGTACGAATAGGGTGTGGCGCGG
CGGGCCTCGTGGGAGATACCATGGCGGCCGCGCTGGAGCACCATCGAGGC
CGCTTAGGCGCCGCGGGCACCCCTGGGAACGACGAGGGTGGCTTGGTGCT
GCCTCAAGGGCACGGGGGCAAGGTGGTCGGGTTCATCTACCGCTTGGTAC
ACCCGGAGGTACGAATAGGGTGTGGCGTGATGGAAACCAAAACGCTCAAC
GAAGCGACCGAGGAGGCGATAAAAAACCTCGACACCTTCTGGATAGTGGG
GGTGGTGGAGCAGTACCAGGGATTTATGGCGGTGCTTCAGTCCATGATGG
ACCCCCTCAAGGTGATGGAAACCAAAACGCTCAACGAAGCGACCGAGGAG
GCGATAAAAAACCTCGACACCTTCTGGATAGTGGGGGTGGTGGAGCAGTA
CCAGGGATTTATGGCGGTGCTTCAGTCCATGATGGACCCCCTCAAG
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