prot_M-pyrifera_M_contig89057.20646.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig89057.20646.1
Unique Nameprot_M-pyrifera_M_contig89057.20646.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length140
Homology
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: UPI000F819D97 (DUF4124 domain-containing protein n=1 Tax=Sulfuriflexus mobilis TaxID=1811807 RepID=UPI000F819D97)

HSP 1 Score: 73.6 bits (179), Expect = 8.300e-14
Identity = 52/143 (36.36%), Postives = 74/143 (51.75%), Query Frame = 0
Query:    2 LLSAVLCGAS-ASAEIYKWVDENGVTQFSERQPETEAPVATVEIDSSKATDTRETWQEREA---AFAERAETASKAAXXXXXXXXXXXXXXXNCAAARKRATSLQ-RPRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFCK 139
            + + +LC AS A A +YKWVDENG+TQ+++  P  +   + V      A D ++   E E     F ER E  +KA                 C  ARK  T LQ  PRI  + +DG   ++ E++RQA I +ANEAI ++CK
Sbjct:   13 IFAGLLCLASPAMATLYKWVDENGITQYTQTPPP-KGDFSQVTPPPKPAVDPQQVQSELEKRLEGFQERRENEAKAKAEADKKAAEQAEQAAKCEQARKNLTFLQTHPRIRAIDKDGKATQLAEEERQARITQANEAIKQYCK 154          
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: A0A1S8DH82_9GAMM (DUF4124 domain-containing protein n=5 Tax=Pseudomonadales TaxID=72274 RepID=A0A1S8DH82_9GAMM)

HSP 1 Score: 65.1 bits (157), Expect = 1.300e-10
Identity = 49/144 (34.03%), Postives = 72/144 (50.00%), Query Frame = 0
Query:    1 ILLSAVL---CGASASAEIYKWVDENGVTQFSERQPETEAPVATVEIDSSKATDTRETWQEREAAFAERAETASKA--AXXXXXXXXXXXXXXXNCAAARKRATSLQR-PRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFC 138
            I++SA L   C ++ + ++Y+WVDENGVTQFS+ QP  E     +++  +    T     + ++   E+ E+   A  A                C A R   T++Q  PR+    EDGT  RIGED+RQA I KA   + E C
Sbjct:    4 IVISAALSLVCTSAMATQMYRWVDENGVTQFSQ-QPPAEDQYQRMQVKPAPELGTGSLAPDTDSPAGEQTESTESAEPAAAAQPTPEQQAKLAEQCDALRANLTTMQNNPRLRRTLEDGTVERIGEDERQAMIAKAQADLQEHC 146          
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: A0A661BVV5_9GAMM (DUF4124 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BVV5_9GAMM)

HSP 1 Score: 62.8 bits (151), Expect = 1.120e-9
Identity = 54/132 (40.91%), Postives = 66/132 (50.00%), Query Frame = 0
Query:   14 AEIYKWVDENGVTQFSERQP----ETEAPVATVEIDSSKATDTRETWQEREAAFAERA-ETASKAAXXXXXXXXXXXXXXXNCAAARKRATSLQ-RPRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFCK 139
            A  YKWVDE+G T ++++ P    E+E       ID S+A +  E+ QE      +R  E   K A               NC  AR R  SL  RPR+  V+ DGT VR  E  RQAEI KAN AIAE CK
Sbjct:   26 AVTYKWVDEHGNTHYTQKAPAGGIESETINPPPAIDRSQAEEALESDQE----ILDRGRENREKQAEARQRAVDEKARQKKNCEIARARLRSLTYRPRVFFVQPDGTYVRADEVTRQAEIAKANAAIAEVCK 153          
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: A0A2E6HLT6_9GAMM (DUF4124 domain-containing protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E6HLT6_9GAMM)

HSP 1 Score: 62.0 bits (149), Expect = 2.390e-9
Identity = 42/141 (29.79%), Postives = 71/141 (50.35%), Query Frame = 0
Query:    1 ILLSAVLCGASASAEIYKWVDENGVTQFSERQPE--TEAPVATVEI-DSSKATDTRETWQEREAAFAERAETASKAAXXXXXXXXXXXXXXXNCAAARKRATSLQRPRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFC 138
            ++LS++    S SAEIYKWVD+ G   + E+ P   T+  V T++I D+       E   ++  +  +R+E   K                  C  A+K+  + Q P++N  + DGT   +GE++RQA +KK+ E + + C
Sbjct:   17 LVLSSI--ALSVSAEIYKWVDDEGNIHYGEKPPSVNTKEKVKTIKIRDNVDTQRAAEALNKKSKSLNDRSEERKKEKTDALNEKKELEENIMRCEQAKKQLANYQHPKVNVKESDGTYRALGEEERQAGLKKSEELVKKAC 155          
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: A0A2E6KS55_9GAMM (DUF4124 domain-containing protein n=2 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E6KS55_9GAMM)

HSP 1 Score: 60.5 bits (145), Expect = 7.910e-9
Identity = 42/140 (30.00%), Postives = 66/140 (47.14%), Query Frame = 0
Query:    1 ILLSAVLCGASASAEIYKWVDENGVTQFSERQPETE-APVATVEI-DSSKATDTRETWQEREAAFAERAETASKAAXXXXXXXXXXXXXXXNCAAARKRATSLQRPRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFC 138
            I L   L   S SAEIYKWVDE G   + E+ P+TE   + T++I D+       +  +E+     E+ +   K                  C  A+K   + Q PR+N  ++DGT   +GE++RQ+ I +A + +   C
Sbjct:    8 IFLVFALIAFSISAEIYKWVDEEGKVHYGEKPPQTENTDIKTIKIRDNVDTKSASDALKEKTNKLNEKNKNRKKEKADQKLAKEELKKNEALCEKAKKNLANYQHPRVNIEQKDGTMKTLGEEERQSGIIEAKDIVKRAC 147          
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: A0A1H6B5V3_9GAMM (DUF4124 domain-containing protein n=5 Tax=Pseudomonadales TaxID=72274 RepID=A0A1H6B5V3_9GAMM)

HSP 1 Score: 60.1 bits (144), Expect = 1.010e-8
Identity = 44/144 (30.56%), Postives = 68/144 (47.22%), Query Frame = 0
Query:    3 LSAVLCGASASAEIYKWVDENGVTQFSERQPETE-------APVATVEIDSSKATDTRETWQEREAAFAERAETASKAAXXXXXXXXXXXXXXXNCAAARKRATSLQR-PRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFC 138
            L A+ C  + + ++YKWVDENGVTQFS++ P          APV  +   +          Q+     ++  E A+  A                CA+ R R T+++  PR++    DGT  RIGED+RQA I +    + ++C
Sbjct:    9 LLALGCSGAMATQLYKWVDENGVTQFSQQPPPDNQYQRMNVAPVPELGAPA----------QQNPPVTSDSPEPATNDASPAVDEAAAKAELEAYCASQRNRLTTMENNPRLSRTLPDGTVERIGEDERQAMIAETRSDLQKYC 142          
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: A0A7C1Q8A3_9GAMM (DUF4124 domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7C1Q8A3_9GAMM)

HSP 1 Score: 58.5 bits (140), Expect = 3.890e-8
Identity = 47/147 (31.97%), Postives = 66/147 (44.90%), Query Frame = 0
Query:    8 CGASASAEIYKWVDENGVTQFSERQPETE---------------APVATVEIDSSKATDTRETWQEREAAFAERAETASKAAXXXXXXXXXXXXXXXNCAAARKRATSLQR-PRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFC 138
            C    + ++YKWVDENGVTQFS++ P +                 P  T E  ++   D        E A A++AE+  KA                 CA  R+  T+L+  PR+     DG   RIGED+RQ+ I  A E +A +C
Sbjct:   14 CTHVMAEKLYKWVDENGVTQFSQQPPASNQYERMNVTPPPALGSTPPPTAETSTATEPDPG-----NENAAAQKAESEQKA------------MRVAQCAKLREDLTTLENNPRLGRTNADGEMERIGEDERQSMITTAREELASYC 143          
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: A0A3N4AE75_9PSED (DUF4124 domain-containing protein n=2 Tax=Pseudomonadales TaxID=72274 RepID=A0A3N4AE75_9PSED)

HSP 1 Score: 56.2 bits (134), Expect = 2.990e-7
Identity = 43/139 (30.94%), Postives = 67/139 (48.20%), Query Frame = 0
Query:    5 AVLCGASASAEIYKWVDENGVTQFSERQPETEA----PVATVEIDSSKATDTRETWQEREAAFAERAETASKAAXXXXXXXXXXXXXXXNCAAARKRATSLQR-PRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFC 138
            ++ C    +A++YKWVDENGVTQFS++ P ++      V+      S  T      + +    +E   TA++ A                CA  R+   +L+  PR+     DG   RIGED+RQA + +A E +A +C
Sbjct:   11 SLACTQVMAAKLYKWVDENGVTQFSQQPPASQQYERMNVSAPPQLGSTPTPAHTPPETQAGTSSESGSTAAQQAEREQKELREA-----QCAKLREDLKTLENNPRLGRTNADGQMERIGEDERQAMMTRAREELASYC 144          
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: A0A1G0JKR2_9GAMM (DUF4124 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11 TaxID=1798301 RepID=A0A1G0JKR2_9GAMM)

HSP 1 Score: 56.6 bits (135), Expect = 3.800e-7
Identity = 46/145 (31.72%), Postives = 73/145 (50.34%), Query Frame = 0
Query:    1 ILLSAVLCGA-SASAEIYKWVDENGVTQFSERQP------ETEAPVATVEIDSSKATDTRETWQEREAAFAERAETASKAAXXXXXXXXXXXXXXXNCAAARKRATSLQRPRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFC 138
            ILLS ++     A A++YKWVD  G T ++++ P      ET+ P  +V  ++ +A D+ +  Q+ E    E  E + + A                C + R R  SLQRPRI    E+G R R+ E++R   I++A + +AE C
Sbjct:   40 ILLSGMITITFDARAQMYKWVDAEGNTHYTQQLPPDGVEYETKKPPPSV--NTEEAVDSFQKMQDEERKSRESKEKSGQEAAIKEQDQAELQK---KCDSLRLRINSLQRPRITTTDENGNRARMPEEERLKSIEEAEKKLAEHC 179          
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Match: UPI001EEB5081 (DUF4124 domain-containing protein n=1 Tax=Halopseudomonas sp. RR6 TaxID=2918528 RepID=UPI001EEB5081)

HSP 1 Score: 55.1 bits (131), Expect = 8.060e-7
Identity = 47/149 (31.54%), Postives = 70/149 (46.98%), Query Frame = 0
Query:    1 ILLSAVL---CGASASAEIYKWVDENGVTQFSERQPETEAPVATVEIDSSKATDTRETWQEREAAFAERAETASKA-------AXXXXXXXXXXXXXXXNCAAARKRATSLQR-PRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFC 138
            I+++AVL   C ++ + ++Y+WVDENGVTQFS+ QP TE     +++  +    T         + A +A + S         A                C A R   T++Q  PR+    +DGT  RI ED+RQ  I KA   + E C
Sbjct:    4 IIITAVLGLACSSAMATQLYRWVDENGVTQFSQ-QPPTEDQYQRMQVKPAPELGT--------GSLAPKASSDSAXXXXXXXXAPAAQPTAEQQAKLAEWCNALRANLTTMQNNPRLRRTLDDGTVERIAEDERQTMIAKAQADLQEHC 143          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89057.20646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000F819D978.300e-1436.36DUF4124 domain-containing protein n=1 Tax=Sulfurif... [more]
A0A1S8DH82_9GAMM1.300e-1034.03DUF4124 domain-containing protein n=5 Tax=Pseudomo... [more]
A0A661BVV5_9GAMM1.120e-940.91DUF4124 domain-containing protein n=1 Tax=Gammapro... [more]
A0A2E6HLT6_9GAMM2.390e-929.79DUF4124 domain-containing protein n=2 Tax=Gammapro... [more]
A0A2E6KS55_9GAMM7.910e-930.00DUF4124 domain-containing protein n=2 Tax=Legionel... [more]
A0A1H6B5V3_9GAMM1.010e-830.56DUF4124 domain-containing protein n=5 Tax=Pseudomo... [more]
A0A7C1Q8A3_9GAMM3.890e-831.97DUF4124 domain-containing protein n=2 Tax=root Tax... [more]
A0A3N4AE75_9PSED2.990e-730.94DUF4124 domain-containing protein n=2 Tax=Pseudomo... [more]
A0A1G0JKR2_9GAMM3.800e-731.72DUF4124 domain-containing protein n=1 Tax=Gammapro... [more]
UPI001EEB50818.060e-731.54DUF4124 domain-containing protein n=1 Tax=Halopseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 70..97
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..139
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
IPR025392Domain of unknown function DUF4124PFAMPF13511DUF4124coord: 4..54
e-value: 1.2E-9
score: 38.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89057contigM-pyrifera_M_contig89057:3..422 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89057.20646.1mRNA_M-pyrifera_M_contig89057.20646.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig89057 3..422 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig89057.20646.1 ID=prot_M-pyrifera_M_contig89057.20646.1|Name=mRNA_M-pyrifera_M_contig89057.20646.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=140bp
ILLSAVLCGASASAEIYKWVDENGVTQFSERQPETEAPVATVEIDSSKAT
DTRETWQEREAAFAERAETASKAAAERAKAEAEAAAKRANCAAARKRATS
LQRPRINEVKEDGTRVRIGEDQRQAEIKKANEAIAEFCK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025392DUF4124