prot_M-pyrifera_M_contig89203.20677.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig89203.20677.1
Unique Nameprot_M-pyrifera_M_contig89203.20677.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length122
Homology
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BLAST of mRNA_M-pyrifera_M_contig89203.20677.1 vs. uniprot
Match: F2TZB6_SALR5 (JmjC domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TZB6_SALR5)

HSP 1 Score: 67.0 bits (162), Expect = 1.730e-10
Identity = 45/138 (32.61%), Postives = 65/138 (47.10%), Query Frame = 0 
Query:    1 VRAGLVPYASTYAGAEMNATTMDLGDYITSYLLNPNPNP-----------TLTPPLYVFDNEVLTKSFVVANSLPIPSFNTSIRQFI-----IGPKDSGAMPHIHDGAWNILFLGRKLWVITPPSCAEFALLPASEWF 122
            V    VPYASTY  +  +  TM L  ++  ++   N +            T    +YVFD  VL +   + +S+ +P   +S  Q +     +GP  SGA PH H  A N+L  GRK W + PP  A F ++ A  WF
Sbjct:  382 VSVAAVPYASTYGHSTTH--TMPLRTFVQQHMGYSNNHHQXXXXQAQDCRTTDTCMYVFDGSVLHRHPEMLHSIGLPFVVSSTEQLVLAQLMVGPTGSGAPPHFHGQAINVLVQGRKQWQLFPPQHAFFHMVTAHAWF 517
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89203.20677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
F2TZB6_SALR51.730e-1032.61JmjC domain-containing protein n=1 Tax=Salpingoeca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.650coord: 2..121
e-value: 6.6E-8
score: 34.1
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 18..113
IPR003347JmjC domainPROSITEPS51184JMJCcoord: 32..122
score: 11.385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89203contigM-pyrifera_M_contig89203:5..370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89203.20677.1mRNA_M-pyrifera_M_contig89203.20677.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig89203 5..370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig89203.20677.1 ID=prot_M-pyrifera_M_contig89203.20677.1|Name=mRNA_M-pyrifera_M_contig89203.20677.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=122bp
VRAGLVPYASTYAGAEMNATTMDLGDYITSYLLNPNPNPTLTPPLYVFDN
EVLTKSFVVANSLPIPSFNTSIRQFIIGPKDSGAMPHIHDGAWNILFLGR
KLWVITPPSCAEFALLPASEWF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003347JmjC_dom