prot_M-pyrifera_M_contig88829.20614.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88829.20614.1
Unique Nameprot_M-pyrifera_M_contig88829.20614.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length113
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88829.20614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005184Domain of unknown function DUF306, Meta/HslJPFAMPF03724METAcoord: 2..108
e-value: 1.7E-6
score: 27.9
IPR038670HslJ-like superfamilyGENE3D2.40.128.270coord: 2..110
e-value: 4.5E-5
score: 25.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88829contigM-pyrifera_M_contig88829:12..350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88829.20614.1mRNA_M-pyrifera_M_contig88829.20614.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88829 12..350 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88829.20614.1 ID=prot_M-pyrifera_M_contig88829.20614.1|Name=mRNA_M-pyrifera_M_contig88829.20614.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp
VWTVDAIELDGVDIPFEAGLVLVDIDTSLASVEAATGCRRLFGSFTLLDD
GRAGFTLPGGTKLACDDDEEPWLVELDEAFDVAIGQVDSWSGGGDSLLLT
GPDAELLLVRAG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005184DUF306_Meta_HslJ
IPR038670HslJ-like_sf