mRNA_M-pyrifera_M_contig109898.2066.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109898.2066.1 vs. uniprot
Match: A0A7Y2IIH1_9ACTN (DUF4214 domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IIH1_9ACTN) HSP 1 Score: 102 bits (255), Expect = 4.440e-24 Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 1 RLYRAFLDREPDVAGGKYWIAEARNGADPDDLAFGFARSREFTTRYGTLSNREFLELLYENMLARQADQAGFDYWWQKMESAELSQHGVVRWIVANDEF 297
RLY AF DRE + G YWI +G D ++ FA S EF YG++ NR +LE+LY+N+L RQ D GF+YW ++S +L++ VVRW+ ANDEF
Sbjct: 236 RLYLAFFDREAGINGANYWIGVNAHGYSIDAISGQFAVSDEFINTYGSVDNRRYLEILYQNVLGRQPDAKGFNYWLGLLDSGQLNRGSVVRWVAANDEF 334
BLAST of mRNA_M-pyrifera_M_contig109898.2066.1 vs. uniprot
Match: A0A7Y2IHD0_9ACTN (DUF4214 domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IHD0_9ACTN) HSP 1 Score: 103 bits (258), Expect = 8.160e-24 Identity = 53/103 (51.46%), Postives = 69/103 (66.99%), Query Frame = 1
Query: 1 RLYRAFLDREPDVAGGKYWIAEARNGADPDDLAFGFARSREFTTRYGTLSNREFLELLYENMLARQADQAGFDYWWQKMESAELSQHGVVRWIVANDEFFARY 309
RLYRAFL+REPD +G +YWI GA D +A FA S+EFT YG LSN+EFLE++Y+N+L R+AD +G YW ++ L + VRWI A+ EF A Y
Sbjct: 68 RLYRAFLNREPDASGAQYWITVGE-GASLDAIAEQFAISQEFTETYGDLSNQEFLEVVYQNVLGRRADSSGLQYWLALVDDG-LERSRAVRWITASGEFRAAY 168
BLAST of mRNA_M-pyrifera_M_contig109898.2066.1 vs. uniprot
Match: A0A7Y2GRJ4_9ACTN (DUF4214 domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GRJ4_9ACTN) HSP 1 Score: 99.4 bits (246), Expect = 8.060e-23 Identity = 44/99 (44.44%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 1 RLYRAFLDREPDVAGGKYWIAEARNGADPDDLAFGFARSREFTTRYGTLSNREFLELLYENMLARQADQAGFDYWWQKMESAELSQHGVVRWIVANDEF 297
RLY AF +R+ ++AG YWI G D ++ FA S+EF YG++ N +L++LY+N+L RQ DQAGFDYW + + +L + GVVRW+ + EF
Sbjct: 228 RLYLAFFNRQAEIAGANYWIGLNATGVSIDRISAEFAVSQEFQNTYGSVDNEGYLQILYQNVLGRQPDQAGFDYWLGLLNNGDLDRGGVVRWVANDVEF 326
BLAST of mRNA_M-pyrifera_M_contig109898.2066.1 vs. uniprot
Match: A0A7Y2IGB7_9ACTN (DUF4214 domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IGB7_9ACTN) HSP 1 Score: 97.8 bits (242), Expect = 1.330e-21 Identity = 44/103 (42.72%), Postives = 64/103 (62.14%), Query Frame = 1
Query: 1 RLYRAFLDREPDVAGGKYWIAEARNGADPDDLAFGFARSREFTTRYGTLSNREFLELLYENMLARQADQAGFDYWWQKMESAELSQHGVVRWIVANDEFFARY 309
RLY AF +R+PD++G +YWI +GA D +AF F+ S EF YG S+R+F+ ++Y N+L RQ D +GF YW + ++ VVRWI + EF A +
Sbjct: 84 RLYWAFFERDPDLSGARYWIDVFNDGASIDAIAFAFSSSAEFRQTYGATSDRDFVRIVYANVLGRQPDSSGFAYWTGLLRETPATRVDVVRWISGSTEFIAAH 186
BLAST of mRNA_M-pyrifera_M_contig109898.2066.1 vs. uniprot
Match: A0A7Y2IJ36_9ACTN (DUF4214 domain-containing protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IJ36_9ACTN) HSP 1 Score: 92.8 bits (229), Expect = 6.830e-20 Identity = 47/113 (41.59%), Postives = 64/113 (56.64%), Query Frame = 1
Query: 1 RLYRAFLDREPDVAGGKYWIAEARNGADPDDLAFGFARSREFTTRYGTLSNREFLELLYENMLARQADQAGFDYWWQKMES----------AELSQHGVVRWIVANDEFFARY 309
RLYRAF DREP+++G KYW+ +G ++A F S EF Y +N E+L +Y N+L R DQAGF+YW ++ A LS+ +VRWI A EF A+Y
Sbjct: 74 RLYRAFFDREPELSGAKYWLGVRESGHSLTNIAGYFTLSDEFANNYDGTNNEEYLRRVYPNVLGRDYDQAGFNYWLDLLQGTNTGGGNDSLATLSRGALVRWITAGAEFKAQY 186
BLAST of mRNA_M-pyrifera_M_contig109898.2066.1 vs. uniprot
Match: A0A7X7D7W9_9ACTN (DUF4214 domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7D7W9_9ACTN) HSP 1 Score: 89.0 bits (219), Expect = 1.490e-18 Identity = 42/99 (42.42%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 1 RLYRAFLDREPDVAGGKYWIAEARNGADPDDLAFGFARSREFTTRYGTLSNREFLELLYENMLARQADQAGFDYWWQKMESAELSQHGVVRWIVANDEF 297
RLY A+ R PD +G KYW+ + RN DD++ FA+S EF RYG+L N EF++L+YEN+LAR+ D AG+ +W +++ + S+ V+R + + E+
Sbjct: 309 RLYSAYFLRRPDTSGLKYWVGKVRNQTSLDDISEEFAQSTEFKDRYGSLGNAEFVKLVYENVLAREPDNAGYLHWTYRLDHGK-SRGWVMRQMCESPEY 406
BLAST of mRNA_M-pyrifera_M_contig109898.2066.1 vs. uniprot
Match: A0A2E3IM79_9PROT (P/Homo B domain-containing protein n=1 Tax=Geminicoccus sp. TaxID=2024832 RepID=A0A2E3IM79_9PROT) HSP 1 Score: 88.6 bits (218), Expect = 2.510e-18 Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 1
Query: 1 RLYRAFLDREPDVAGGKYWIAEARNGADPDDLAFGFARSREFTTRYGTLSNREFLELLYENMLARQADQAGFDYWWQKMESAELSQHGVVRWIVANDEFFA 303
R+Y+A LDREPD G +YW E +G D+ F S EFT++YG +N EF+ LLY+N+L R+ DQ G+DYW +++S ++ VV +DEF A
Sbjct: 788 RIYQATLDREPDQEGFEYWTDELSSGQSVSDVISSFLSSPEFTSKYGDTTNGEFVTLLYQNVLDREPDQGGYDYWVGELDSG-TTRDDVVVGFAESDEFKA 887
BLAST of mRNA_M-pyrifera_M_contig109898.2066.1 vs. uniprot
Match: A0A349AZN9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349AZN9_9ACTN) HSP 1 Score: 85.9 bits (211), Expect = 1.470e-17 Identity = 45/99 (45.45%), Postives = 58/99 (58.59%), Query Frame = 1
Query: 1 RLYRAFLDREPDVAGGKYWIAEARNGADPDDLAFGFARSREFTTRYGTLSNREFLELLYENMLARQADQAGFDYWWQKMESAELSQHGVVRWIVANDEF 297
RLYRA+ REPD G YW G D ++ FARS EF RYG++ NR FLEL+Y N+L R DQ+G+DYW +M L V+ + +DEF
Sbjct: 48 RLYRAYFLREPDADGFAYWNGVYAMGYPLDKISNDFARSDEFQQRYGSVDNRRFLELVYHNVLGRDPDQSGYDYWLDQMNRGMLRGF-VMIYFSDSDEF 145
BLAST of mRNA_M-pyrifera_M_contig109898.2066.1 vs. uniprot
Match: UPI001FB225DE (DUF4214 domain-containing protein n=1 Tax=Orrella sp. f23 TaxID=2782176 RepID=UPI001FB225DE) HSP 1 Score: 85.5 bits (210), Expect = 2.940e-17 Identity = 47/102 (46.08%), Postives = 63/102 (61.76%), Query Frame = 1
Query: 1 RLYRAFLDREPDVAGGKYWIAEARNGADPDDLAFGFARSREFTTRYGTLSNRE-FLELLYENMLARQADQAGFDYWWQKMESAELSQHGVVRWIVANDEFFA 303
R+Y+A DR PD +G YWIA+ GA +A GF +S EF TRYG S+ E F++LLY N+L RQ DQ+G+DYW M S LS+ V+ + + E A
Sbjct: 541 RIYQAAFDRAPDTSGLGYWIAQMDQGASLSSVAMGFVQSLEFETRYGASSSDEQFVDLLYANVLDRQPDQSGYDYWIDVM-SKGLSRADVLAYFSESAENIA 641
BLAST of mRNA_M-pyrifera_M_contig109898.2066.1 vs. uniprot
Match: A0A7Y2IKT8_9ACTN (DUF4214 domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IKT8_9ACTN) HSP 1 Score: 82.8 bits (203), Expect = 2.410e-16 Identity = 41/113 (36.28%), Postives = 63/113 (55.75%), Query Frame = 1
Query: 1 RLYRAFLDREPDVAGGKYWIAEARNGADPDDLAFGFARSREFTTRYGTLSNREFLELLYENMLARQADQAGFDYWWQKMESA----------ELSQHGVVRWIVANDEFFARY 309
RLY+A+ DR+PD+AG KYW+ R G +A A S+EF Y ++S+ +L +Y+NML R AD++G++YW + +LS+ VV ++ A EF Y
Sbjct: 70 RLYQAYFDRQPDLAGAKYWLGVRRQGHRQLAIAKFMAASQEFANNYQSVSDEVYLTRVYQNMLGRDADESGYNYWLDAVRGTNEFGGNPNRTDLSRGEVVFYVTAGQEFIRNY 182 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109898.2066.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109898.2066.1 >prot_M-pyrifera_M_contig109898.2066.1 ID=prot_M-pyrifera_M_contig109898.2066.1|Name=mRNA_M-pyrifera_M_contig109898.2066.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp RLYRAFLDREPDVAGGKYWIAEARNGADPDDLAFGFARSREFTTRYGTLSback to top mRNA from alignment at M-pyrifera_M_contig109898:17..325+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109898.2066.1 ID=mRNA_M-pyrifera_M_contig109898.2066.1|Name=mRNA_M-pyrifera_M_contig109898.2066.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=309bp|location=Sequence derived from alignment at M-pyrifera_M_contig109898:17..325+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109898:17..325+ >mRNA_M-pyrifera_M_contig109898.2066.1 ID=mRNA_M-pyrifera_M_contig109898.2066.1|Name=mRNA_M-pyrifera_M_contig109898.2066.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig109898:17..325+ (Macrocystis pyrifera P11B4 male)back to top |