mRNA_M-pyrifera_M_contig109825.2057.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109825.2057.1 vs. uniprot
Match: A0A2E7KIE5_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KIE5_9PLAN) HSP 1 Score: 122 bits (306), Expect = 3.460e-34 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1
Query: 1 TEVTLDELTARVRERVQGGVMDVIIKADRNVPHGFVQEVTRAVTDVDGVKFYIGIEEKKNR 183
TEVTLDELTARVRERVQGGVMDVIIKADRNVPHGFVQEVTRAVTDVDGVKFYIGIEEKKNR
Sbjct: 98 TEVTLDELTARVRERVQGGVMDVIIKADRNVPHGFVQEVTRAVTDVDGVKFYIGIEEKKNR 158
BLAST of mRNA_M-pyrifera_M_contig109825.2057.1 vs. uniprot
Match: A0A517Q8N0_9PLAN (Biopolymer transport protein ExbD/TolR n=10 Tax=Planctomycetaceae TaxID=126 RepID=A0A517Q8N0_9PLAN) HSP 1 Score: 117 bits (293), Expect = 3.260e-32 Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 1
Query: 1 TEVTLDELTARVRERVQGGVMDVIIKADRNVPHGFVQEVTRAVTDVDGVKFYIGIEEKKNR 183
TEVTLDELTARVRERVQGGVMDVIIKADRNVPHGFVQEVTRAVT+VDGVKFYIGIEEKK +
Sbjct: 98 TEVTLDELTARVRERVQGGVMDVIIKADRNVPHGFVQEVTRAVTEVDGVKFYIGIEEKKEK 158
BLAST of mRNA_M-pyrifera_M_contig109825.2057.1 vs. uniprot
Match: A0A517RH32_9PLAN (Biopolymer transport protein ExbD/TolR n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517RH32_9PLAN) HSP 1 Score: 110 bits (275), Expect = 1.800e-29 Identity = 54/58 (93.10%), Postives = 57/58 (98.28%), Query Frame = 1
Query: 4 EVTLDELTARVRERVQGGVMDVIIKADRNVPHGFVQEVTRAVTDVDGVKFYIGIEEKK 177
EVTL+ELTAR+RERVQGGVMDVIIKADR VPHGFVQEVTRAVT+VDGVKFYIGIEEKK
Sbjct: 100 EVTLEELTARIRERVQGGVMDVIIKADRGVPHGFVQEVTRAVTEVDGVKFYIGIEEKK 157
BLAST of mRNA_M-pyrifera_M_contig109825.2057.1 vs. uniprot
Match: A0A517VW30_9PLAN (Biopolymer transport protein ExbD/TolR n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VW30_9PLAN) HSP 1 Score: 107 bits (268), Expect = 2.070e-28 Identity = 53/60 (88.33%), Postives = 57/60 (95.00%), Query Frame = 1
Query: 1 TEVTLDELTARVRERVQGGVMDVIIKADRNVPHGFVQEVTRAVTDVDGVKFYIGIEEKKN 180
TEV+L+ELTA+VRERVQ GV DVIIKADR VPHGFVQEVTRAVT+VDGVKFYIGIEEKKN
Sbjct: 99 TEVSLEELTAKVRERVQNGVSDVIIKADRGVPHGFVQEVTRAVTEVDGVKFYIGIEEKKN 158
BLAST of mRNA_M-pyrifera_M_contig109825.2057.1 vs. uniprot
Match: A0A3N5S0J8_9PLAN (Biopolymer transporter ExbD n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3N5S0J8_9PLAN) HSP 1 Score: 62.0 bits (149), Expect = 1.460e-10 Identity = 26/58 (44.83%), Postives = 44/58 (75.86%), Query Frame = 1
Query: 1 TEVTLDELTARVRERVQGGVMDVIIKADRNVPHGFVQEVTRAVTDVDGVKFYIGIEEK 174
T V + + ARVR++V G DV+IKA+R + HG VQEV RA+ +++GV+F++G++++
Sbjct: 93 TAVDVPAIQARVRQQVAVGHNDVVIKAERGLSHGAVQEVARAINEIEGVRFFVGVKDR 150
BLAST of mRNA_M-pyrifera_M_contig109825.2057.1 vs. uniprot
Match: A0A3M1VDH9_9BACT (Biopolymer transporter ExbD n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1VDH9_9BACT) HSP 1 Score: 60.8 bits (146), Expect = 3.880e-10 Identity = 28/58 (48.28%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 4 EVTLDELTARVRERVQGGVMDVIIKADRNVPHGFVQEVTRAVTDVDGVKFYIGIEEKK 177
E ++DE+ V + ++ G V++KA+R VP+GFVQEV +AVT VDGV+F IG+ +K+
Sbjct: 90 EASVDEVEQYVADGLRAGRSFVVVKAEREVPNGFVQEVLKAVTAVDGVEFSIGVRDKR 147
BLAST of mRNA_M-pyrifera_M_contig109825.2057.1 vs. uniprot
Match: A0A517ZYH7_9PLAN (Biopolymer transport protein ExbD/TolR n=2 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZYH7_9PLAN) HSP 1 Score: 60.5 bits (145), Expect = 5.900e-10 Identity = 26/58 (44.83%), Postives = 42/58 (72.41%), Query Frame = 1
Query: 4 EVTLDELTARVRERVQGGVMDVIIKADRNVPHGFVQEVTRAVTDVDGVKFYIGIEEKK 177
EV +D++ V E+V GV V+I+A+R + HG VQ V RA+ +++GV+F+I +EEK+
Sbjct: 93 EVDVDDVRRHVEEQVAAGVNKVMIQAEREISHGDVQNVARAIAEIEGVEFFIAVEEKE 150
BLAST of mRNA_M-pyrifera_M_contig109825.2057.1 vs. uniprot
Match: A0A836VTC7_9PLAN (Biopolymer transporter ExbD n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A836VTC7_9PLAN) HSP 1 Score: 60.1 bits (144), Expect = 9.130e-10 Identity = 25/60 (41.67%), Postives = 47/60 (78.33%), Query Frame = 1
Query: 4 EVTLDELTARVRERVQGGVMDVIIKADRNVPHGFVQEVTRAVTDVDGVKFYIGIEEKKNR 183
E T+D++ V E ++ G +V++KADR+VP GFVQ V +A+++V+GV+F IG+++++++
Sbjct: 96 EGTVDDVRRFVEEGLREGKTEVVVKADRDVPSGFVQRVLKAISEVEGVQFSIGVQDEQSK 155
BLAST of mRNA_M-pyrifera_M_contig109825.2057.1 vs. uniprot
Match: A0A3B1DKG4_9ZZZZ (Biopolymer transport protein ExbD/TolR n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DKG4_9ZZZZ) HSP 1 Score: 57.4 bits (137), Expect = 1.020e-8 Identity = 30/61 (49.18%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 4 EVTLDELTARVRERVQGGVMD----VIIKADRNVPHGFVQEVTRAVTDVDGVKFYIGIEEK 174
E T D+ A +R+ V+ G++D VII+ADR VP G V++V RAV+D+DG+KF IG+++K
Sbjct: 97 ECTPDDRDA-IRDDVENGILDEKNEVIIQADREVPAGVVKKVMRAVSDIDGIKFSIGVKKK 156
BLAST of mRNA_M-pyrifera_M_contig109825.2057.1 vs. uniprot
Match: A0A5C5X911_9PLAN (Biopolymer transport protein ExbD/TolR n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5X911_9PLAN) HSP 1 Score: 56.6 bits (135), Expect = 1.730e-8 Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 7 VTLDELTARVRERVQGGVMDVIIKADRNVPHGFVQEVTRAVTDVDG---VKFYIGIEEKKN 180
VT +E+TA V E + G M+VIIKAD +P G+V+EV RA + + +KFY+G+ +K N
Sbjct: 88 VTPEEVTAYVNEGISEGKMNVIIKADSELPSGYVEEVARAANNTENEAELKFYVGVMDKDN 148 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109825.2057.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109825.2057.1 >prot_M-pyrifera_M_contig109825.2057.1 ID=prot_M-pyrifera_M_contig109825.2057.1|Name=mRNA_M-pyrifera_M_contig109825.2057.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=62bp TEVTLDELTARVRERVQGGVMDVIIKADRNVPHGFVQEVTRAVTDVDGVKback to top mRNA from alignment at M-pyrifera_M_contig109825:417..602- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109825.2057.1 ID=mRNA_M-pyrifera_M_contig109825.2057.1|Name=mRNA_M-pyrifera_M_contig109825.2057.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=186bp|location=Sequence derived from alignment at M-pyrifera_M_contig109825:417..602- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109825:417..602- >mRNA_M-pyrifera_M_contig109825.2057.1 ID=mRNA_M-pyrifera_M_contig109825.2057.1|Name=mRNA_M-pyrifera_M_contig109825.2057.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=372bp|location=Sequence derived from alignment at M-pyrifera_M_contig109825:417..602- (Macrocystis pyrifera P11B4 male)back to top |