mRNA_M-pyrifera_M_contig89253.20683.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89253.20683.1
Unique NamemRNA_M-pyrifera_M_contig89253.20683.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89253.20683.1 vs. uniprot
Match: D3B2A8_POLPP (Phospholipid-transporting ATPase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B2A8_POLPP)

HSP 1 Score: 235 bits (599), Expect = 1.390e-67
Identity = 118/227 (51.98%), Postives = 165/227 (72.69%), Query Frame = 1
Query:    1 EAMSLENTLWASTVLASDTVIGIVAYTGSETRSVINTSTPATKKGILDMEVNHLTVVLCILQVLLGFVLVIGGLFKGVWWLNYFKFLILISSIIPISMRVNLDFAKLVYSFSIVTDPDIPGCTVRNTSIPEELGRVSYLLSDKTGTLTQNDMIFRKLHLGVANFSVDCIEDLKESLELAYRGPGEESSRVRV---RNRDIVAQRVNDTVHALALCHNVTPVIDDTAH 672
            E++S+ENTLWA+TV+AS  VIG   YTG ETR V+NTS P+TK G+LD E+N L+ +L +L   L FV++    F+G+W++  F+F++L SSIIPISMRVNLD  K  YSF ++ D  IPG  VR+++IPEELGR+ YLL+DKTGTLTQNDM+F+KLHLG  +++ D + DL++ L  +Y+ P   S+R  V   R+R  +  ++ + + A+ALCHNVTPV+ D  H
Sbjct:  485 ESISVENTLWANTVVASGNVIGCAIYTGRETRCVMNTSIPSTKVGLLDQEINTLSKLLFVLLCFLSFVMIAVKGFRGLWYIYLFRFILLFSSIIPISMRVNLDLGKTAYSFMMMRDKQIPGTVVRSSTIPEELGRIEYLLTDKTGTLTQNDMVFKKLHLGSISYTKDSLSDLQQELRSSYQIPSSSSNRNSVAPSRSRRNLGTKIKEAITAIALCHNVTPVVTDDTH 711          
BLAST of mRNA_M-pyrifera_M_contig89253.20683.1 vs. uniprot
Match: A0A8J4UYP7_9MYCE (Phospholipid-transporting ATPase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UYP7_9MYCE)

HSP 1 Score: 233 bits (595), Expect = 4.340e-67
Identity = 118/227 (51.98%), Postives = 166/227 (73.13%), Query Frame = 1
Query:    1 EAMSLENTLWASTVLASDTVIGIVAYTGSETRSVINTSTPATKKGILDMEVNHLTVVLCILQVLLGFVLVIGGLFKGVWWLNYFKFLILISSIIPISMRVNLDFAKLVYSFSIVTDPDIPGCTVRNTSIPEELGRVSYLLSDKTGTLTQNDMIFRKLHLGVANFSVDCIEDLKESLELAYRGP------GEESSRVRVRNRDIVAQRVNDTVHALALCHNVTPVIDD 663
            E++S+ENTLW++TV+AS  VIG   YTG ETR V+NTSTP+TK G+LD E+N+L+ VL  L   L  +++    F+G+W++  F++L+L S+IIPISMRVNLD  K +YS+ ++ DP+IPG  VR+++IPEELGR+ YLL+DKTGTLTQNDM+F+KLHLG   FS + ++DL+  L L+Y         G  S+    RNR    Q++ +++ A+ALCHNVTPVI+D
Sbjct:  396 ESLSVENTLWSNTVIASGNVIGCAIYTGRETRCVMNTSTPSTKTGLLDSELNNLSKVLFALLCCLSLLMITLKGFRGLWYIYLFRYLLLFSAIIPISMRVNLDLGKTIYSWMMMRDPNIPGTIVRSSTIPEELGRIEYLLTDKTGTLTQNDMVFKKLHLGTVAFSKESLQDLENELRLSYSQAAKNNLNGSSSNNXSSRNRKNFNQKIRESITAIALCHNVTPVIED 622          
BLAST of mRNA_M-pyrifera_M_contig89253.20683.1 vs. uniprot
Match: A0A452QZD7_URSAM (Phospholipid-transporting ATPase n=1 Tax=Ursus americanus TaxID=9643 RepID=A0A452QZD7_URSAM)

HSP 1 Score: 228 bits (582), Expect = 4.650e-67
Identity = 121/228 (53.07%), Postives = 162/228 (71.05%), Query Frame = 1
Query:    1 EAMSLENTLWASTVLASDTVIGIVAYTGSETRSVINTSTPATKKGILDMEVNHLTVVLCILQVLLGFVLVIGGLFKGVWWLNYFKFLILISSIIPISMRVNLDFAKLVYSFSIVTDPDIPGCTVRNTSIPEELGRVSYLLSDKTGTLTQNDMIFRKLHLGVANFSVDCIEDLKESLELAY---RGPGEESSRVRVRNRDIVAQRVNDTVHALALCHNVTPVIDDTAHI 675
            E++S+ENTLWAST++AS TVIG+V YTG ETRSV+NTS P  K G+LD+E+NHLT  L +  V L  V+V    F G W+ N F+FL+L S IIPIS+RVNLD  K  Y + I+ D  IPG  VR ++IPEELGR+ YLL+DKTGTLTQN+M+F++LHLG  ++  D +++++  L   Y   R PG +SS  +VR    V+ RV++ V A+ALCHNVTPV +  A +
Sbjct:   95 ESLSIENTLWASTIVASGTVIGVVIYTGKETRSVMNTSNPKNKVGLLDLELNHLTKALFVALVALSVVMVTLQGFVGPWYRNLFRFLLLFSYIIPISLRVNLDMGKAAYGWMIMKDESIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMVFKRLHLGTVSYGADTMDEIQTHLRNPYSQVRPPGAQSSAPKVRKS--VSIRVHEAVKAIALCHNVTPVYEPRAGV 320          
BLAST of mRNA_M-pyrifera_M_contig89253.20683.1 vs. uniprot
Match: UPI000549B543 (probable phospholipid-transporting ATPase IIA n=1 Tax=Meleagris gallopavo TaxID=9103 RepID=UPI000549B543)

HSP 1 Score: 215 bits (547), Expect = 3.680e-66
Identity = 112/225 (49.78%), Postives = 160/225 (71.11%), Query Frame = 1
Query:    1 EAMSLENTLWASTVLASDTVIGIVAYTGSETRSVINTSTPATKKGILDMEVNHLTVVLCILQVLLGFVLVIGGLFKGVWWLNYFKFLILISSIIPISMRVNLDFAKLVYSFSIVTDPDIPGCTVRNTSIPEELGRVSYLLSDKTGTLTQNDMIFRKLHLGVANFSVDCIEDLKESLELAYRGPGEESSRVR-----VRNRDIVAQRVNDTVHALALCHNVTPVID 660
            E++S+ENTLWASTV+AS TV+G+V YTG E RSV+NTS P +K G+ D+EVN LT +L    V++  V+V    F G W+L   +FL+L S+IIPIS+RVNLD  K+VYS+ I  D  IPG  VR+++IPE+LGR+SYLL+DKTGTLTQN+M+F++LHLG   + +D +++++  +   Y    +E   V+      + R  ++ RV++ V A+ALCHNVTPV +
Sbjct:   38 ESLSIENTLWASTVIASGTVVGVVLYTGRELRSVMNTSNPRSKIGLFDLEVNCLTKILFGALVVVSLVMVALQHFAGRWYLQIIRFLLLFSNIIPISLRVNLDMGKIVYSWVIRRDSKIPGTVVRSSTIPEQLGRISYLLTDKTGTLTQNEMVFKRLHLGTVAYGLDSMDEVQSHIFSIYTQQSQEPPAVKGLALATKVRKTMSSRVHEAVKAIALCHNVTPVYE 262          
BLAST of mRNA_M-pyrifera_M_contig89253.20683.1 vs. uniprot
Match: A0A452QZ76_URSAM (Phospholipid-transporting ATPase n=2 Tax=Ursus americanus TaxID=9643 RepID=A0A452QZ76_URSAM)

HSP 1 Score: 228 bits (582), Expect = 5.580e-66
Identity = 121/228 (53.07%), Postives = 162/228 (71.05%), Query Frame = 1
Query:    1 EAMSLENTLWASTVLASDTVIGIVAYTGSETRSVINTSTPATKKGILDMEVNHLTVVLCILQVLLGFVLVIGGLFKGVWWLNYFKFLILISSIIPISMRVNLDFAKLVYSFSIVTDPDIPGCTVRNTSIPEELGRVSYLLSDKTGTLTQNDMIFRKLHLGVANFSVDCIEDLKESLELAY---RGPGEESSRVRVRNRDIVAQRVNDTVHALALCHNVTPVIDDTAHI 675
            E++S+ENTLWAST++AS TVIG+V YTG ETRSV+NTS P  K G+LD+E+NHLT  L +  V L  V+V    F G W+ N F+FL+L S IIPIS+RVNLD  K  Y + I+ D  IPG  VR ++IPEELGR+ YLL+DKTGTLTQN+M+F++LHLG  ++  D +++++  L   Y   R PG +SS  +VR    V+ RV++ V A+ALCHNVTPV +  A +
Sbjct:  129 ESLSIENTLWASTIVASGTVIGVVIYTGKETRSVMNTSNPKNKVGLLDLELNHLTKALFVALVALSVVMVTLQGFVGPWYRNLFRFLLLFSYIIPISLRVNLDMGKAAYGWMIMKDESIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMVFKRLHLGTVSYGADTMDEIQTHLRNPYSQVRPPGAQSSAPKVRKS--VSIRVHEAVKAIALCHNVTPVYEPRAGV 354          
BLAST of mRNA_M-pyrifera_M_contig89253.20683.1 vs. uniprot
Match: T2MJ08_HYDVU (Phospholipid-transporting ATPase (Fragment) n=2 Tax=Hydra vulgaris TaxID=6087 RepID=T2MJ08_HYDVU)

HSP 1 Score: 227 bits (578), Expect = 1.720e-65
Identity = 120/221 (54.30%), Postives = 160/221 (72.40%), Query Frame = 1
Query:    1 EAMSLENTLWASTVLASDTVIGIVAYTGSETRSVINTSTPATKKGILDMEVNHLTVVLCILQVLLGFVLVIGGLFKGVWWLNYFKFLILISSIIPISMRVNLDFAKLVYSFSIVTDPDIPGCTVRNTSIPEELGRVSYLLSDKTGTLTQNDMIFRKLHLGVANFSVDCIEDLKESLELAYRGPGEESSRVRVRNRDIVAQRVNDTVHALALCHNVTPVIDD 663
            E++S+ENTLWA+TV+AS T  G+V YTG ETRSV+NTS P +K G+LD E+N++T VL ++ V L   +++   FKG WW  + +F+IL S IIPIS+R+NLD AKL YS+ I  D +IPG  VR+++IPEELGRVSYLL+DKTGTLTQN+M+F+KLHLG  +F  D +E+++  L   Y       SR  +R    V  RV + V ALALCHNVTPV+D+
Sbjct:  126 ESLSVENTLWANTVVASGTACGVVIYTGYETRSVMNTSAPKSKFGLLDRELNNMTKVLFLMMVCLSLAIIVMKGFKGPWWKFFIRFIILFSYIIPISLRINLDMAKLCYSWLISKDKNIPGTVVRSSTIPEELGRVSYLLTDKTGTLTQNEMVFKKLHLGTVSFGQDSMEEVRTYLTSLY-------SRRLIRRT--VVTRVYEAVKALALCHNVTPVVDE 337          
BLAST of mRNA_M-pyrifera_M_contig89253.20683.1 vs. uniprot
Match: A0A2H6NDB4_MICLE (Uncharacterized protein n=1 Tax=Micrurus lemniscatus carvalhoi TaxID=129465 RepID=A0A2H6NDB4_MICLE)

HSP 1 Score: 213 bits (542), Expect = 1.850e-65
Identity = 115/233 (49.36%), Postives = 157/233 (67.38%), Query Frame = 1
Query:    1 EAMSLENTLWASTVLASDTVIGIVAYTGSETRSVINTSTPATKKGILDMEVNHLTVVLCILQVLLGFVLVIGGLFKGVWWLNYFKFLILISSIIPISMRVNLDFAKLVYSFSIVTDPDIPGCTVRNTSIPEELGRVSYLLSDKTGTLTQNDMIFRKLHLGVANFSVDCIEDLKESLELAY-----RGPGEESSRVRVRN--------RDIVAQRVNDTVHALALCHNVTPVID 660
            E++S+ENTLWASTV+AS TVIG+V YTG ETRSV+NTS P  K G+LD+E+N LT  L +  V L   +V    F G W+ N F+FL+L S IIPIS+RVNLD  K  Y + I+ D +IPG  VR ++IPEELGR+ YLL+DKTGTLTQN+MIF++LHLG  ++  D +++++  +  +Y     +  G  +S    R         R  V+ R+++ V A+ALCHNVTPV +
Sbjct:   21 ESLSIENTLWASTVVASGTVIGVVIYTGKETRSVMNTSNPKNKVGLLDLELNQLTKALFLALVALSVFMVTLQGFVGPWYRNLFRFLLLFSYIIPISLRVNLDMGKAAYGWMIMKDDNIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMIFKRLHLGTVSYGTDTMDEIQNHIINSYSQMHTQSSGNSTSSTPSRKMQSSAPKVRKTVSNRIHEAVKAIALCHNVTPVYE 253          
BLAST of mRNA_M-pyrifera_M_contig89253.20683.1 vs. uniprot
Match: A0A0R3WT32_HYDTA (PhoLip_ATPase_N domain-containing protein n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3WT32_HYDTA)

HSP 1 Score: 219 bits (559), Expect = 3.250e-65
Identity = 112/221 (50.68%), Postives = 161/221 (72.85%), Query Frame = 1
Query:    4 AMSLENTLWASTVLASDTVIGIVAYTGSETRSVINTSTPATKKGILDMEVNHLTVVLCILQVLLGFVLVIGGLFKGVWWLNYFKFLILISSIIPISMRVNLDFAKLVYSFSIVTDPDIPGCTVRNTSIPEELGRVSYLLSDKTGTLTQNDMIFRKLHLGVANFSVDCIEDLKESLELAYRGPGEESSRVRVRN-RDIVAQRVNDTVHALALCHNVTPVIDD 663
            ++S++ TLW++TVLA+ T +GIV Y GSETRSV+N+S   TK G +D E+N++T +L +  V+L FV+V    FKG W++ Y++F +L S IIP+++RVN+D AK+VYS  I  D D+PGC VR+T+IPEELGR++YLLSDKTGTLTQN+M+F+KLHLG   F+ D ++DL E+L   Y    +E   +  +  R    +R+ + V A+A+CHNVTP+ DD
Sbjct:  223 SLSVDQTLWSNTVLATGTAVGIVIYCGSETRSVMNSSKVHTKMGHIDREINNITKLLFVFVVILAFVMVALKGFKGAWYIYYWRFFLLFSYIIPLALRVNMDMAKIVYSLIITKDKDLPGCVVRSTTIPEELGRITYLLSDKTGTLTQNEMVFKKLHLGSVAFAPDSMDDLTETLRRYYDTLEKEGDAMDAKQLRKTGDERLVEAVLAIAICHNVTPMNDD 443          
BLAST of mRNA_M-pyrifera_M_contig89253.20683.1 vs. uniprot
Match: UPI00077A77E5 (probable phospholipid-transporting ATPase IIB n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A77E5)

HSP 1 Score: 226 bits (576), Expect = 3.620e-65
Identity = 117/228 (51.32%), Postives = 165/228 (72.37%), Query Frame = 1
Query:    7 MSLENTLWASTVLASDTVIGIVAYTGSETRSVINTSTPATKKGILDMEVNHLTVVLCILQVLLGFVLVIGGLFKGVWWLNYFKFLILISSIIPISMRVNLDFAKLVYSFSIVTDPDIPGCTVRNTSIPEELGRVSYLLSDKTGTLTQNDMIFRKLHLGVANFSVDCIEDLKESLELAY--------RGPGEESSRVRVRNRDIVAQRVNDTVHALALCHNVTPVIDDT 666
            +S+ENT+WA+TV+AS T +G+V YTGSETRSV+NTS P TK G+ D+EVN+LT +L +  + L FV+V    F G W+  +F+F++L S IIP+S+RV+LD  K+VYS+ I+ D DIPG  VR+++IPEELGR+ YLLSDKTGTLT+N+M+F++LHLG  +F  D +E++   ++ ++        +  G+  S+V    R  V  RV++ V ALALCHNVTPV DDT
Sbjct:  107 LSIENTMWANTVIASGTAVGVVIYTGSETRSVMNTSNPETKFGLTDLEVNNLTKLLFLATMSLSFVMVSIKGFNGPWYRYFFRFVLLFSYIIPLSLRVSLDLGKVVYSWMIIHDKDIPGTVVRSSTIPEELGRIGYLLSDKTGTLTENEMVFKRLHLGTVSFGTDSMEEVVSHVKSSFAPSSGATSKKTGQTGSKV----RRTVVTRVHEAVKALALCHNVTPVTDDT 330          
BLAST of mRNA_M-pyrifera_M_contig89253.20683.1 vs. uniprot
Match: UPI001CF13AA5 (probable phospholipid-transporting ATPase IIA isoform X1 n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF13AA5)

HSP 1 Score: 226 bits (576), Expect = 1.360e-64
Identity = 117/228 (51.32%), Postives = 165/228 (72.37%), Query Frame = 1
Query:    7 MSLENTLWASTVLASDTVIGIVAYTGSETRSVINTSTPATKKGILDMEVNHLTVVLCILQVLLGFVLVIGGLFKGVWWLNYFKFLILISSIIPISMRVNLDFAKLVYSFSIVTDPDIPGCTVRNTSIPEELGRVSYLLSDKTGTLTQNDMIFRKLHLGVANFSVDCIEDLKESLELAY--------RGPGEESSRVRVRNRDIVAQRVNDTVHALALCHNVTPVIDDT 666
            +S+ENT+WA+TV+AS T +G+V YTGSETRSV+NTS P TK G+ D+EVN+LT +L +  + L FV+V    F G W+  +F+F++L S IIP+S+RV+LD  K+VYS+ I+ D DIPG  VR+++IPEELGR+ YLLSDKTGTLT+N+M+F++LHLG  +F  D +E++   ++ ++        +  G+  S+V    R  V  RV++ V ALALCHNVTPV DDT
Sbjct:  352 LSIENTMWANTVIASGTAVGVVIYTGSETRSVMNTSNPETKFGLTDLEVNNLTKLLFLATMSLSFVMVSIKGFNGPWYRYFFRFVLLFSYIIPLSLRVSLDLGKVVYSWMIIHDKDIPGTVVRSSTIPEELGRIGYLLSDKTGTLTENEMVFKRLHLGTVSFGTDSMEEVVSHVKSSFAPSSGATSKKTGQTGSKV----RRTVVTRVHEAVKALALCHNVTPVTDDT 575          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89253.20683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D3B2A8_POLPP1.390e-6751.98Phospholipid-transporting ATPase n=1 Tax=Polysphon... [more]
A0A8J4UYP7_9MYCE4.340e-6751.98Phospholipid-transporting ATPase n=1 Tax=Polysphon... [more]
A0A452QZD7_URSAM4.650e-6753.07Phospholipid-transporting ATPase n=1 Tax=Ursus ame... [more]
UPI000549B5433.680e-6649.78probable phospholipid-transporting ATPase IIA n=1 ... [more]
A0A452QZ76_URSAM5.580e-6653.07Phospholipid-transporting ATPase n=2 Tax=Ursus ame... [more]
T2MJ08_HYDVU1.720e-6554.30Phospholipid-transporting ATPase (Fragment) n=2 Ta... [more]
A0A2H6NDB4_MICLE1.850e-6549.36Uncharacterized protein n=1 Tax=Micrurus lemniscat... [more]
A0A0R3WT32_HYDTA3.250e-6550.68PhoLip_ATPase_N domain-containing protein n=1 Tax=... [more]
UPI00077A77E53.620e-6551.32probable phospholipid-transporting ATPase IIB n=1 ... [more]
UPI001CF13AA51.360e-6451.32probable phospholipid-transporting ATPase IIA isof... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89253contigM-pyrifera_M_contig89253:8..793 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score226.9
Seed ortholog evalue9.6e-57
Seed eggNOG ortholog6087.XP_002155029.2
Preferred nameATP9A
KEGG koko:K01530
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003674,GO:0003824,GO:0004012,GO:0005215,GO:0005319,GO:0005548,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005794,GO:0005802,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006890,GO:0006897,GO:0007275,GO:0008150,GO:0009790,GO:0009792,GO:0009987,GO:0010876,GO:0012505,GO:0015711,GO:0015748,GO:0015914,GO:0016020,GO:0016021,GO:0016043,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031224,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0033036,GO:0034204,GO:0042623,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045332,GO:0048193,GO:0048471,GO:0048856,GO:0051179,GO:0051234,GO:0055037,GO:0061024,GO:0065007,GO:0065008,GO:0071702,GO:0071840,GO:0071944,GO:0097035,GO:0097708,GO:0098657,GO:0098791
EggNOG free text desc.Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily
EggNOG OGs38BSN@33154,3BC32@33208,KOG0210@1,KOG0210@2759
EC3.6.3.1
COG Functional cat.P
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons3
Model size681
Cds size675
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89253.20683.1prot_M-pyrifera_M_contig89253.20683.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89253 14..793 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816802.4391365-UTR-M-pyrifera_M_contig89253:7..131622816802.4391365-UTR-M-pyrifera_M_contig89253:7..13Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig89253 8..13 +
1692278187.4051194-UTR-M-pyrifera_M_contig89253:7..131692278187.4051194-UTR-M-pyrifera_M_contig89253:7..13Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig89253 8..13 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816802.4506745-CDS-M-pyrifera_M_contig89253:13..1361622816802.4506745-CDS-M-pyrifera_M_contig89253:13..136Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89253 14..136 +
1692278187.4325633-CDS-M-pyrifera_M_contig89253:13..1361692278187.4325633-CDS-M-pyrifera_M_contig89253:13..136Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89253 14..136 +
1622816802.4625576-CDS-M-pyrifera_M_contig89253:187..5091622816802.4625576-CDS-M-pyrifera_M_contig89253:187..509Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89253 188..509 +
1692278187.4532268-CDS-M-pyrifera_M_contig89253:187..5091692278187.4532268-CDS-M-pyrifera_M_contig89253:187..509Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89253 188..509 +
1622816802.4730828-CDS-M-pyrifera_M_contig89253:563..7931622816802.4730828-CDS-M-pyrifera_M_contig89253:563..793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89253 564..793 +
1692278187.4730425-CDS-M-pyrifera_M_contig89253:563..7931692278187.4730425-CDS-M-pyrifera_M_contig89253:563..793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89253 564..793 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89253.20683.1

>prot_M-pyrifera_M_contig89253.20683.1 ID=prot_M-pyrifera_M_contig89253.20683.1|Name=mRNA_M-pyrifera_M_contig89253.20683.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=225bp
MSLENTLWASTVLASDTVIGIVAYTGSETRSVINTSTPATKKGILDMEVN
HLTVVLCILQVLLGFVLVIGGLFKGVWWLNYFKFLILISSIIPISMRVNL
DFAKLVYSFSIVTDPDIPGCTVRNTSIPEELGRVSYLLSDKTGTLTQNDM
IFRKLHLGVANFSVDCIEDLKESLELAYRGPGEESSRVRVRNRDIVAQRV
NDTVHALALCHNVTPVIDDTAHIEE
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mRNA from alignment at M-pyrifera_M_contig89253:8..793+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89253.20683.1 ID=mRNA_M-pyrifera_M_contig89253.20683.1|Name=mRNA_M-pyrifera_M_contig89253.20683.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig89253:8..793+ (Macrocystis pyrifera P11B4 male)
GAAGCGATGAGCTTGGAGAACACTCTGTGGGCGAGCACTGTCCTTGCCAG CGACACGGTCATTGGCATTGTGGCATACACTGGCTCGGAGACGAGGAGTG TCATCAACACTAGCACACCTGCAACGAAGGTACGCCCTTTCTTCCTATTG CGCCGAGCGCTGCGCTAACGCACGTGGCAGAAGGGCATTCTGGACATGGA GGTAAACCATCTCACAGTAGTGCTGTGCATCTTACAAGTTCTGCTGGGAT TCGTGCTGGTTATCGGTGGGCTGTTCAAGGGCGTGTGGTGGCTCAACTAC TTCAAGTTCCTCATCCTCATCTCTTCCATCATCCCCATCAGCATGCGCGT GAACCTCGACTTTGCCAAGCTCGTCTATTCATTCTCCATCGTCACAGACC CCGACATTCCTGGCTGCACGGTGCGCAACACAAGCATACCCGAGGAGCTG GGCAGGGTCAGCTATTTGCTGTCAGATAAGACTGGCACTCTTACACAGAA TGGTAGGCTCTCGCAGGAAGGGGTACACGCAGTCACATCTCTGACGACTC TGGTAGACATGATCTTTCGCAAGCTGCACCTTGGCGTTGCGAACTTCAGC GTGGACTGCATCGAGGACCTGAAGGAGAGCCTCGAGCTCGCCTACCGCGG CCCTGGAGAGGAAAGCAGCAGAGTTAGGGTCAGGAACAGAGATATTGTGG CTCAGCGCGTCAACGACACTGTACACGCACTTGCTCTCTGTCACAACGTG ACCCCCGTGATAGACGACACAGCGCACATCGAGGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89253:8..793+

>mRNA_M-pyrifera_M_contig89253.20683.1 ID=mRNA_M-pyrifera_M_contig89253.20683.1|Name=mRNA_M-pyrifera_M_contig89253.20683.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1350bp|location=Sequence derived from alignment at M-pyrifera_M_contig89253:8..793+ (Macrocystis pyrifera P11B4 male)
ATGAGCTTGGAGAACACTCTGTGGGCGAGCACTGTCCTTGCCAGCGACAC
GGTCATTGGCATTGTGGCATACACTGGCTCGGAGACGAGGAGTGTCATCA
ACACTAGCACACCTGCAACGAAGATGAGCTTGGAGAACACTCTGTGGGCG
AGCACTGTCCTTGCCAGCGACACGGTCATTGGCATTGTGGCATACACTGG
CTCGGAGACGAGGAGTGTCATCAACACTAGCACACCTGCAACGAAGAAGG
GCATTCTGGACATGGAGGTAAACCATCTCACAGTAGTGCTGTGCATCTTA
CAAGTTCTGCTGGGATTCGTGCTGGTTATCGGTGGGCTGTTCAAGGGCGT
GTGGTGGCTCAACTACTTCAAGTTCCTCATCCTCATCTCTTCCATCATCC
CCATCAGCATGCGCGTGAACCTCGACTTTGCCAAGCTCGTCTATTCATTC
TCCATCGTCACAGACCCCGACATTCCTGGCTGCACGGTGCGCAACACAAG
CATACCCGAGGAGCTGGGCAGGGTCAGCTATTTGCTGTCAGATAAGACTG
GCACTCTTACACAGAATGAAGGGCATTCTGGACATGGAGGTAAACCATCT
CACAGTAGTGCTGTGCATCTTACAAGTTCTGCTGGGATTCGTGCTGGTTA
TCGGTGGGCTGTTCAAGGGCGTGTGGTGGCTCAACTACTTCAAGTTCCTC
ATCCTCATCTCTTCCATCATCCCCATCAGCATGCGCGTGAACCTCGACTT
TGCCAAGCTCGTCTATTCATTCTCCATCGTCACAGACCCCGACATTCCTG
GCTGCACGGTGCGCAACACAAGCATACCCGAGGAGCTGGGCAGGGTCAGC
TATTTGCTGTCAGATAAGACTGGCACTCTTACACAGAATGACATGATCTT
TCGCAAGCTGCACCTTGGCGTTGCGAACTTCAGCGTGGACTGCATCGAGG
ACCTGAAGGAGAGCCTCGAGCTCGCCTACCGCGGCCCTGGAGAGGAAAGC
AGCAGAGTTAGGGTCAGGAACAGAGATATTGTGGCTCAGCGCGTCAACGA
CACTGTACACGCACTTGCTCTCTGTCACAACGTGACCCCCGTGATAGACG
ACACAGCGCACATCGAGGAGACATGATCTTTCGCAAGCTGCACCTTGGCG
TTGCGAACTTCAGCGTGGACTGCATCGAGGACCTGAAGGAGAGCCTCGAG
CTCGCCTACCGCGGCCCTGGAGAGGAAAGCAGCAGAGTTAGGGTCAGGAA
CAGAGATATTGTGGCTCAGCGCGTCAACGACACTGTACACGCACTTGCTC
TCTGTCACAACGTGACCCCCGTGATAGACGACACAGCGCACATCGAGGAG
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