prot_M-pyrifera_M_contig8925.20682.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8925.20682.1
Unique Nameprot_M-pyrifera_M_contig8925.20682.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length208
Homology
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: D8LDH7_ECTSI (YihA6, YihA/EngB-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH7_ECTSI)

HSP 1 Score: 289 bits (740), Expect = 1.960e-93
Identity = 153/197 (77.66%), Postives = 164/197 (83.25%), Query Frame = 0
Query:   12 PAPPRAREGDAQDDAVKLSNAGKNPFKKEKIVSKFDVNDIRKIEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFGESVAKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAEDRENRPYKILMVATK 208
            P  PR R GD QDD      AG+NPFKKEKIVSKF  NDIRK+EFVGSY+D + +WP+TNLPEIAFLGRSNVGKSSMLNTLFGE VAKVSKTPGRTR+INIFKAKN   KDVCYFADLPGYGYAKMSKD QRTIE         F G MYL RRSNLKLL+LLADSRREPLASDAGVLEYAED+E+R YKIL+VATK
Sbjct:  222 PKAPRGRVGDPQDDQDGPGKAGRNPFKKEKIVSKFGANDIRKVEFVGSYDDKEEIWPRTNLPEIAFLGRSNVGKSSMLNTLFGEPVAKVSKTPGRTRKINIFKAKNGNDKDVCYFADLPGYGYAKMSKDKQRTIEK--------FLG-MYLERRSNLKLLILLADSRREPLASDAGVLEYAEDKEDRLYKILLVATK 409          
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: A0A836CAC1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC1_9STRA)

HSP 1 Score: 155 bits (392), Expect = 3.540e-44
Identity = 86/161 (53.42%), Postives = 113/161 (70.19%), Query Frame = 0
Query:   54 IEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFGESVAKV----SKTPGRTRQINIFKAKNSK--SKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAEDRENRPYKILMVATK 208
            +EF+GSY +D++ WP   +PE+AFLGRSNVGKSSMLN LFGE  AKV    SKTPGRT+ INIF A+     ++++C FADLPGYGYAK++K+  R IE       G      YL RR+ LKLL+LL D+RR+ L SDA +L++A D     +++L+VATK
Sbjct:    1 VEFIGSYAEDENAWPSEAVPEVAFLGRSNVGKSSMLNCLFGERAAKVRFVVSKTPGRTQLINIFSARGGAGGARELCRFADLPGYGYAKLAKEDMRAIE-------GFLM--QYLERRAQLKLLILLVDARRDALDSDAEILDFAADM-GVGFRVLVVATK 151          
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: A0A7R9YE62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE62_9STRA)

HSP 1 Score: 120 bits (300), Expect = 8.400e-31
Identity = 68/137 (49.64%), Postives = 87/137 (63.50%), Query Frame = 0
Query:   46 FDVNDIRKIEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFG--ESVAKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRRE 180
            F +++ + + F+G +  D    P T +PE+AF+GRSNVGKSS LN L G  ++VA VSKTPGRTRQIN+F+  N   K +C FADLPGYGYAK++K  QRTI               Y   R  L+L VLL DSRR+
Sbjct:   44 FSLDERKDVSFLGGFATD---LPSTEVPEVAFIGRSNVGKSSFLNALEGGNKAVAIVSKTPGRTRQINLFQVANKAGKPLCVFADLPGYGYAKLAKGRQRTISRSLR---------RYFEGRRQLQLAVLLGDSRRD 168          
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: A0A4D9CYN5_9STRA (EngB-type G domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYN5_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.130e-28
Identity = 78/165 (47.27%), Postives = 101/165 (61.21%), Query Frame = 0
Query:   46 FDVNDIRKIEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFG--ESVAKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAEDRENRPYKILMVATK 208
            F ++DI+ + F GS+ DD    P   LPE+A  GRSNVGKSS+LN L G  + VA VSKTPGRT+QIN+FK  +S    V    DLPGYGYAK+ K +Q  I A+            YL+ R  L+L VLL D+RREP  SD  +++Y     N P  +L++ATK
Sbjct:   64 FSIDDIQDVTFEGSHLDD---VPFLGLPEVAVFGRSNVGKSSLLNCLAGINKKVAVVSKTPGRTQQINLFKVHDSNG-PVSVLVDLPGYGYAKLPKALQSDIGAQVR---------RYLSDRPTLRLAVLLMDARREPQKSDLNMMKYFRAA-NVP--LLVLATK 212          
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: UPI000D69A2CF (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Occallatibacter savannae TaxID=1002691 RepID=UPI000D69A2CF)

HSP 1 Score: 114 bits (285), Expect = 2.830e-28
Identity = 72/142 (50.70%), Postives = 84/142 (59.15%), Query Frame = 0
Query:   67 WPQTNLPEIAFLGRSNVGKSSMLNTLFGESVAKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAEDRENRPYKILMVATK 208
            +P  ++PEIAFLGRSNVGKSS+LN L GE  AKVS TPGRTR IN F+  + K +     ADLPGYGYAK+SK    +I A  P          YLA R  LKL V L DS   P  SD  +LE+    E      L+VATK
Sbjct:   17 FPAPSVPEIAFLGRSNVGKSSLLNALVGEKAAKVSSTPGRTRAINFFQLVDDKGRPQVVLADLPGYGYAKISK----SISAEWPKFIE-----PYLAERETLKLCVCLVDSNIPPQQSDGKLLEWLRHVER---DFLVVATK 146          
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: A0A2N1VMX9_9BACT (Probable GTP-binding protein EngB n=2 Tax=Bacteria TaxID=2 RepID=A0A2N1VMX9_9BACT)

HSP 1 Score: 114 bits (284), Expect = 4.090e-28
Identity = 62/129 (48.06%), Postives = 88/129 (68.22%), Query Frame = 0
Query:   67 WPQTNLPEIAFLGRSNVGKSSMLNTL-FGESVAKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAED 194
            +P+TNLPE+AF GRSNVGKSS++N++   +++A +S +PG+TRQIN FK +N  S     FADLPG+GYA++SKD++      N           YLA R NLKL+V L DSR +P  +D G++E+ E+
Sbjct:   18 FPKTNLPELAFSGRSNVGKSSLINSIVLQKNLALISSSPGKTRQINFFKVENKWS-----FADLPGFGYAQVSKDLREQWRKLNMD---------YLANRDNLKLIVALVDSRHDPSETDLGLIEWYEN 132          
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: W7U6M2_9STRA (Ribosome biogenesis gtp-binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6M2_9STRA)

HSP 1 Score: 117 bits (294), Expect = 7.420e-28
Identity = 78/165 (47.27%), Postives = 101/165 (61.21%), Query Frame = 0
Query:   46 FDVNDIRKIEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFG--ESVAKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAEDRENRPYKILMVATK 208
            F ++DI+ + F GS+ DD    P   LPE+A  GRSNVGKSS+LN L G  + VA VSKTPGRT+QIN+FK  +S    V    DLPGYGYAK+ K +Q  I A+            YL+ R  L+L VLL D+RREP  SD  +++Y     N P  +L++ATK
Sbjct:  170 FSIDDIQDVTFEGSHLDD---VPFLGLPEVAVFGRSNVGKSSLLNCLAGINKKVAVVSKTPGRTQQINLFKVHDSNG-PVSVLVDLPGYGYAKLPKALQSDIGAQVR---------RYLSDRPTLRLAVLLMDARREPQKSDLNMMKYFRAA-NIP--LLVLATK 318          
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: A0A482SYH7_9ARCH (Ribosome biogenesis GTP-binding protein YsxC (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SYH7_9ARCH)

HSP 1 Score: 114 bits (284), Expect = 1.470e-27
Identity = 66/147 (44.90%), Postives = 92/147 (62.59%), Query Frame = 0
Query:   46 FDVNDIRKIEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFGES--VAKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLE 190
            F ++  ++ EF+GSY + D + P   +PE+AF+GRSNVGKSS+LN + G S  +A  SK PGRT+ IN+FK K+  S D+C F DLPGYG+AK+ K+ QR I               YL  R+ LKL V++ D+RR    SD  ++E
Sbjct:  104 FKLDSKKEFEFIGSYTNADQI-PIYPIPEVAFVGRSNVGKSSLLNCISGASKNIAVESKIPGRTQCINLFKCKDM-SGDICIFTDLPGYGFAKLGKEQQRDIST---------FVNKYLVGRAALKLTVVIVDARRGQQESDTSMME 239          
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: A0A7S2DD64_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DD64_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.970e-27
Identity = 76/165 (46.06%), Postives = 102/165 (61.82%), Query Frame = 0
Query:   46 FDVNDIRKIEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFG--ESVAKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAEDRENRPYKILMVATK 208
            F V   + +EF G Y  +D   P   LPEIAF+GRSNVGKSS+LN L G     A VSKTPGRTR+INIF+ ++ +   +C   DLPGYG+A+++++++++I        G F    YLA RS L+L VLL DSRR  + SDA +    E     PY  ++VATK
Sbjct:   68 FQVKSTKLVEFEGGYGIND--LPSIALPEIAFVGRSNVGKSSLLNCLAGPGRKPAVVSKTPGRTRRINIFRVRDDQG-PLCALVDLPGYGFAQITEEVRKSI--------GSFMD-QYLATRSELQLAVLLIDSRRGVMDSDAEMASTLEAG-GTPY--VVVATK 217          
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Match: A0A1Z5J9R8_FISSO (EngB-type G domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9R8_FISSO)

HSP 1 Score: 116 bits (290), Expect = 4.170e-27
Identity = 71/163 (43.56%), Postives = 92/163 (56.44%), Query Frame = 0
Query:   51 IRKIEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFGESV-----AKVSKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNPIAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAEDRENRPYKILMVATK 208
            I  ++ VGSY DD  + P+  +PE+AFLGRSNVGKSS+LN L   +V     A+V KTPG T  +N++   N K KD+  F DLPG+G+AK+SKD +  +EA             YL +R  L L +LL D RR P   D  VL    D       I +VATK
Sbjct:  105 IMGMKMVGSYLDDRQLPPRLGVPEVAFLGRSNVGKSSLLNRLTASAVQSSTKARVGKTPGATASVNLYSLYNRKEKDLLGFVDLPGFGFAKLSKDTKAAVEA---------AAENYLGKRKELMLGILLVDIRRTPSEDDRAVLAALFDM---GVPIAVVATK 255          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8925.20682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDH7_ECTSI1.960e-9377.66YihA6, YihA/EngB-like GTPase n=1 Tax=Ectocarpus si... [more]
A0A836CAC1_9STRA3.540e-4453.42P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7R9YE62_9STRA8.400e-3149.64Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A4D9CYN5_9STRA1.130e-2847.27EngB-type G domain-containing protein n=1 Tax=Nann... [more]
UPI000D69A2CF2.830e-2850.70ribosome biogenesis GTP-binding protein YihA/YsxC ... [more]
A0A2N1VMX9_9BACT4.090e-2848.06Probable GTP-binding protein EngB n=2 Tax=Bacteria... [more]
W7U6M2_9STRA7.420e-2847.27Ribosome biogenesis gtp-binding protein n=1 Tax=Na... [more]
A0A482SYH7_9ARCH1.470e-2744.90Ribosome biogenesis GTP-binding protein YsxC (Frag... [more]
A0A7S2DD64_9STRA3.970e-2746.06Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A1Z5J9R8_FISSO4.170e-2743.56EngB-type G domain-containing protein n=1 Tax=Fist... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 74..200
e-value: 2.3E-18
score: 66.3
NoneNo IPR availableGENE3D3.40.50.300coord: 48..208
e-value: 3.5E-29
score: 103.6
NoneNo IPR availablePANTHERPTHR11649MSS1/TRME-RELATED GTP-BINDING PROTEINcoord: 26..203
NoneNo IPR availablePANTHERPTHR11649:SF13GTP-BINDING PROTEIN ENGB-RELATEDcoord: 26..203
IPR019987GTP-binding protein, ribosome biogenesis, YsxCTIGRFAMTIGR03598TIGR03598coord: 55..207
e-value: 2.2E-38
score: 129.8
IPR030393EngB-type guanine nucleotide-binding (G) domainPROSITEPS51706G_ENGBcoord: 71..208
score: 27.172
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 67..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8925contigM-pyrifera_M_contig8925:149..5140 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8925.20682.1mRNA_M-pyrifera_M_contig8925.20682.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8925 149..5140 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8925.20682.1 ID=prot_M-pyrifera_M_contig8925.20682.1|Name=mRNA_M-pyrifera_M_contig8925.20682.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=208bp
QERAKRREATKPAPPRAREGDAQDDAVKLSNAGKNPFKKEKIVSKFDVND
IRKIEFVGSYEDDDSVWPQTNLPEIAFLGRSNVGKSSMLNTLFGESVAKV
SKTPGRTRQINIFKAKNSKSKDVCYFADLPGYGYAKMSKDMQRTIEARNP
IAFGIFCGGMYLARRSNLKLLVLLADSRREPLASDAGVLEYAEDRENRPY
KILMVATK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR019987GTP-bd_ribosome_bio_YsxC
IPR030393G_ENGB_dom
IPR027417P-loop_NTPase