prot_M-pyrifera_M_contig88853.20621.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88853.20621.1
Unique Nameprot_M-pyrifera_M_contig88853.20621.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length106
Homology
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BLAST of mRNA_M-pyrifera_M_contig88853.20621.1 vs. uniprot
Match: A0A1X7VF94_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VF94_AMPQE)

HSP 1 Score: 59.7 bits (143), Expect = 2.370e-8
Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 0 
Query:    8 ASVVHVVAYLEDQHIRQWPVEKRSPLREE-GEGWGSVFVRYLRDAECPFAPDLAPSSSXXXXXXPAVPPSFT 78
            A +  +V +LEDQ IR + +++R+PLR+E G+ W  VF +YL D +CPF+ D AP+         AV   FT
Sbjct:   30 AQLKSLVIWLEDQKIRHYTIDERTPLRDETGDNWNKVFEKYLTDMQCPFSFDSAPTPCLHWLIDEAVRCEFT 101
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BLAST of mRNA_M-pyrifera_M_contig88853.20621.1 vs. uniprot
Match: A0A2L2XVB6_PARTP (Uncharacterized protein n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2XVB6_PARTP)

HSP 1 Score: 49.7 bits (117), Expect = 9.180e-5
Identity = 29/89 (32.58%), Postives = 39/89 (43.82%), Query Frame = 0 
Query:   14 VAYLEDQHIRQWPVEKRSPLRE-EGEGWGSVFVRYLRDAECPFAPDLAPSSSXXXXXXPAVPPSFTPEELHRLVQWLLGQAICVDFEES 101
            V +LEDQ IRQ+P+E RSPLR      W   F  YL D  CPF                         E   +  WLLG A+ +++ ++
Sbjct:   30 VVWLEDQVIRQYPIEDRSPLRNITNAAWEDAFKVYLADLACPFT------------------------EKEEICDWLLGLAVRLEYGDN 94
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88853.20621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A1X7VF94_AMPQE2.370e-841.67Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
A0A2L2XVB6_PARTP9.180e-532.58Uncharacterized protein n=1 Tax=Parasteatoda tepid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019265RNA transcription, translation and transport factor proteinPFAMPF10036RLLcoord: 9..105
e-value: 2.4E-12
score: 47.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88853contigM-pyrifera_M_contig88853:489..806 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88853.20621.1mRNA_M-pyrifera_M_contig88853.20621.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88853 489..806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88853.20621.1 ID=prot_M-pyrifera_M_contig88853.20621.1|Name=mRNA_M-pyrifera_M_contig88853.20621.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp
LILVAELASVVHVVAYLEDQHIRQWPVEKRSPLREEGEGWGSVFVRYLRD
AECPFAPDLAPSSSASSSSSPAVPPSFTPEELHRLVQWLLGQAICVDFEE
SAAELN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019265RTRAF