prot_M-pyrifera_M_contig88695.20595.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88695.20595.1
Unique Nameprot_M-pyrifera_M_contig88695.20595.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length172
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88695.20595.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 48..95
e-value: 2.8E-5
score: 23.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 42..127
e-value: 3.3E-12
score: 48.3
IPR003903Ubiquitin interacting motifPROSITEPS50330UIMcoord: 28..47
score: 9.063
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 45..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88695contigM-pyrifera_M_contig88695:292..807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88695.20595.1mRNA_M-pyrifera_M_contig88695.20595.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88695 292..807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88695.20595.1 ID=prot_M-pyrifera_M_contig88695.20595.1|Name=mRNA_M-pyrifera_M_contig88695.20595.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp
MALEESNVPHDDDHAATLRLVAELAREQEQEQLDLALAQSLQEMTFECPL
CMDVFSIEDVFEASDCGHLLCRVDARRMVETQVKEGKAEVVCQLCTGEAK
AIISHSQIRLLVGEETLAQLLRQDRDLILQDSRAVQCRAPDCIGIFLCAT
EEERVFECPLNPEHNYCMPCKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR003903UIM_dom