prot_M-pyrifera_M_contig109902.2067.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig109902.2067.1
Unique Nameprot_M-pyrifera_M_contig109902.2067.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length133
Homology
BLAST of mRNA_M-pyrifera_M_contig109902.2067.1 vs. uniprot
Match: A0A2D8IS05_9GAMM (Integrase n=2 Tax=Haliea TaxID=475794 RepID=A0A2D8IS05_9GAMM)

HSP 1 Score: 271 bits (694), Expect = 3.250e-88
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
Query:    1 MKGGRDHKVPLCHEAVDLLKSLPRDHDSEVIFVSPTGKMLSNMTLTKVLKDMGHQVTQHGFRATFRTWAQEHTSYPEEVCELALAHVNSDATRAAYARSELIEKRRKLMADWERFCREGLPSKGKENKIRAR 132
            MKGGRDHKVPLCHEAVDLLKSLPRDHDSEVIFVSPTGKMLSNMTLTKVLKDMGHQVTQHGFRATFRTWAQEHTSYPEEVCELALAHVNSDATRAAYARSELIEKRRKLMADWERFCREGLPSKGKENKIRAR
Sbjct:  298 MKGGRDHKVPLCHEAVDLLKSLPRDHDSEVIFVSPTGKMLSNMTLTKVLKDMGHQVTQHGFRATFRTWAQEHTSYPEEVCELALAHVNSDATRAAYARSELIEKRRKLMADWERFCREGLPSKGKENKIRAR 429          
BLAST of mRNA_M-pyrifera_M_contig109902.2067.1 vs. uniprot
Match: A0A2E3P3L8_9PROT (Integrase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2E3P3L8_9PROT)

HSP 1 Score: 247 bits (631), Expect = 1.180e-78
Identity = 119/132 (90.15%), Postives = 123/132 (93.18%), Query Frame = 0
Query:    1 MKGGRDHKVPLCHEAVDLLKSLPRDHDSEVIFVSPTGKMLSNMTLTKVLKDMGHQVTQHGFRATFRTWAQEHTSYPEEVCELALAHVNSDATRAAYARSELIEKRRKLMADWERFCREGLPSKGKENKIRAR 132
            MKGGRDHKVPLC EAVDLLKSLPRDHDS +IFVSPTGKMLSNMTLTKVLKDMGHQVTQHGFRATFRTWAQEHT+YPEEVCELALAHVNSDATR AYARSELI+KRRKLMADWERFCREGLP+  K   IR R
Sbjct:  298 MKGGRDHKVPLCREAVDLLKSLPRDHDSNLIFVSPTGKMLSNMTLTKVLKDMGHQVTQHGFRATFRTWAQEHTTYPEEVCELALAHVNSDATRVAYARSELIDKRRKLMADWERFCREGLPATAKMKSIRGR 429          
BLAST of mRNA_M-pyrifera_M_contig109902.2067.1 vs. uniprot
Match: A0A2N5Y2N9_9GAMM (Integrase n=2 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y2N9_9GAMM)

HSP 1 Score: 185 bits (469), Expect = 2.370e-54
Identity = 88/129 (68.22%), Postives = 107/129 (82.95%), Query Frame = 0
Query:    1 MKGGRDHKVPLCHEAVDLLKSLPRDHDSEVIFVSPTGKMLSNMTLTKVLKDMGHQVTQHGFRATFRTWAQEHTSYPEEVCELALAHVNSDATRAAYARSELIEKRRKLMADWERFCREGLPSKGKENKI 129
            MK G+ HKVPLC+ A+D+LK+LPRDHD  +IF +  G  LS++TL KV KDMGH VTQHGFR++FRTWAQEHT+Y +EVCELALAHVNSDA+RAAYARSELI+KRR LM DWE+FC+ GLP    +N +
Sbjct:  304 MKEGKSHKVPLCNAAIDILKALPRDHD--LIFPNRNGDRLSDVTLVKVAKDMGHAVTQHGFRSSFRTWAQEHTTYADEVCELALAHVNSDASRAAYARSELIDKRRLLMNDWEQFCKYGLPEDTGDNVV 430          
BLAST of mRNA_M-pyrifera_M_contig109902.2067.1 vs. uniprot
Match: A0A356VJ65_9GAMM (Integrase n=2 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A356VJ65_9GAMM)

HSP 1 Score: 181 bits (460), Expect = 3.090e-53
Identity = 90/129 (69.77%), Postives = 107/129 (82.95%), Query Frame = 0
Query:    1 MKGGRDHKVPLCHEAVDLLKSLPRDHDSEVIFVSPTGKMLSNMTLTKVLKDMGHQVTQHGFRATFRTWAQEHTSYPEEVCELALAHVNSDATRAAYARSELIEKRRKLMADWERFCREGLPSKGKENKI 129
            MKGGR HKVPLC  AV LL+SL RD  SE +F +  G  LS+++++KV K +GH VT HGFRATFRTWAQEHT+Y +EVCELALAHVNSD+TRAAYARSEL++KRR LM DWERFCREGLP++GK  +I
Sbjct:  284 MKGGRAHKVPLCTSAVSLLESLSRD--SEYLFHNTKGGPLSDVSVSKVPKQLGHDVTVHGFRATFRTWAQEHTNYRDEVCELALAHVNSDSTRAAYARSELLDKRRLLMQDWERFCREGLPARGKVIRI 410          
BLAST of mRNA_M-pyrifera_M_contig109902.2067.1 vs. uniprot
Match: UPI001D11FC59 (site-specific integrase n=2 Tax=Marinobacter zhanjiangensis TaxID=578215 RepID=UPI001D11FC59)

HSP 1 Score: 151 bits (382), Expect = 1.840e-42
Identity = 73/129 (56.59%), Postives = 93/129 (72.09%), Query Frame = 0
Query:    1 MKGGRDHKVPLCHEAVDLLKSLPRDHDSEVIFVSPTGKMLSNMTLTKVLKDMGHQVTQHGFRATFRTWAQEHTSYPEEVCELALAHVNSDATRAAYARSELIEKRRKLMADWERFCREGLPSKGKENKI 129
            MK G+ H+VPL   A+DLLK + +    +++F  P G + SN  L+ +LK M   VT HGFR+TF+ WA+EHT+YP+EV ELALAHVNSDATRAAYARSELI+KRR LMADWE++C  G   K    K+
Sbjct:  192 MKSGKLHRVPLTDTAIDLLKGMEQGKPEDLVFPGPKGDVPSNNFLSALLKRMDQPVTSHGFRSTFKDWAREHTAYPDEVSELALAHVNSDATRAAYARSELIDKRRLLMADWEQYCYHGEAQKDDSGKV 320          
BLAST of mRNA_M-pyrifera_M_contig109902.2067.1 vs. uniprot
Match: A0A2A2F910_9GAMM (Integrase n=1 Tax=Halovibrio salipaludis TaxID=2032626 RepID=A0A2A2F910_9GAMM)

HSP 1 Score: 153 bits (386), Expect = 4.060e-42
Identity = 73/121 (60.33%), Postives = 93/121 (76.86%), Query Frame = 0
Query:    1 MKGGRDHKVPLCHEAVDLLKSLPRDHDSEVIFVSPTGKMLSNMTLTKVLKDMGHQVTQHGFRATFRTWAQEHTSYPEEVCELALAHVNSDATRAAYARSELIEKRRKLMADWERFCREGLP 121
            MK G++H +PLC EAV +L+S+P+    +++F  P G + SN  L+ +LK M   VT HGFR+TF+ WA++HT Y +EV ELALAHVN+DATRAAYARS LIEKRR+LM DWERF REGLP
Sbjct:  296 MKTGKEHTIPLCDEAVAILQSVPQGGPDDLVFAGPKGDIPSNNFLSSLLKRMEVPVTAHGFRSTFKDWARKHTGYADEVSELALAHVNTDATRAAYARSGLIEKRRQLMGDWERFTREGLP 416          
BLAST of mRNA_M-pyrifera_M_contig109902.2067.1 vs. uniprot
Match: A0A142FLK0_9GAMM (Integrase n=1 Tax=Marinobacter sp. LQ44 TaxID=1749259 RepID=A0A142FLK0_9GAMM)

HSP 1 Score: 151 bits (381), Expect = 2.250e-41
Identity = 74/131 (56.49%), Postives = 96/131 (73.28%), Query Frame = 0
Query:    1 MKGGRDHKVPLCHEAVDLLKSLPRDHDSEVIFVSPTGKMLSNMTLTKVLKDMGHQVTQHGFRATFRTWAQEHTSYPEEVCELALAHVNSDATRAAYARSELIEKRRKLMADWERFCREGLPSKGKENKIRA 131
            MK G++H+VPL + A+DLLK + +    ++IF  P G + SN  L+ +LK M   VT HGFR+TF+ WA+EHT+Y +EV ELALAHVNSDATRAAYARSELI+KRR LMADWE++C  G   K +  K+ A
Sbjct:  296 MKSGKEHRVPLTNAAMDLLKGMEQGKPDDLIFPGPKGDIPSNNFLSALLKRMDQPVTAHGFRSTFKDWAREHTAYADEVSELALAHVNSDATRAAYARSELIDKRRLLMADWEQYCYHGKAKKEEGGKVVA 426          
BLAST of mRNA_M-pyrifera_M_contig109902.2067.1 vs. uniprot
Match: UPI0019D41D81 (site-specific integrase n=1 Tax=Marinobacter sp. LPB0319 TaxID=2769486 RepID=UPI0019D41D81)

HSP 1 Score: 149 bits (376), Expect = 1.220e-40
Identity = 77/127 (60.63%), Postives = 95/127 (74.80%), Query Frame = 0
Query:    1 MKGGRDHKVPLCHEAVDLLKSLPRDHDSEVIFVSPTGKMLSNMTLTKVLKDMGHQVTQHGFRATFRTWAQEHTSYPEEVCELALAHVNSDATRAAYARSELIEKRRKLMADWERFCREGLPSKGKEN 127
            MK G++H+VPL   AV+LLK +P    +++IF  P G + SN  LT +LK M  + T HGFR+TF+ WA+E TSY +EV ELALAHVNSDATRAAYARSELI+KRR LMADWE+FC EG   K +EN
Sbjct:  297 MKSGKEHRVPLSETAVNLLKDMPPGEPNQLIFPGPKGDIPSNNFLTALLKRMEIESTIHGFRSTFKDWARECTSYADEVSELALAHVNSDATRAAYARSELIDKRRLLMADWEKFCTEG--EKAQEN 421          
BLAST of mRNA_M-pyrifera_M_contig109902.2067.1 vs. uniprot
Match: UPI001C2D34AD (site-specific integrase n=1 Tax=Marinobacterium ramblicola TaxID=2849041 RepID=UPI001C2D34AD)

HSP 1 Score: 147 bits (371), Expect = 5.840e-40
Identity = 73/120 (60.83%), Postives = 93/120 (77.50%), Query Frame = 0
Query:    1 MKGGRDHKVPLCHEAVDLLKSLPRDHDSEVIFVSPT-GKMLSNMTLTKVLKDMGHQVTQHGFRATFRTWAQEHTSYPEEVCELALAHVNSDATRAAYARSELIEKRRKLMADWERFCREG 119
            MKGG+ HK+PL   AV L+++ PR   SE +F  P  G+ ++++ ++KV K +GH VT HGFR+TFRTWAQE+TSY EE+CELALAHVNSDATRAAYAR EL++KRR LM+DWE F   G
Sbjct:  290 MKGGKAHKIPLTASAVKLVEAQPRL--SEYVFAGPRKGRPITDVAVSKVPKLLGHDVTAHGFRSTFRTWAQEYTSYAEEICELALAHVNSDATRAAYARGELVDKRRLLMSDWEHFILNG 407          
BLAST of mRNA_M-pyrifera_M_contig109902.2067.1 vs. uniprot
Match: A0A6N7M0Z7_9GAMM (DUF4102 domain-containing protein n=1 Tax=Alcanivorax sediminis TaxID=2663008 RepID=A0A6N7M0Z7_9GAMM)

HSP 1 Score: 147 bits (370), Expect = 6.590e-40
Identity = 70/116 (60.34%), Postives = 89/116 (76.72%), Query Frame = 0
Query:    1 MKGGRDHKVPLCHEAVDLLKSLPRDHDSEVIFVSPTGKMLSNMTLTKVLKDMGHQVTQHGFRATFRTWAQEHTSYPEEVCELALAHVNSDATRAAYARSELIEKRRKLMADWERFC 116
            MK G+ HKVPLC +AV++L+ +PR   S+ IF +P G   S++ LT +LK M  + T HGFR+TF+ WA+E TSY +EV ELALAHVNSDATRAAYARSELI+KRR+LMA+W  F 
Sbjct:  289 MKAGKPHKVPLCPDAVEILREIPRFEGSDFIFTAPRGGKFSDVALTALLKRMDIKATAHGFRSTFKDWAREQTSYADEVSELALAHVNSDATRAAYARSELIDKRRQLMAEWAAFA 404          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109902.2067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8IS05_9GAMM3.250e-88100.00Integrase n=2 Tax=Haliea TaxID=475794 RepID=A0A2D8... [more]
A0A2E3P3L8_9PROT1.180e-7890.15Integrase n=2 Tax=Proteobacteria TaxID=1224 RepID=... [more]
A0A2N5Y2N9_9GAMM2.370e-5468.22Integrase n=2 Tax=Kineobactrum sediminis TaxID=190... [more]
A0A356VJ65_9GAMM3.090e-5369.77Integrase n=2 Tax=Halieaceae bacterium TaxID=20267... [more]
UPI001D11FC591.840e-4256.59site-specific integrase n=2 Tax=Marinobacter zhanj... [more]
A0A2A2F910_9GAMM4.060e-4260.33Integrase n=1 Tax=Halovibrio salipaludis TaxID=203... [more]
A0A142FLK0_9GAMM2.250e-4156.49Integrase n=1 Tax=Marinobacter sp. LQ44 TaxID=1749... [more]
UPI0019D41D811.220e-4060.63site-specific integrase n=1 Tax=Marinobacter sp. L... [more]
UPI001C2D34AD5.840e-4060.83site-specific integrase n=1 Tax=Marinobacterium ra... [more]
A0A6N7M0Z7_9GAMM6.590e-4060.34DUF4102 domain-containing protein n=1 Tax=Alcanivo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10coord: 1..115
e-value: 4.8E-12
score: 47.7
IPR002104Integrase, catalytic domainPFAMPF00589Phage_integrasecoord: 1..99
e-value: 4.3E-7
score: 29.9
NoneNo IPR availablePANTHERPTHR30629PROPHAGE INTEGRASEcoord: 1..118
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 1..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig109902contigM-pyrifera_M_contig109902:182..580 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig109902.2067.1mRNA_M-pyrifera_M_contig109902.2067.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig109902 182..601 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig109902.2067.1 ID=prot_M-pyrifera_M_contig109902.2067.1|Name=mRNA_M-pyrifera_M_contig109902.2067.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp
MKGGRDHKVPLCHEAVDLLKSLPRDHDSEVIFVSPTGKMLSNMTLTKVLK
DMGHQVTQHGFRATFRTWAQEHTSYPEEVCELALAHVNSDATRAAYARSE
LIEKRRKLMADWERFCREGLPSKGKENKIRAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat_sf
IPR002104Integrase_catalytic
IPR011010DNA_brk_join_enz