mRNA_M-pyrifera_M_contig89260.20687.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89260.20687.1 vs. uniprot
Match: A0A2E3MG89_9GAMM (Transporter n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MG89_9GAMM) HSP 1 Score: 317 bits (812), Expect = 1.980e-103 Identity = 163/261 (62.45%), Postives = 205/261 (78.54%), Query Frame = 1 Query: 4 LLCVLIGYGVSTGHFREAVHFLFEPDLSELTGSAVLAAMGQAFFSLSIATGSIIMYGAYVPRNVSITSAAIAISLVDTAIALAAGLAIFPVVFANGMSPASGPGLIFQTLPIAFGQMSFGYIFALLFFLMLVFAAFTSTISLLEPSVAWVMETFRFTRAKAAWLMGGIIWLVGLTTVFSFNIGSDIKLFDLTMFELIDYFTANIMLPVGGLLTAIFAGWVLNRHFVRKELQVEDRFLYRSWRFAIRYITPCIVLIVFLDAM 786 LL VL+ Y + +GHF ++V +LF PD S+L ++AAMGQAFFSLS+ATGSI+MYGAY+PR+ S+T AA+ I+L DT +AL AGLAIFPVVFANG+ P+SGPGLIF+TLPIAFG M FG +FA LFF+MLVFAAFTS ISLLEPSVAW++ETF+ R KAA + IW VGL TV SFN ++IKLF LTMFE++D+ TANIMLP+GG AIFA W LNR R+ELQ+ D L+ +WRF +RYI+P +L+VF+ + Sbjct: 193 LLGVLVVYAMESGHFAQSVSYLFHPDFSKLKTHGIVAAMGQAFFSLSLATGSIMMYGAYLPRSASVTKAAVVIALSDTFVALLAGLAIFPVVFANGLEPSSGPGLIFETLPIAFGHMPFGNVFATLFFVMLVFAAFTSAISLLEPSVAWLIETFKIPRRKAAIISSFGIWFVGLVTVVSFNWAANIKLFKLTMFEVLDFLTANIMLPLGGFFIAIFAVWFLNRDVARRELQLPDGKLFSTWRFVVRYISPVAILVVFISVI 453
BLAST of mRNA_M-pyrifera_M_contig89260.20687.1 vs. uniprot
Match: A0A7C1BNP2_9GAMM (Sodium-dependent transporter (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1BNP2_9GAMM) HSP 1 Score: 292 bits (747), Expect = 6.350e-96 Identity = 151/272 (55.51%), Postives = 203/272 (74.63%), Query Frame = 1 Query: 1 LLLCVLIGYGVSTGHFREAVHFLFEPDLSELTGSAVLAAMGQAFFSLSIATGSIIMYGAYVPRNVSITSAAIAISLVDTAIALAAGLAIFPVVFANGMSPASGPGLIFQTLPIAFGQMSFGYIFALLFFLMLVFAAFTSTISLLEPSVAWVMETFRFTRAKAAWLMGGIIWLVGLTTVFSFNIGSDIKLF-------DLTMFELIDYFTANIMLPVGGLLTAIFAGWVLNRHFVRKELQVEDRFLYRSWRFAIRYITPCIVLIVFLDAMGMI 795 +LL VL+GY +++G F + V FLF+PD S++T + +L AMG AFF+LS+ G+I++YG+Y+P N SI +IA+SL+DT +AL AGLAIFP+VFANG+ P +GPGLIFQTLPIAFG M +G F +LFF++LVFAA++S+ISL+EP+VAW++E TR A+ + G + WL GL TV SFN+ SD+KL D T+F+L+DY TANIMLP+GGLL AIFA W ++R EL + DRF Y WRF +RYITP V+IVFL A+ +I Sbjct: 14 VLLFVLVGYALNSGGFEQGVVFLFQPDFSKITANGILIAMGHAFFTLSLGMGAIMVYGSYLPSNASIAKTSIAVSLMDTLVALLAGLAIFPIVFANGLEPGAGPGLIFQTLPIAFGHMQYGAFFGMLFFVLLVFAAWSSSISLIEPAVAWLVENKGMTRIFASVVAGLVTWLFGLLTVLSFNLWSDVKLLSSIEIFKDSTVFDLLDYLTANIMLPLGGLLIAIFAAWKMSRESTVDELGMGDRFFYPLWRFLVRYITPIAVIIVFLKAVSVI 285
BLAST of mRNA_M-pyrifera_M_contig89260.20687.1 vs. uniprot
Match: A0A524IGS8_9BACT (Sodium-dependent transporter (Fragment) n=1 Tax=Nitrospirales bacterium TaxID=2358460 RepID=A0A524IGS8_9BACT) HSP 1 Score: 290 bits (742), Expect = 1.630e-95 Identity = 141/261 (54.02%), Postives = 202/261 (77.39%), Query Frame = 1 Query: 13 VLIGYGVSTGHFREAVHFLFEPDLSELTGSAVLAAMGQAFFSLSIATGSIIMYGAYVPRNVSITSAAIAISLVDTAIALAAGLAIFPVVFANGMSPASGPGLIFQTLPIAFGQMSFGYIFALLFFLMLVFAAFTSTISLLEPSVAWVMETFRFTRAKAAWLMGGIIWLVGLTTVFSFNIGSDIKLFDLTMFELIDYFTANIMLPVGGLLTAIFAGWVLNRHFVRKELQVEDRFLYRSWRFAIRYITPCIVLIVFLDAMGMI 795 +++GY ++TG F + + FLF PD S+LTGS++LAAMGQAFFSLS+ G+I++YG+YVP++ SI + IAI+L DTA+AL AG+AIFP+VFAN + P SGPGLIFQTLP+AFG M+ G IF LFF++L+ AA+TS+ISL+EP V W++ETF +R KA+ G WL+GL TV+SFN+ +D+K F LT F+L+D+ T+N+MLP+GG+L A+FAGW+++ + EL + + LY +W+ +RYI P V IV L+A+G++ Sbjct: 1 LMVGYSMTTGFFGKGLEFLFTPDFSKLTGSSMLAAMGQAFFSLSLGMGTIMIYGSYVPKDTSIATTTIAIALADTAVALLAGMAIFPIVFANNLEPGSGPGLIFQTLPVAFGNMTGGIIFGSLFFILLLVAAWTSSISLIEPLVTWLIETFGMSRIKASLYSGVATWLLGLGTVWSFNLWADLKFFGLTFFDLLDFITSNLMLPLGGILIALFAGWIMSAEHTKAELYIANPLLYTAWQALVRYIAPVAVFIVLLNAIGIL 261
BLAST of mRNA_M-pyrifera_M_contig89260.20687.1 vs. uniprot
Match: A0A7K4E752_9EURY (Transporter n=1 Tax=Halobacteria archaeon TaxID=2670410 RepID=A0A7K4E752_9EURY) HSP 1 Score: 291 bits (746), Expect = 2.110e-93 Identity = 153/272 (56.25%), Postives = 201/272 (73.90%), Query Frame = 1 Query: 1 LLLCVLIGYGVSTGHFREAVHFLFEPDLSELTGSAVLAAMGQAFFSLSIATGSIIMYGAYVPRNVSITSAAIAISLVDTAIALAAGLAIFPVVFANGMSPASGPGLIFQTLPIAFGQMSFGYIFALLFFLMLVFAAFTSTISLLEPSVAWVMETFRFTRAKAAWLMGGIIWLVGLTTVFSFNIGSDIKLFDL-------TMFELIDYFTANIMLPVGGLLTAIFAGWVLNRHFVRKELQVEDRFLYRSWRFAIRYITPCIVLIVFLDAMGMI 795 +LL +L+GY ++G F++ + FLFEPD S++T + VL AMG AFF+LS+ G+I++YG+Y+P N SI +IA+S++DT +AL AG+AIFP+VFANG+ PA+GPGLIFQTLPIAFG M G F +LFFL+LVFAA+TS ISL+EP+VAW++E TR AA L G WLVGL TVFSFNI S++K + T+F+L+DY TANIMLP+GGLL A+FA W + R EL + D F YR WR +RYITP V IVFL+A+G+I Sbjct: 189 VLLLLLVGYAWNSGSFQQGLDFLFEPDFSQITANGVLIAMGHAFFTLSLGMGAIMVYGSYLPDNASIAKTSIAVSVMDTLVALLAGMAIFPIVFANGLEPAAGPGLIFQTLPIAFGHMDGGAFFGMLFFLLLVFAAWTSAISLIEPAVAWMVENLGMTRIYAAGLAGFSTWLVGLLTVFSFNIWSEVKPLSMIPVFAESTIFDLLDYLTANIMLPLGGLLIAVFAAWQMKRKSSVDELAMGDGFFYRLWRVLVRYITPVAVAIVFLNAIGVI 460
BLAST of mRNA_M-pyrifera_M_contig89260.20687.1 vs. uniprot
Match: A0A2A4PGE0_9GAMM (Transporter n=2 Tax=Piscirickettsiaceae TaxID=135616 RepID=A0A2A4PGE0_9GAMM) HSP 1 Score: 291 bits (744), Expect = 3.160e-93 Identity = 144/265 (54.34%), Postives = 198/265 (74.72%), Query Frame = 1 Query: 1 LLLCVLIGYGVSTGHFREAVHFLFEPDLSELTGSAVLAAMGQAFFSLSIATGSIIMYGAYVPRNVSITSAAIAISLVDTAIALAAGLAIFPVVFANGMSPASGPGLIFQTLPIAFGQMSFGYIFALLFFLMLVFAAFTSTISLLEPSVAWVMETFRFTRAKAAWLMGGIIWLVGLTTVFSFNIGSDIKLFDLTMFELIDYFTANIMLPVGGLLTAIFAGWVLNRHFVRKELQVEDRFLYRSWRFAIRYITPCIVLIVFLDAMGMI 795 ++L +L+GY V+ G F+E V FLF PD S++ +L AMG AFF+LS+ G+I++YG+Y+P VSI S I I+L DTA+AL AGL IFP+VFANG+ P SGPGLIFQTLPIAFG M++G F LFF++LVFAA++S+ISL+EP+VAW++E + +R +A G + W+ G+ TV SFN+ SDIKLFD T F+ +DY TANIMLP+GGL A+FAGWV+ + EL ++ +LY WRF IR+++P V+IVFL+ +G+I Sbjct: 186 VILLLLVGYSVNQGAFQEGVAFLFTPDFSKINSDGILTAMGHAFFTLSLGMGAIMVYGSYLPGKVSIGSTVIIIALADTAVALLAGLVIFPIVFANGLEPGSGPGLIFQTLPIAFGHMAYGAFFGTLFFVLLVFAAWSSSISLIEPAVAWLVENKKMSRMRACIWAGLVTWVFGIGTVLSFNVASDIKLFDKTFFDTLDYLTANIMLPLGGLFIALFAGWVMKKEMSANELSLKYSWLYNVWRFLIRFVSPAAVIIVFLNVIGLI 450
BLAST of mRNA_M-pyrifera_M_contig89260.20687.1 vs. uniprot
Match: A0A1X1QQ93_9GAMM (Transporter n=1 Tax=Cycloclasticus sp. symbiont of Bathymodiolus heckerae TaxID=1284675 RepID=A0A1X1QQ93_9GAMM) HSP 1 Score: 290 bits (742), Expect = 6.330e-93 Identity = 142/265 (53.58%), Postives = 202/265 (76.23%), Query Frame = 1 Query: 1 LLLCVLIGYGVSTGHFREAVHFLFEPDLSELTGSAVLAAMGQAFFSLSIATGSIIMYGAYVPRNVSITSAAIAISLVDTAIALAAGLAIFPVVFANGMSPASGPGLIFQTLPIAFGQMSFGYIFALLFFLMLVFAAFTSTISLLEPSVAWVMETFRFTRAKAAWLMGGIIWLVGLTTVFSFNIGSDIKLFDLTMFELIDYFTANIMLPVGGLLTAIFAGWVLNRHFVRKELQVEDRFLYRSWRFAIRYITPCIVLIVFLDAMGMI 795 +LL +L+GY + G F+EAV FLF D S++T +L AMG AFF+LS+ G+I++YG+Y+P NVSI S A+ I+L DTA+AL AGLAIFP+VFANG+ P SGPGLIFQTLPIAFG M++G F LFF++LVFAA++S+ISL+EP+VAW++E + +R +A G + W+VG+ TV SFNI S+IK+FD T F+++DY TANIMLP+ GL A+FAGWV+ + +EL + +L+++W F +++++P V+IVFL A+ +I Sbjct: 186 VLLVLLVGYAIDQGAFKEAVSFLFSADFSKITSDGILIAMGHAFFTLSLGMGAIMVYGSYLPSNVSIGSTAVIIALADTAVALLAGLAIFPIVFANGLEPGSGPGLIFQTLPIAFGHMAYGSFFGTLFFILLVFAAWSSSISLIEPAVAWLVENKKMSRMRACIWSGLVTWIVGIGTVLSFNITSNIKIFDKTFFDVLDYLTANIMLPLAGLCIALFAGWVMTKESAEEELDFKQLYLFKTWLFLVKFVSPVAVVIVFLKAINVI 450
BLAST of mRNA_M-pyrifera_M_contig89260.20687.1 vs. uniprot
Match: A0A7Y4XX27_9GAMM (Transporter n=1 Tax=Methylococcaceae bacterium TaxID=1933926 RepID=A0A7Y4XX27_9GAMM) HSP 1 Score: 290 bits (742), Expect = 6.910e-93 Identity = 143/265 (53.96%), Postives = 200/265 (75.47%), Query Frame = 1 Query: 1 LLLCVLIGYGVSTGHFREAVHFLFEPDLSELTGSAVLAAMGQAFFSLSIATGSIIMYGAYVPRNVSITSAAIAISLVDTAIALAAGLAIFPVVFANGMSPASGPGLIFQTLPIAFGQMSFGYIFALLFFLMLVFAAFTSTISLLEPSVAWVMETFRFTRAKAAWLMGGIIWLVGLTTVFSFNIGSDIKLFDLTMFELIDYFTANIMLPVGGLLTAIFAGWVLNRHFVRKELQVEDRFLYRSWRFAIRYITPCIVLIVFLDAMGMI 795 +LL VL+GY ++TG + + +HFLF+PD S++TG+AVL AMG AFF+LS+ G+I++YGAY+P+NVSI +I I+ D+ +AL AGLAIFP+VFAN + P+SGPGLIFQTLPIAFG M+ G++ +LFF+MLVFAA TS IS++EP+VAW++ET RF R A G +WL+GL TVFSFN+ +DIK+FD T F+L+DY TAN+MLP+GG AIF+GW++ + EL + YR W+ +RY+ P + +VFL +G++ Sbjct: 189 VLLVVLVGYAMTTGAYAQGLHFLFKPDFSKITGNAVLIAMGHAFFTLSLGMGAIMVYGAYLPKNVSIAQTSILIAAADSIVALLAGLAIFPIVFANHLEPSSGPGLIFQTLPIAFGNMTGGWLIGILFFVMLVFAALTSAISVIEPAVAWLVETDRFDRKTACIWSGLTVWLLGLGTVFSFNVWADIKVFDKTFFQLLDYLTANLMLPIGGFCIAIFSGWIMLQKHSEAELAFSNPLYYRLWQNLVRYVAPVGIFLVFLHVVGVL 453
BLAST of mRNA_M-pyrifera_M_contig89260.20687.1 vs. uniprot
Match: UPI00124D681D (sodium-dependent transporter n=1 Tax=Nitrincola alkalilacustris TaxID=1571224 RepID=UPI00124D681D) HSP 1 Score: 289 bits (739), Expect = 3.010e-92 Identity = 142/265 (53.58%), Postives = 199/265 (75.09%), Query Frame = 1 Query: 1 LLLCVLIGYGVSTGHFREAVHFLFEPDLSELTGSAVLAAMGQAFFSLSIATGSIIMYGAYVPRNVSITSAAIAISLVDTAIALAAGLAIFPVVFANGMSPASGPGLIFQTLPIAFGQMSFGYIFALLFFLMLVFAAFTSTISLLEPSVAWVMETFRFTRAKAAWLMGGIIWLVGLTTVFSFNIGSDIKLFDLTMFELIDYFTANIMLPVGGLLTAIFAGWVLNRHFVRKELQVEDRFLYRSWRFAIRYITPCIVLIVFLDAMGMI 795 +LL V++GY + TGHF E V FLF+ D S++TG+A L A+G AFF+LS+A+G+I+ YG+Y+P NVSI + I+++DT +ALAAGLAIFP+VFANG+ P +GPGLIF TLPIAFGQM FG F LFFL+L AA TS ISLLEP+++W+ E F+ TR KA L GG++WL GL V S N+G++ LF T F+++DY T++ ++P+GGLL AIF+GW+L + ++ EL + LY+ W F +RY+TP ++IVFL A+G++ Sbjct: 202 VLLLVMVGYAMGTGHFAEGVSFLFKADFSKMTGTAFLVALGHAFFTLSLASGAIMTYGSYLPDNVSIGKTTLLIAIMDTVVALAAGLAIFPLVFANGLEPGAGPGLIFVTLPIAFGQMPFGSAFGTLFFLLLAIAALTSAISLLEPTISWLTEKFQMTRIKACLLAGGLLWLGGLGVVTSLNVGAEWTLFGKTFFDMLDYLTSSWLMPLGGLLMAIFSGWILKKTVMQDELGMGSGMLYQLWSFTMRYVTPLAIIIVFLHALGIV 466
BLAST of mRNA_M-pyrifera_M_contig89260.20687.1 vs. uniprot
Match: A0A2A5EAM3_9BACT (Transporter n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A2A5EAM3_9BACT) HSP 1 Score: 288 bits (736), Expect = 6.030e-92 Identity = 143/265 (53.96%), Postives = 192/265 (72.45%), Query Frame = 1 Query: 1 LLLCVLIGYGVSTGHFREAVHFLFEPDLSELTGSAVLAAMGQAFFSLSIATGSIIMYGAYVPRNVSITSAAIAISLVDTAIALAAGLAIFPVVFANGMSPASGPGLIFQTLPIAFGQMSFGYIFALLFFLMLVFAAFTSTISLLEPSVAWVMETFRFTRAKAAWLMGGIIWLVGLTTVFSFNIGSDIKLFDLTMFELIDYFTANIMLPVGGLLTAIFAGWVLNRHFVRKELQVEDRFLYRSWRFAIRYITPCIVLIVFLDAMGMI 795 L+L +L+GY ++TGHF E FLF PD S++T S VL A+G AFF+LS+A+G+++ YGAY+P VSI +I ++L DT IAL AGL IFP+ F G+ P GP LIF +LPIAFGQM FG F LFF+MLVFAA TS I+LLEPSV W+ME +FTR +AA L+GG +W++ L TVFS N GSDI LF T F+ +DY TANI++P+GGLL A+F GW + R+EL + D + W F +R++ P ++LIVFL+A+G++ Sbjct: 189 LILLILLGYSLNTGHFMEGASFLFRPDFSKITPSGVLQALGHAFFTLSLASGAMMAYGAYLPEKVSIAQTSIIVALADTMIALIAGLVIFPICFTYGLEPDEGPALIFISLPIAFGQMPFGLFFGTLFFIMLVFAAITSAIALLEPSVVWLMENRKFTRGRAASLLGGGLWILSLGTVFSLNYGSDITLFGKTYFDNVDYLTANILMPLGGLLVALFTGWAMKEAVTREELDLHDHPFFAFWLFTMRFVAPVLILIVFLNAIGIL 453
BLAST of mRNA_M-pyrifera_M_contig89260.20687.1 vs. uniprot
Match: A0A7C7CAR1_9GAMM (Transporter n=1 Tax=Chromatiaceae bacterium TaxID=2049432 RepID=A0A7C7CAR1_9GAMM) HSP 1 Score: 288 bits (736), Expect = 7.380e-92 Identity = 147/272 (54.04%), Postives = 203/272 (74.63%), Query Frame = 1 Query: 1 LLLCVLIGYGVSTGHFREAVHFLFEPDLSELTGSAVLAAMGQAFFSLSIATGSIIMYGAYVPRNVSITSAAIAISLVDTAIALAAGLAIFPVVFANGMSPASGPGLIFQTLPIAFGQMSFGYIFALLFFLMLVFAAFTSTISLLEPSVAWVMETFRFTRAKAAWLMGGIIWLVGLTTVFSFNIGSDIK-------LFDLTMFELIDYFTANIMLPVGGLLTAIFAGWVLNRHFVRKELQVEDRFLYRSWRFAIRYITPCIVLIVFLDAMGMI 795 +LL +L+GY +TGHF EA+ FLF+PD S+L+ +VL AMG AFF+LS+ G+I++YG+Y+P NVSI +I I+++DT +AL AG+AIFP+VFANG+ P SGPGLIF+TLPIAFG MSFG +F +LFFL+L FAA+TS ISL+EP+VAW++E TR ++ G ++WLVGL +VFSFN+ S+ + D F+++D+ T+N+MLP+GGLL A+FA W L+R EL++ D Y WRF +RYITP VLIVFLDA+G++ Sbjct: 189 VLLFLLVGYAYTTGHFGEALEFLFKPDFSKLSAESVLIAMGHAFFTLSLGMGAIMVYGSYLPANVSIARTSIIIAVLDTLVALLAGMAIFPIVFANGLEPGSGPGLIFETLPIAFGHMSFGTLFGVLFFLLLSFAAWTSAISLIEPAVAWLVENRNMTRVQSTIWCGVVVWLVGLGSVFSFNLWSEFRPLGMFPVFADKNFFDVLDFITSNVMLPLGGLLIAVFAAWRLSRSTSFDELKMGDGLAYPLWRFLVRYITPIAVLIVFLDALGIL 460 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89260.20687.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89260.20687.1 >prot_M-pyrifera_M_contig89260.20687.1 ID=prot_M-pyrifera_M_contig89260.20687.1|Name=mRNA_M-pyrifera_M_contig89260.20687.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=266bp LLLCVLIGYGVSTGHFREAVHFLFEPDLSELTGSAVLAAMGQAFFSLSIAback to top mRNA from alignment at M-pyrifera_M_contig89260:9..806- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89260.20687.1 ID=mRNA_M-pyrifera_M_contig89260.20687.1|Name=mRNA_M-pyrifera_M_contig89260.20687.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig89260:9..806- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89260:9..806- >mRNA_M-pyrifera_M_contig89260.20687.1 ID=mRNA_M-pyrifera_M_contig89260.20687.1|Name=mRNA_M-pyrifera_M_contig89260.20687.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1596bp|location=Sequence derived from alignment at M-pyrifera_M_contig89260:9..806- (Macrocystis pyrifera P11B4 male)back to top |