mRNA_M-pyrifera_M_contig89327.20704.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89327.20704.1
Unique NamemRNA_M-pyrifera_M_contig89327.20704.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89327.20704.1 vs. uniprot
Match: A0A2E5YHQ4_9DELT (Tyrosine--tRNA ligase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E5YHQ4_9DELT)

HSP 1 Score: 338 bits (867), Expect = 1.510e-112
Identity = 174/268 (64.93%), Postives = 202/268 (75.37%), Query Frame = 1
Query:    1 TEVRRNSEWFDAMDFGELLKLTARMTVARMLERDTFQQRVADNEPIGIHEFLYPLMQGWDSVMVEADVELGGTDQLFNLLVGRTLQEQEGQRPQVCMTLPLICGTDGRKMSKSYGNAVGLTDPPRDMFGQLMSLRDEEMEAWMKLLLRIDDAEREALLAGHPRTAKAALAHGITAFLHGEAAADDGRQAFDSQFRDKALPDDIEEHAWPVEDDEVPLIVVLNKLGLAASSSEARRLVTQGAVKLEGEPVKDPRARLKRGTELLLVQVG 804
            TEVRRNSEWFD MDF  +LKL ARMTVARM+ERDTFQ+R+ D+EP+GIHEFLYPLMQGWDSV V ADVELGGTDQLFNLLVGR LQEQEGQRPQ+C+T PLI GTDGRKMSKSYGNA+   D P ++FG+ MS+ DE ME W   L R+ + E   +LAGHPR AK  LA  +   LHG A AD   +AFD QFR K LPDDI E AWP E   +PL  +L +LGLAAS  EARRLV+QG V+L+GE   +P   ++   E LL+QVG
Sbjct:  118 TEVRRNSEWFDQMDFEGVLKLCARMTVARMIERDTFQKRIKDSEPVGIHEFLYPLMQGWDSVQVSADVELGGTDQLFNLLVGRQLQEQEGQRPQICVTTPLINGTDGRKMSKSYGNALLFEDSPSEVFGKTMSVEDEVMEVWYTQLTRVPEEEISEILAGHPRDAKVRLAKEMVELLHGSAEADQAAEAFDRQFRSKELPDDIPEVAWPGESG-LPLANLLRELGLAASGGEARRLVSQGGVRLDGEVATEPMQVVEPPQEELLIQVG 384          
BLAST of mRNA_M-pyrifera_M_contig89327.20704.1 vs. uniprot
Match: A0A7C8CTE5_9BACT (Tyrosine--tRNA ligase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8CTE5_9BACT)

HSP 1 Score: 338 bits (866), Expect = 2.600e-112
Identity = 169/268 (63.06%), Postives = 204/268 (76.12%), Query Frame = 1
Query:    1 TEVRRNSEWFDAMDFGELLKLTARMTVARMLERDTFQQRVADNEPIGIHEFLYPLMQGWDSVMVEADVELGGTDQLFNLLVGRTLQEQEGQRPQVCMTLPLICGTDGRKMSKSYGNAVGLTDPPRDMFGQLMSLRDEEMEAWMKLLLRIDDAEREALLAGHPRTAKAALAHGITAFLHGEAAADDGRQAFDSQFRDKALPDDIEEHAWPVEDDEVPLIVVLNKLGLAASSSEARRLVTQGAVKLEGEPVKDPRARLKRGTELLLVQVG 804
            TE+R+NSEWFD M+F ++L+L  RMTVARM+ERDTFQ+R+   EPIGIHEFLYPLMQGWDSV +  DVELGG DQLFNLLVGR LQEQ    PQVC T+PLI G DGRKMSKSYGN++GLT+ P +MFG++M+L D  MEAW  LL R+ DAE E LLAGHPR AKA LA  I  F H   AAD   +AFD QFRD+ LP++I+  AWPV+ DE+PL ++L +LGLA SSSEARRLV QG V+L+G+  +DP   + R     L+QVG
Sbjct:  122 TEIRQNSEWFDEMNFYDVLELAGRMTVARMIERDTFQKRMQAQEPIGIHEFLYPLMQGWDSVEIANDVELGGNDQLFNLLVGRQLQEQRDMCPQVCFTMPLINGLDGRKMSKSYGNSIGLTEAPGEMFGKIMALDDPSMEAWFTLLTRVADAEVETLLAGHPREAKARLAREIVTFFHSSDAADVASKAFDRQFRDRQLPENIQTEAWPVDGDELPLAILLKELGLAKSSSEARRLVQQGGVRLDGDICQDPMQAVLRPASEFLLQVG 389          
BLAST of mRNA_M-pyrifera_M_contig89327.20704.1 vs. uniprot
Match: A0A2D5W8S1_9BACT (Tyrosine--tRNA ligase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W8S1_9BACT)

HSP 1 Score: 331 bits (848), Expect = 1.390e-109
Identity = 170/269 (63.20%), Postives = 204/269 (75.84%), Query Frame = 1
Query:    1 TEVRRNSEWFDAMDFGELLKLTARMTVARMLERDTFQQRVADNEPIGIHEFLYPLMQGWDSVMVEADVELGGTDQLFNLLVGRTLQEQEGQRPQVCMTLPLICGTDGRKMSKSYGNAVGLTDPPRDMFGQLMSLRDEEMEAWMKLLLRIDDAEREALLAGHPRTAKAALAHGITAFLHGEAAADDGRQAFDSQFRDKALPDDIEEHAWPVEDD-EVPLIVVLNKLGLAASSSEARRLVTQGAVKLEGEPVKDPRARLKRGTELLLVQVG 804
            TEVRRNSEWFDAMDF  L++LT+RMTVARM+ERDTFQQR+  +EPIGIHEFLYPLMQGWDSVMV+AD+ELGGTDQLFNLLVGR LQ +EGQ PQVC+TLPLI G+DGRKMSKSYGNA+     P DMFG++M++ DE M AW  LL R+   E   LLAGHPR AKAALA  ITA  HG  AA    +AFD QF+ + +P+D+ EH WP E   ++ L  +L  +GLA ++SEARRLV QG V+L+GE   DP   +  G E  ++QVG
Sbjct:  123 TEVRRNSEWFDAMDFQGLVRLTSRMTVARMIERDTFQQRMEASEPIGIHEFLYPLMQGWDSVMVKADLELGGTDQLFNLLVGRDLQREEGQMPQVCLTLPLINGSDGRKMSKSYGNAIPFKAEPADMFGKVMAIEDEVMGAWFTLLTRLPQEEITTLLAGHPRRAKAALAADITARFHGAQAAQAASEAFDRQFQKREVPEDMPEHVWPDEGGADLQLATLLKSVGLAPTTSEARRLVKQGGVRLDGEVQSDPVRPISPGAEPRILQVG 391          
BLAST of mRNA_M-pyrifera_M_contig89327.20704.1 vs. uniprot
Match: A0A7C1X3E5_9BACT (Tyrosine--tRNA ligase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1X3E5_9BACT)

HSP 1 Score: 317 bits (813), Expect = 3.020e-104
Identity = 166/271 (61.25%), Postives = 201/271 (74.17%), Query Frame = 1
Query:    4 EVRRNSEWFDAMDFGELLKLTARMTVARMLERDTFQQRVADNEPIGIHEFLYPLMQGWDSVMVEADVELGGTDQLFNLLVGRTLQEQEGQRPQVCMTLPLICGTDGRKMSKSYGNAVGLTDPPRDMFGQLMSLRDEEMEAWMKLLLRIDDAEREALLAGHPRTAKAALAHGITAFLHGEAAADDGRQAFDSQFRDKALPDDIEEHA----WPVEDDEVPLIVVLNKLGLAASSSEARRLVTQGAVKLEGEPVKDPRARLKRGTELLLVQVG 804
            EVR NSEWFDAM F ++L+LT+RMTVA+ML+RD FQ+R+AD E IGIHEFLYPLMQGWDSV +  DVE GGTDQLFNLLVGR  QEQEGQ  Q+ +T PL+ G DGRKMSKSYGNA+ LTD P D+FG+ MS+ DE M  W +LL R+D+AE   LL GHPR AKA LA  I A LHG +AA D R AFD +F    +P+D+ E      WPV     PL V+L ++GLA++ SEARRL+ QGAVKL+G   +DP+A ++R  E LLVQVG
Sbjct:  126 EVRYNSEWFDAMGFEDVLRLTSRMTVAQMLQRDLFQKRMADAEAIGIHEFLYPLMQGWDSVELRCDVEFGGTDQLFNLLVGRDFQEQEGQPRQIVVTSPLLNGLDGRKMSKSYGNAILLTDSPEDVFGKTMSISDEAMALWFELLTRLDEAEVRELLQGHPREAKARLAEEICALLHGRSAATDARAAFDRRFSKGEIPEDVPERTYGGEWPV-----PLSVLLREVGLASTGSEARRLIQQGAVKLDGMVERDPKASVERPAEPLLVQVG 391          
BLAST of mRNA_M-pyrifera_M_contig89327.20704.1 vs. uniprot
Match: A0A2D5AVN0_9BACT (Tyrosine--tRNA ligase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AVN0_9BACT)

HSP 1 Score: 316 bits (809), Expect = 1.140e-103
Identity = 164/272 (60.29%), Postives = 202/272 (74.26%), Query Frame = 1
Query:    1 TEVRRNSEWFDAMDFGELLKLTARMTVARMLERDTFQQRVADNEPIGIHEFLYPLMQGWDSVMVEADVELGGTDQLFNLLVGRTLQEQEGQRPQVCMTLPLICGTDGRKMSKSYGNAVGLTDPPRDMFGQLMSLRDEEMEAWMKLLLRIDDAEREALLAGHPRTAKAALAHGITAFLHGEAAADDGRQAFDSQFRDKALPDDIEEHA----WPVEDDEVPLIVVLNKLGLAASSSEARRLVTQGAVKLEGEPVKDPRARLKRGTELLLVQVG 804
            TEVR N+EWFD M FG++L LTARMTVA+M++RDTFQ+R+   EPIGIHEFLYPLMQGWDSV ++ADVELGGTDQLFNLLVGR LQEQ GQ PQ+ +T PLI GTDGRKMSKSYGNA+GLTD   DMFG+ MS+ DE+M  W +LL  ++  E   +L+GHPR AKA LA  + ++L+GE+ A + R  FD +F ++ LP DI EH     WP E   VPL V+L  +GL  SSSEARRLV QG VK+ GE V++P   +    + LL+QVG
Sbjct:  118 TEVRYNTEWFDKMSFGDVLNLTARMTVAQMIQRDTFQKRLGACEPIGIHEFLYPLMQGWDSVELKADVELGGTDQLFNLLVGRQLQEQVGQEPQIVITTPLINGTDGRKMSKSYGNAIGLTDLSDDMFGKTMSMPDEDMAEWFELLTSLESDEVTKILSGHPRAAKARLAQEVVSWLYGESVAVEARAEFDRRFVNRELPSDIPEHIYAADWPAEG--VPLAVLLRDVGLVKSSSEARRLVGQGGVKVNGEAVREPMTAMSPPEDGLLLQVG 387          
BLAST of mRNA_M-pyrifera_M_contig89327.20704.1 vs. uniprot
Match: A0A518D0F1_9BACT (Tyrosine--tRNA ligase n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D0F1_9BACT)

HSP 1 Score: 316 bits (809), Expect = 1.470e-103
Identity = 163/270 (60.37%), Postives = 198/270 (73.33%), Query Frame = 1
Query:    1 TEVRRNSEWFDAMDFGELLKLTARMTVARMLERDTFQQRVADNEPIGIHEFLYPLMQGWDSVMVEADVELGGTDQLFNLLVGRTLQEQEGQRPQVCMTLPLICGTDGRKMSKSYGNAVGLTDPPRDMFGQLMSLRDEEMEAWMKLLLRIDDAEREALLAGHPRTAKAALAHGITAFLHGEAAADDGRQAFDSQFRDKALPDDIEEHAWPVED--DEVPLIVVLNKLGLAASSSEARRLVTQGAVKLEGEPVKDPRARLKRGTELLLVQVG 804
            TEVRRNSEWFD   F +LL+L+ RMTVARMLERDTF+ R+   EPIGIHEFLYPL+QGWDSV ++ADVE GGTDQLFNLL GR  QEQ+GQ PQ+C+T PLI G+DGRKMSKSYGNA+G+T    DMFG +MS  D+ M    + L R+ D E  ALLAGHPR AK ALA  +TA  HG+ AA + R+AF  QF  K LPDDI E  +P     + +PL V+L +L L  SSSEARR + QG V+++GEP  DPRA +   +E+LL+QVG
Sbjct:  128 TEVRRNSEWFDRFGFADLLELSGRMTVARMLERDTFETRMKAGEPIGIHEFLYPLLQGWDSVEIQADVEFGGTDQLFNLLAGRQFQEQQGQMPQICITTPLINGSDGRKMSKSYGNAIGITATANDMFGGVMSFPDDAMPMLFQHLTRLPDDEVAALLAGHPRDAKQALAQAVTAQFHGDEAAGEAREAFVRQFAKKELPDDIPEIPFPASAGAEGLPLTVLLRELALVTSSSEARRAIEQGGVRIDGEPCTDPRAVIAPPSEVLLLQVG 397          
BLAST of mRNA_M-pyrifera_M_contig89327.20704.1 vs. uniprot
Match: A0A523P6D0_9BACT (Tyrosine--tRNA ligase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523P6D0_9BACT)

HSP 1 Score: 307 bits (786), Expect = 3.900e-100
Identity = 161/269 (59.85%), Postives = 190/269 (70.63%), Query Frame = 1
Query:    1 TEVRRNSEWFDAMDFGELLKLTARMTVARMLERDTFQQRVADNEPIGIHEFLYPLMQGWDSVMVEADVELGGTDQLFNLLVGRTLQEQEGQRPQVCMTLPLICGTDGRKMSKSYGNAVGLTDPPRDMFGQLMSLRDEEMEAWMKLLLRIDDAEREALLAGHPRTAKAALAHGITAFLHGEAAADDGRQAFDSQFRDKALPDDIEEHAWP-VEDDEVPLIVVLNKLGLAASSSEARRLVTQGAVKLEGEPVKDPRARLKRGTELLLVQVG 804
            TE+RRNSEWF+AM F ++L L ARMTVA+M+ERDTFQ+R+ +NEPIGIHEFLYPLMQ WDSV V  D ELGGTDQLFNLLVGR LQEQEGQ PQVC+T PLI G DGRKMSKSYGNA+ LTD  R MF  +M L D  M  W   L R+ D E   LLAGHPR AKA LA  +T+F H   AA   R AFD + RD+ LP +I E  WP    D +PL  +L  +GL +++SEARR + QG V+L+G  V+DP   +      LLVQVG
Sbjct:  126 TEIRRNSEWFNAMTFEDVLLLLARMTVAQMIERDTFQKRMQENEPIGIHEFLYPLMQAWDSVQVRCDAELGGTDQLFNLLVGRKLQEQEGQAPQVCLTTPLINGLDGRKMSKSYGNAITLTDGARTMFFAVMRLDDASMGTWFTQLTRLPDDEVRTLLAGHPREAKARLAEELTSFFHDREAARAARAAFDREVRDRQLPAEIPERPWPGAPGDTLPLANLLKDIGLTSTTSEARRTIQQGGVRLDGTVVRDPVQLIAAPVAPLLVQVG 394          
BLAST of mRNA_M-pyrifera_M_contig89327.20704.1 vs. uniprot
Match: A0A521K8T0_9BACT (Tyrosine--tRNA ligase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521K8T0_9BACT)

HSP 1 Score: 306 bits (784), Expect = 8.580e-100
Identity = 167/272 (61.40%), Postives = 187/272 (68.75%), Query Frame = 1
Query:    1 TEVRRNSEWFDAMDFGELLKLTARMTVARMLERDTFQQRVADNEPIGIHEFLYPLMQGWDSVMVEADVELGGTDQLFNLLVGRTLQEQEGQRPQVCMTLPLICGTDGRKMSKSYGNAVGLTDPPRDMFGQLMSLRDEEMEAWMKLLLRIDDAEREALLAGHPRTAKAALAHGITAFLHGEAAADDGRQAFDSQFRDKALPDDIEE----HAWPVEDDEVPLIVVLNKLGLAASSSEARRLVTQGAVKLEGEPVKDPRARLKRGTELLLVQVG 804
            TEVRRNSEWFD M F E+L+L ARMTVARMLERD FQ+R+ADNEPIG+HEFLYPLMQGWDSVM+  DVE GGTDQLFNL  GR LQEQE Q PQ+ +T PLI G DGRKMSKSYGNAV LTDP R+M           M  W +LL R+D AE  ALLAGHPR AKA LA  IT   HG+A A     AFD QF    LP DI E      WP   D VPL  +L  LGL  SSS+ARR + QG VKL+G  VKD   R+   ++ LLVQ+G
Sbjct:  129 TEVRRNSEWFDRMRFEEVLRLCARMTVARMLERDMFQKRIADNEPIGVHEFLYPLMQGWDSVMIRCDVEFGGTDQLFNLHAGRLLQEQESQVPQILVTTPLINGLDGRKMSKSYGNAVALTDPAREMXXXXXXXXXXXMPTWFELLTRLDSAEIAALLAGHPRAAKARLAREITTTFHGDAEAAAAADAFDRQFAKGELPADIPELRYGKDWPA--DGVPLASLLRDLGLEKSSSDARRSIEQGGVKLDGTVVKDTNHRVLAPSQPLLVQIG 398          
BLAST of mRNA_M-pyrifera_M_contig89327.20704.1 vs. uniprot
Match: A0A518BKE9_9BACT (Tyrosine--tRNA ligase n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BKE9_9BACT)

HSP 1 Score: 303 bits (777), Expect = 7.420e-99
Identity = 160/270 (59.26%), Postives = 192/270 (71.11%), Query Frame = 1
Query:    1 TEVRRNSEWFDAMDFGELLKLTARMTVARMLERDTFQQRVADNEPIGIHEFLYPLMQGWDSVMVEADVELGGTDQLFNLLVGRTLQEQEGQRPQVCMTLPLICGTDGRKMSKSYGNAVGLTDPPRDMFGQLMSLRDEEMEAWMKLLLRIDDAEREALLAGHPRTAKAALAHGITAFLHGEAAADDGRQAFDSQFRDKALPDDIEEHAWPVE--DDEVPLIVVLNKLGLAASSSEARRLVTQGAVKLEGEPVKDPRARLKRGTELLLVQVG 804
            TEV RNS+WFD +DFG LL L  R TVARMLERDTF QR+   E +G+HE LYPL+QGWDSV + ADVELGGTDQLFNLL GRTLQEQEGQ PQVC T PLI G+DGRKMSKSYGNA+ +T+ P++MFG++M + DE M  W +LL     A+ EALLAGHP  AK  LA  I  + H         +AF +QFRDK LPDDI +  +  E   D +PL V+L  +GLA SSS+ARRL+ QGAV+L+GE V DP+  L      LL+QVG
Sbjct:  118 TEVHRNSDWFDKLDFGGLLALCGRTTVARMLERDTFDQRMKAGEAVGMHELLYPLLQGWDSVEIRADVELGGTDQLFNLLFGRTLQEQEGQSPQVCFTTPLINGSDGRKMSKSYGNAIAVTEEPKEMFGKIMRIPDEVMGQWFELLTDASPAQIEALLAGHPNEAKHELARRIVGYFHSPQIGQRESEAFIAQFRDKQLPDDIPDVVFDGEWSADGLPLPVLLRGVGLAQSSSDARRLIEQGAVRLDGEVVSDPKHLLVPPAAPLLIQVG 387          
BLAST of mRNA_M-pyrifera_M_contig89327.20704.1 vs. uniprot
Match: A0A2E6DAP2_9BACT (Tyrosine--tRNA ligase n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E6DAP2_9BACT)

HSP 1 Score: 301 bits (771), Expect = 7.670e-98
Identity = 161/269 (59.85%), Postives = 193/269 (71.75%), Query Frame = 1
Query:    1 TEVRRNSEWFDAMDFGELLKLTARMTVARMLERDTFQQRVADNEPIGIHEFLYPLMQGWDSVMVEADVELGGTDQLFNLLVGRTLQEQEGQRPQVCMTLPLICGTDGRKMSKSYGNAVGLTDPPRDMFGQLMSLRDEEMEAWMKLLLRIDDAEREALLAGHPRTAKAALAHGITAFLHGEAAADDGRQAFDSQFRDKALPDDIEEHAWPVE-DDEVPLIVVLNKLGLAASSSEARRLVTQGAVKLEGEPVKDPRARLKRGTELLLVQVG 804
            TEVRRNSEWFD M F +LL+LT RMTV++MLERD F++R+  +EPIGI+EFLYPLMQGWDSV ++ DVELGGTDQLFNLLVGR LQEQ+GQR Q   T PLI G DGRKMSKSYGNAVGL D  RDM   +M L D  ME W   L R+   E   LLAGHPR AKA LA  IT+F H    A+    AFD + RDKALP+D+ EHAW  E  + + L  ++  LGLA+S+SEARRL+ QGAV+L+G+   DP + L      +L+QVG
Sbjct:  128 TEVRRNSEWFDGMGFEDLLQLTTRMTVSQMLERDLFRRRLEQSEPIGINEFLYPLMQGWDSVEIDCDVELGGTDQLFNLLVGRRLQEQKGQRAQCVRTHPLIDGLDGRKMSKSYGNAVGLMDSARDMTFGVMRLDDPLMETWFTHLTRVPAEEVARLLAGHPREAKARLAFEITSFFHSAEEAEAAAGAFDREVRDKALPEDLPEHAWSAEWGESLALPNLIANLGLASSTSEARRLIQQGAVRLDGDVASDPTSSLAEPGSAVLLQVG 396          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89327.20704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E5YHQ4_9DELT1.510e-11264.93Tyrosine--tRNA ligase n=1 Tax=Deltaproteobacteria ... [more]
A0A7C8CTE5_9BACT2.600e-11263.06Tyrosine--tRNA ligase n=1 Tax=Planctomycetes bacte... [more]
A0A2D5W8S1_9BACT1.390e-10963.20Tyrosine--tRNA ligase n=1 Tax=Planctomycetes bacte... [more]
A0A7C1X3E5_9BACT3.020e-10461.25Tyrosine--tRNA ligase n=1 Tax=Planctomycetes bacte... [more]
A0A2D5AVN0_9BACT1.140e-10360.29Tyrosine--tRNA ligase n=1 Tax=Planctomycetes bacte... [more]
A0A518D0F1_9BACT1.470e-10360.37Tyrosine--tRNA ligase n=1 Tax=Planctomycetes bacte... [more]
A0A523P6D0_9BACT3.900e-10059.85Tyrosine--tRNA ligase n=1 Tax=Planctomycetes bacte... [more]
A0A521K8T0_9BACT8.580e-10061.40Tyrosine--tRNA ligase n=1 Tax=Planctomycetes bacte... [more]
A0A518BKE9_9BACT7.420e-9959.26Tyrosine--tRNA ligase n=1 Tax=Planctomycetes bacte... [more]
A0A2E6DAP2_9BACT7.670e-9859.85Tyrosine--tRNA ligase n=2 Tax=Planctomycetes bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89327contigM-pyrifera_M_contig89327:2..805 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score255.4
Seed ortholog evalue3e-65
Seed eggNOG ortholog688269.Theth_1868
Preferred nametyrS
KEGG rclassRC00055,RC00523
KEGG koko:K01866
KEGG ReactionR02918
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
EggNOG OGs2GCKH@200918,COG0162@1,COG0162@2
EC6.1.1.1
COG Functional cat.J
BiGG ReactioniJN746.PP_0436,iLJ478.TM0478
Best tax levelThermotogae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029
Exons1
Model size804
Cds size804
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816803.3783736-CDS-M-pyrifera_M_contig89327:1..8051622816803.3783736-CDS-M-pyrifera_M_contig89327:1..805Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89327 2..805 +
1692278187.946223-CDS-M-pyrifera_M_contig89327:1..8051692278187.946223-CDS-M-pyrifera_M_contig89327:1..805Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89327 2..805 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89327.20704.1prot_M-pyrifera_M_contig89327.20704.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89327 2..805 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89327.20704.1

>prot_M-pyrifera_M_contig89327.20704.1 ID=prot_M-pyrifera_M_contig89327.20704.1|Name=mRNA_M-pyrifera_M_contig89327.20704.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=268bp
TEVRRNSEWFDAMDFGELLKLTARMTVARMLERDTFQQRVADNEPIGIHE
FLYPLMQGWDSVMVEADVELGGTDQLFNLLVGRTLQEQEGQRPQVCMTLP
LICGTDGRKMSKSYGNAVGLTDPPRDMFGQLMSLRDEEMEAWMKLLLRID
DAEREALLAGHPRTAKAALAHGITAFLHGEAAADDGRQAFDSQFRDKALP
DDIEEHAWPVEDDEVPLIVVLNKLGLAASSSEARRLVTQGAVKLEGEPVK
DPRARLKRGTELLLVQVG
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mRNA from alignment at M-pyrifera_M_contig89327:2..805+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89327.20704.1 ID=mRNA_M-pyrifera_M_contig89327.20704.1|Name=mRNA_M-pyrifera_M_contig89327.20704.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=804bp|location=Sequence derived from alignment at M-pyrifera_M_contig89327:2..805+ (Macrocystis pyrifera P11B4 male)
ACCGAGGTGCGCCGCAACTCGGAGTGGTTCGACGCGATGGATTTTGGCGA GCTCCTGAAGCTCACCGCGCGCATGACCGTCGCGCGCATGCTCGAGCGCG ACACCTTTCAACAGCGCGTCGCCGACAACGAGCCGATCGGCATCCACGAG TTCCTGTACCCGTTGATGCAGGGCTGGGACTCGGTGATGGTCGAGGCCGA CGTGGAGCTCGGCGGCACGGACCAGCTCTTCAACCTGCTCGTCGGCCGCA CGCTCCAGGAGCAGGAGGGCCAGCGGCCCCAGGTGTGCATGACGCTGCCG CTGATCTGCGGCACCGACGGGCGCAAGATGTCGAAGAGCTACGGCAATGC GGTCGGCCTGACCGACCCGCCGCGCGACATGTTCGGCCAGCTGATGAGCC TGCGCGACGAGGAGATGGAGGCGTGGATGAAGCTGCTGCTGCGCATCGAC GACGCCGAGCGCGAGGCGCTGCTCGCCGGCCACCCGCGCACTGCCAAGGC GGCCCTGGCCCACGGCATCACCGCGTTCCTGCACGGCGAGGCGGCGGCCG ACGACGGACGGCAGGCCTTCGACAGCCAATTCCGCGACAAGGCCCTGCCC GACGACATCGAGGAGCACGCGTGGCCGGTGGAGGACGACGAGGTCCCGCT GATCGTGGTGCTCAACAAGCTCGGGCTCGCGGCGTCGAGCTCCGAGGCGC GCCGGCTGGTGACCCAGGGCGCGGTCAAGCTGGAGGGCGAGCCGGTCAAG GACCCCCGCGCACGACTGAAGCGCGGCACGGAGCTGCTCCTGGTGCAGGT CGGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89327:2..805+

>mRNA_M-pyrifera_M_contig89327.20704.1 ID=mRNA_M-pyrifera_M_contig89327.20704.1|Name=mRNA_M-pyrifera_M_contig89327.20704.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1608bp|location=Sequence derived from alignment at M-pyrifera_M_contig89327:2..805+ (Macrocystis pyrifera P11B4 male)
ACCGAGGTGCGCCGCAACTCGGAGTGGTTCGACGCGATGGATTTTGGCGA
GCTCCTGAAGCTCACCGCGCGCATGACCGTCGCGCGCATGCTCGAGCGCG
ACACCTTTCAACAGCGCGTCGCCGACAACGAGCCGATCGGCATCCACGAG
TTCCTGTACCCGTTGATGCAGGGCTGGGACTCGGTGATGGTCGAGGCCGA
CGTGGAGCTCGGCGGCACGGACCAGCTCTTCAACCTGCTCGTCGGCCGCA
CGCTCCAGGAGCAGGAGGGCCAGCGGCCCCAGGTGTGCATGACGCTGCCG
CTGATCTGCGGCACCGACGGGCGCAAGATGTCGAAGAGCTACGGCAATGC
GGTCGGCCTGACCGACCCGCCGCGCGACATGTTCGGCCAGCTGATGAGCC
TGCGCGACGAGGAGATGGAGGCGTGGATGAAGCTGCTGCTGCGCATCGAC
GACGCCGAGCGCGAGGCGCTGCTCGCCGGCCACCCGCGCACTGCCAAGGC
GGCCCTGGCCCACGGCATCACCGCGTTCCTGCACGGCGAGGCGGCGGCCG
ACGACGGACGGCAGGCCTTCGACAGCCAATTCCGCGACAAGGCCCTGCCC
GACGACATCGAGGAGCACGCGTGGCCGGTGGAGGACGACGAGGTCCCGCT
GATCGTGGTGCTCAACAAGCTCGGGCTCGCGGCGTCGAGCTCCGAGGCGC
GCCGGCTGGTGACCCAGGGCGCGGTCAAGCTGGAGGGCGAGCCGGTCAAG
GACCCCCGCGCACGACTGAAGCGCGGCACGGAGCTGCTCCTGGTGCAGGT
CGGCACCGAGGTGCGCCGCAACTCGGAGTGGTTCGACGCGATGGATTTTG
GCGAGCTCCTGAAGCTCACCGCGCGCATGACCGTCGCGCGCATGCTCGAG
CGCGACACCTTTCAACAGCGCGTCGCCGACAACGAGCCGATCGGCATCCA
CGAGTTCCTGTACCCGTTGATGCAGGGCTGGGACTCGGTGATGGTCGAGG
CCGACGTGGAGCTCGGCGGCACGGACCAGCTCTTCAACCTGCTCGTCGGC
CGCACGCTCCAGGAGCAGGAGGGCCAGCGGCCCCAGGTGTGCATGACGCT
GCCGCTGATCTGCGGCACCGACGGGCGCAAGATGTCGAAGAGCTACGGCA
ATGCGGTCGGCCTGACCGACCCGCCGCGCGACATGTTCGGCCAGCTGATG
AGCCTGCGCGACGAGGAGATGGAGGCGTGGATGAAGCTGCTGCTGCGCAT
CGACGACGCCGAGCGCGAGGCGCTGCTCGCCGGCCACCCGCGCACTGCCA
AGGCGGCCCTGGCCCACGGCATCACCGCGTTCCTGCACGGCGAGGCGGCG
GCCGACGACGGACGGCAGGCCTTCGACAGCCAATTCCGCGACAAGGCCCT
GCCCGACGACATCGAGGAGCACGCGTGGCCGGTGGAGGACGACGAGGTCC
CGCTGATCGTGGTGCTCAACAAGCTCGGGCTCGCGGCGTCGAGCTCCGAG
GCGCGCCGGCTGGTGACCCAGGGCGCGGTCAAGCTGGAGGGCGAGCCGGT
CAAGGACCCCCGCGCACGACTGAAGCGCGGCACGGAGCTGCTCCTGGTGC
AGGTCGGC
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