mRNA_M-pyrifera_M_contig89277.20694.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89277.20694.1 vs. uniprot
Match: A0A2D9CI65_9BACT (Ribonuclease R n=4 Tax=Phycisphaerae TaxID=666505 RepID=A0A2D9CI65_9BACT) HSP 1 Score: 412 bits (1059), Expect = 6.560e-136 Identity = 203/269 (75.46%), Postives = 230/269 (85.50%), Query Frame = 1 Query: 1 VNLIFDDNGKVIDAEPEDDAYTHTLIEMFMVEANESLASLFEMLRVPVLRRIHPEPTPGDADVLRKTAMVAGFRIPKSPTREELQGLLDATAGTGASRAVHNAVLRTLTKASYSPQLIGHYALASKAYSHFTSPIRRYPDLTLHRAMFAYLKKTSNGENRPKSDEAWIKLGKELNEHPYCPHEQELFEIGTQCSNTEVNAAGAERSLRQFLILQLMAEHIGESFDGFITGVTPKGIYVQIAKYLADGMVKKHDLPGDVTRSKKQPKWRI 807 V L+FD+NGKV+DA+ EDDA+THTLIEMFMVEANE+ ASLFE L VPVLRR HPEPTPGD D LRKTA VAGF+IP+SPTREELQ LLDATAGT ++RAVH AVLRT+TKA YSP LIGHYALAS AYSHFTSPIRRYPDLTLHRA++AYLK+T+NGENRP SDEAW +LG++L + YCP + L EIG CS TE NA GAER LRQFL+LQLM +HIGE F+GFITGV+PKG+YVQI KYLADGMV K DL GD TRSK+ P WR+ Sbjct: 448 VELVFDENGKVVDAQKEDDAFTHTLIEMFMVEANEATASLFEKLEVPVLRRTHPEPTPGDVDDLRKTATVAGFKIPQSPTREELQTLLDATAGTTSARAVHMAVLRTMTKAVYSPALIGHYALASHAYSHFTSPIRRYPDLTLHRAIWAYLKRTNNGENRPSSDEAWKRLGRDLRDDDYCPDKSILAEIGAHCSGTEQNATGAERELRQFLVLQLMEQHIGEEFEGFITGVSPKGVYVQIEKYLADGMVAKKDLVGDTTRSKRPPTWRL 716
BLAST of mRNA_M-pyrifera_M_contig89277.20694.1 vs. uniprot
Match: A0A3M2D2C3_9BACT (Ribonuclease R n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2D2C3_9BACT) HSP 1 Score: 408 bits (1049), Expect = 1.590e-134 Identity = 199/269 (73.98%), Postives = 230/269 (85.50%), Query Frame = 1 Query: 1 VNLIFDDNGKVIDAEPEDDAYTHTLIEMFMVEANESLASLFEMLRVPVLRRIHPEPTPGDADVLRKTAMVAGFRIPKSPTREELQGLLDATAGTGASRAVHNAVLRTLTKASYSPQLIGHYALASKAYSHFTSPIRRYPDLTLHRAMFAYLKKTSNGENRPKSDEAWIKLGKELNEHPYCPHEQELFEIGTQCSNTEVNAAGAERSLRQFLILQLMAEHIGESFDGFITGVTPKGIYVQIAKYLADGMVKKHDLPGDVTRSKKQPKWRI 807 V LIFD+NGKVIDAEPEDDA+THTLIEMFMVEANE++A+LFE L VPV+RRIHPEPTP D D LR+ A VAG++IPKSP R ELQ LLDATAGT A+RAVH AVLRTLTKA+YSP LIGHYALAS AYSHFTSPIRRYPDLT+HR++ AYL++T NG NRP+ D+A + LG+EL E CPH+QEL EIG CSNTEVNA AER LRQFL+LQLMAEHIGE F+G +TGV+PKG+YVQ+ KYLADGM++K DLPGD TRS + P W+I Sbjct: 447 VELIFDENGKVIDAEPEDDAFTHTLIEMFMVEANEAVATLFESLGVPVIRRIHPEPTPNDTDDLRRAATVAGYKIPKSPDRFELQALLDATAGTDAARAVHMAVLRTLTKATYSPALIGHYALASHAYSHFTSPIRRYPDLTVHRSLVAYLERTDNGRNRPRDDQARVALGRELKEDERCPHQQELVEIGNHCSNTEVNATEAERELRQFLVLQLMAEHIGEEFEGVVTGVSPKGVYVQLNKYLADGMIQKSDLPGDTTRSNRPPTWKI 715
BLAST of mRNA_M-pyrifera_M_contig89277.20694.1 vs. uniprot
Match: A0A3M2B9V8_9BACT (Ribonuclease R n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2B9V8_9BACT) HSP 1 Score: 368 bits (944), Expect = 8.440e-119 Identity = 188/269 (69.89%), Postives = 213/269 (79.18%), Query Frame = 1 Query: 1 VNLIFDDNGKVIDAEPEDDAYTHTLIEMFMVEANESLASLFEMLRVPVLRRIHPEPTPGDADVLRKTAMVAGFRIPKSPTREELQGLLDATAGTGASRAVHNAVLRTLTKASYSPQLIGHYALASKAYSHFTSPIRRYPDLTLHRAMFAYLKKTSNGENRPKSDEAWIKLGKELNEHPYCPHEQELFEIGTQCSNTEVNAAGAERSLRQFLILQLMAEHIGESFDGFITGVTPKGIYVQIAKYLADGMVKKHDLPGDVTRSKKQPKWRI 807 V L+FD+NGKVIDAE EDDAYTHT+IEM MVEANE LA LFE LRVP+LRR+HPEP P D D L+K A VAGF IPKSPTREE+Q LLDAT GT A+RAVH AVLRTLTKA YSP IGH+ALAS AYSHFTSPIRRYPDLT+HRA+ YL+ T NG+NRPK+D LG L + P E L EIG CS TE NAA AER LRQFL+LQL+AE IGE F G +TGV P+G++VQI KYLADGM+K+ DLPGDVTRS K P+W+I Sbjct: 457 VVLLFDENGKVIDAEKEDDAYTHTIIEMLMVEANEVLARLFEGLRVPLLRRVHPEPAPSDVDHLQKAARVAGFTIPKSPTREEIQALLDATRGTPAARAVHMAVLRTLTKAEYSPAAIGHFALASGAYSHFTSPIRRYPDLTVHRALAEYLRLTDNGQNRPKTDREKRALGARLRDR--LPDEATLVEIGRHCSQTEENAANAERELRQFLVLQLLAEKIGEEFTGVVTGVVPRGVFVQIDKYLADGMIKREDLPGDVTRSNKPPRWQI 723
BLAST of mRNA_M-pyrifera_M_contig89277.20694.1 vs. uniprot
Match: A0A7C5WPY2_9BACT (Ribonuclease R n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C5WPY2_9BACT) HSP 1 Score: 364 bits (934), Expect = 3.280e-117 Identity = 180/268 (67.16%), Postives = 219/268 (81.72%), Query Frame = 1 Query: 1 VNLIFDDNGKVIDAEPEDDAYTHTLIEMFMVEANESLASLFEMLRVPVLRRIHPEPTPGDADVLRKTAMVAGFRIPKSPTREELQGLLDATAGTGASRAVHNAVLRTLTKASYSPQLIGHYALASKAYSHFTSPIRRYPDLTLHRAMFAYLKKTSNGENRPKSDEAWIKLGKELNEHPYCPHEQELFEIGTQCSNTEVNAAGAERSLRQFLILQLMAE-HIGESFDGFITGVTPKGIYVQIAKYLADGMVKKHDLPGDVTRSKKQPKW 801 V LIFD++G+VIDAE EDDAYTH LIEMFMVEANE++ASLFE L VP++RRIHP+P PGD + ++K A VAG+RIP+SPTREE+QGLLDAT G A+RAVH AVLRTLTKA YSP LIGH+ALAS+AY+HFTSPIRRY DLT+HR++ AYL++T+NG NRP+ DE W LGKEL CP E L +IG + TE NA AER LRQ+L+LQL++E HIG+ G +TGVTP+G++VQI KYLADGM+KK DLPGDVTR K+P+W Sbjct: 459 VELIFDEDGRVIDAEQEDDAYTHKLIEMFMVEANEAIASLFERLGVPLIRRIHPDPAPGDVEHIQKAATVAGYRIPQSPTREEIQGLLDATRGKPAARAVHMAVLRTLTKAEYSPALIGHFALASEAYAHFTSPIRRYADLTVHRSVEAYLRRTNNGTNRPRDDEEWKALGKELRGDHNCPPEPALVDIGRHITATEQNAEDAERELRQYLVLQLLSEKHIGDVMPGVVTGVTPRGVFVQIDKYLADGMIKKEDLPGDVTRDNKRPRW 726
BLAST of mRNA_M-pyrifera_M_contig89277.20694.1 vs. uniprot
Match: A0A5M4D1D7_9CYAN (Ribonuclease R n=1 Tax=Cyanobacteria bacterium CYA TaxID=2484221 RepID=A0A5M4D1D7_9CYAN) HSP 1 Score: 360 bits (923), Expect = 1.150e-115 Identity = 184/269 (68.40%), Postives = 211/269 (78.44%), Query Frame = 1 Query: 1 VNLIFDDNGKVIDAEPEDDAYTHTLIEMFMVEANESLASLFEMLRVPVLRRIHPEPTPGDADVLRKTAMVAGFRIPKSPTREELQGLLDATAGTGASRAVHNAVLRTLTKASYSPQLIGHYALASKAYSHFTSPIRRYPDLTLHRAMFAYLKKTSNGENRPKSDEAWIKLGKELNEHPYCPHEQELFEIGTQCSNTEVNAAGAERSLRQFLILQLMAEHIGESFDGFITGVTPKGIYVQIAKYLADGMVKKHDLPGDVTRSKKQPKWRI 807 V L+FD+NGKVIDAE EDDAYTHT+IEM MVEANE LA LFE +RVP+LRR+HPEP P + D L+K A VAGF IPKSPTREE+QGLLDAT GT A+RAVH AVLRTLTKA YSP IGH+ALAS AYSHFTSPIRRYPDLT+HRA+ YL++T+NG+NRP +D LG L P E L +G CS TE NA AER LRQFL+LQL+AE IGE F G ITGV P+G++VQI KYLADGM+K+ DLPGDVTRS K P W+I Sbjct: 457 VVLLFDENGKVIDAEKEDDAYTHTIIEMLMVEANEVLARLFEGMRVPLLRRVHPEPAPAEVDHLQKAARVAGFTIPKSPTREEIQGLLDATRGTPAARAVHMAVLRTLTKAEYSPAAIGHFALASGAYSHFTSPIRRYPDLTVHRALAEYLEETNNGQNRPTTDREKHALGGRLRGR--LPDEPTLVAVGKHCSQTEQNAEDAERELRQFLVLQLLAEKIGEEFSGVITGVVPRGVFVQIDKYLADGMIKREDLPGDVTRSNKPPNWQI 723
BLAST of mRNA_M-pyrifera_M_contig89277.20694.1 vs. uniprot
Match: A0A2E2NAU7_9BACT (S1 motif domain-containing protein (Fragment) n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E2NAU7_9BACT) HSP 1 Score: 351 bits (900), Expect = 1.670e-115 Identity = 175/268 (65.30%), Postives = 211/268 (78.73%), Query Frame = 1 Query: 1 VNLIFDDNGKVIDAEPEDDAYTHTLIEMFMVEANESLASLFEMLRVPVLRRIHPEPTPGDADVLRKTAMVAGFRIPKSPTREELQGLLDATAGTGASRAVHNAVLRTLTKASYSPQLIGHYALASKAYSHFTSPIRRYPDLTLHRAMFAYLKKTSNGENRPKSDEAWIKLGKELNEHPYCPHEQELFEIGTQCSNTEVNAAGAERSLRQFLILQLMAE-HIGESFDGFITGVTPKGIYVQIAKYLADGMVKKHDLPGDVTRSKKQPKW 801 V LIFD++GKV+D +PEDDAYTH LIEMFMVEANE +A LFE L VP++RRIHPEP P D D L+K A VAGF+IPKSP+REE+QGLL+AT G+ ASR+V AVLRTL A YSP LIGH+ALAS AY+HFTSPIRRYPDLT+HR++ YL+ T NG PK DEA LGK+L E CP E+ L E G C+ TE NA AER LRQFL+LQL++E HIG+ F G +TGVTP+G++VQI ++LADGM+KK DLPGDV+R K P+W Sbjct: 164 VELIFDEDGKVVDGQPEDDAYTHKLIEMFMVEANEVVARLFEDLGVPLIRRIHPEPMPNDVDHLQKAANVAGFKIPKSPSREEMQGLLEATKGSPASRSVSLAVLRTLAMAEYSPALIGHFALASSAYAHFTSPIRRYPDLTVHRSIAEYLRATKNGTQAPKGDEAKANLGKQLLERKDCPAEETLVEFGRHCTATEQNAESAERELRQFLVLQLLSEKHIGDEFGGVVTGVTPRGVFVQIDRFLADGMIKKEDLPGDVSRDAKPPRW 431
BLAST of mRNA_M-pyrifera_M_contig89277.20694.1 vs. uniprot
Match: A0A7Y5SAJ0_9BACT (Ribonuclease R n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Y5SAJ0_9BACT) HSP 1 Score: 358 bits (920), Expect = 2.210e-115 Identity = 180/269 (66.91%), Postives = 215/269 (79.93%), Query Frame = 1 Query: 1 VNLIFDDNGKVIDAEPEDDAYTHTLIEMFMVEANESLASLFEMLRVPVLRRIHPEPTPGDADVLRKTAMVAGFRIPKSPTREELQGLLDATAGTGASRAVHNAVLRTLTKASYSPQLIGHYALASKAYSHFTSPIRRYPDLTLHRAMFAYLKKTSNGENRPKSDEAWIKLGKELNEHPYCPHEQELFEIGTQCSNTEVNAAGAERSLRQFLILQLMAEHIGESFDGFITGVTPKGIYVQIAKYLADGMVKKHDLPGDVTRSKKQPKWRI 807 V LIFD++G V+DAE EDDA+THTLIEMFMVEANE LA LFE L VP+LRR+HPEPTPGD D LR++AMVAGF+IPK+PTREELQGL++AT GT A+RAVH AVLRTLTKA YSP L+GH+ALAS+AY+HFTSPIRRY DLT+HRA+ AYLK+T NG RP +DE LG+ L + CP E +L EIG + E NA AE SLR+FL+LQL+ +HIGESF G +TGV +G++VQ+ KYLADG VK DLPGDVTRS P W+I Sbjct: 444 VVLIFDEHGHVVDAEREDDAFTHTLIEMFMVEANEVLARLFERLNVPLLRRVHPEPTPGDTDDLRRSAMVAGFKIPKNPTREELQGLVNATRGTPAARAVHMAVLRTLTKAEYSPALVGHFALASEAYAHFTSPIRRYADLTVHRALAAYLKETENGRLRPATDEEGAALGRRLRDSNLCPPEVDLIEIGRHATMRETNAEDAEHSLRKFLVLQLLEKHIGESFRGVVTGVNNRGVFVQLDKYLADGFVKSSDLPGDVTRSNLPPIWKI 712
BLAST of mRNA_M-pyrifera_M_contig89277.20694.1 vs. uniprot
Match: A0A7D8YFS4_9BACT (Ribonuclease R n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7D8YFS4_9BACT) HSP 1 Score: 357 bits (916), Expect = 1.230e-114 Identity = 180/271 (66.42%), Postives = 216/271 (79.70%), Query Frame = 1 Query: 1 VNLIFDDNGKVIDAEPEDDAYTHTLIEMFMVEANESLASLFEMLRVPVLRRIHPEPTPGDADVLRKTAMVAGFRIPKSPTREELQGLLDATAGTGASRAVHNAVLRTLTKASYSPQLIGHYALASKAYSHFTSPIRRYPDLTLHRAMFAYLKKTSNGENRPKSDE--AWIKLGKELNEHPYCPHEQELFEIGTQCSNTEVNAAGAERSLRQFLILQLMAEHIGESFDGFITGVTPKGIYVQIAKYLADGMVKKHDLPGDVTRSKKQPKWRI 807 V LIFD++GKV+DAE EDDAYTH +IEMFMVEANE LA LFE + VP+LRR H +PTPGD D LR+ AMVAGFRIP SP+REE+Q LLDATAGT A+RAVH AVLRTL+KASYSP LIGH+ALAS+AY+HFTSPIRRYPDLT+HRA+ AYL++T NG+ RP+ D+ A LG +L E CP ++EL EIG CS TE A AER LRQFL+LQL+ IGESF +TGVTP+G++VQI KYLADG++ K DLPGD +R + PKW + Sbjct: 456 VELIFDEDGKVVDAEREDDAYTHKIIEMFMVEANEVLARLFENMDVPLLRRTHADPTPGDQDNLRRAAMVAGFRIPASPSREEMQSLLDATAGTPAARAVHMAVLRTLSKASYSPALIGHFALASEAYAHFTSPIRRYPDLTVHRALGAYLRETDNGKKRPRPDDEKALRNLGIKLLESGACPSQEELVEIGRHCSKTEERATAAERELRQFLVLQLLETKIGESFSAVVTGVTPRGVFVQIDKYLADGLILKEDLPGDTSRGNQTPKWSV 726
BLAST of mRNA_M-pyrifera_M_contig89277.20694.1 vs. uniprot
Match: A0A7L9BMA2_9BACT (Ribonuclease R n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A7L9BMA2_9BACT) HSP 1 Score: 352 bits (903), Expect = 8.550e-113 Identity = 179/269 (66.54%), Postives = 211/269 (78.44%), Query Frame = 1 Query: 1 VNLIFDDNGKVIDAEPEDDAYTHTLIEMFMVEANESLASLFEMLRVPVLRRIHPEPTPGDADVLRKTAMVAGFRIPKSPTREELQGLLDATAGTGASRAVHNAVLRTLTKASYSPQLIGHYALASKAYSHFTSPIRRYPDLTLHRAMFAYLKKTSNGENRPKSDEAWIKLGKELNEHPYCPHEQELFEIGTQCSNTEVNAAGAERSLRQFLILQLMAEHIGESFDGFITGVTPKGIYVQIAKYLADGMVKKHDLPGDVTRSKKQPKWRI 807 V L FD+ G+VIDAE EDDAYTHTLIEMFMVEANE +A L E L VP+LRR+HP+PTPGD D LRKTA VAGF+IP+ PTREELQGLLDAT GT ASRAVH AVLRTLTKA YSP IGH+ALAS+AY+HFTSPIRRY DLT+HR + YL+ TSNG RP+SDE +LG++L + CP E EL EIG S E NA AE+SL++FL+LQL+ H+GE++ G +TGV PKG++VQI KYL DG VK+ DLPGDVTR P W+I Sbjct: 450 VVLKFDEQGRVIDAEKEDDAYTHTLIEMFMVEANEVVARLAERLGVPMLRRVHPDPTPGDVDELRKTANVAGFKIPQKPTREELQGLLDATRGTPASRAVHMAVLRTLTKAEYSPLTIGHFALASEAYAHFTSPIRRYADLTVHRVIGEYLRMTSNGAARPRSDEDRKRLGRDLRDSDLCPDEGELTEIGRHASMREKNAEDAEQSLKKFLVLQLLEGHVGETYAGVVTGVNPKGVFVQIDKYLIDGFVKREDLPGDVTRDNISPVWKI 718
BLAST of mRNA_M-pyrifera_M_contig89277.20694.1 vs. uniprot
Match: A0A651I5S5_9BACT (Exoribonuclease II (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A651I5S5_9BACT) HSP 1 Score: 350 bits (899), Expect = 1.970e-112 Identity = 169/269 (62.83%), Postives = 215/269 (79.93%), Query Frame = 1 Query: 1 VNLIFDDNGKVIDAEPEDDAYTHTLIEMFMVEANESLASLFEMLRVPVLRRIHPEPTPGDADVLRKTAMVAGFRIPKSPTREELQGLLDATAGTGASRAVHNAVLRTLTKASYSPQLIGHYALASKAYSHFTSPIRRYPDLTLHRAMFAYLKKTSNGENRPKSDEAWIKLGKELNEHPYCPHEQELFEIGTQCSNTEVNAAGAERSLRQFLILQLMAEHIGESFDGFITGVTPKGIYVQIAKYLADGMVKKHDLPGDVTRSKKQPKWRI 807 V LIFD+NG+VIDAEPEDDA+THT+IEMFMVEANE +A LFE + VP+LRR+HPEPTPGD + LRK A VAG++IPK+PTR+ELQ LL+AT GT ASRAVH AVLRTLTKA YSP LIGH+ALAS+AY+HFTSPIRRYPDLT+H A+ YL++T NG RP+ + LG+EL + C ++L +G CS TE A AER LRQFL+LQL+A+ IGE +D +TGV+P+G+++Q+ K+L+DG++K DLPGDVTR ++P W+I Sbjct: 446 VELIFDENGRVIDAEPEDDAFTHTIIEMFMVEANEIVARLFESMSVPLLRRVHPEPTPGDTEDLRKAATVAGYKIPKNPTRDELQSLLNATRGTPASRAVHMAVLRTLTKAEYSPALIGHFALASEAYAHFTSPIRRYPDLTVHWALSEYLERTKNGSKRPRDSKERKNLGRELRDSERCLDLEDLVTLGKHCSGTEERATEAERELRQFLVLQLLADKIGEVYDAVVTGVSPRGVFIQLNKFLSDGLIKTSDLPGDVTRGGQRPNWKI 714 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89277.20694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89277.20694.1 >prot_M-pyrifera_M_contig89277.20694.1 ID=prot_M-pyrifera_M_contig89277.20694.1|Name=mRNA_M-pyrifera_M_contig89277.20694.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=269bp VNLIFDDNGKVIDAEPEDDAYTHTLIEMFMVEANESLASLFEMLRVPVLRback to top mRNA from alignment at M-pyrifera_M_contig89277:1..807- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89277.20694.1 ID=mRNA_M-pyrifera_M_contig89277.20694.1|Name=mRNA_M-pyrifera_M_contig89277.20694.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=807bp|location=Sequence derived from alignment at M-pyrifera_M_contig89277:1..807- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89277:1..807- >mRNA_M-pyrifera_M_contig89277.20694.1 ID=mRNA_M-pyrifera_M_contig89277.20694.1|Name=mRNA_M-pyrifera_M_contig89277.20694.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1614bp|location=Sequence derived from alignment at M-pyrifera_M_contig89277:1..807- (Macrocystis pyrifera P11B4 male)back to top |