mRNA_M-pyrifera_M_contig8814.20476.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8814.20476.1
Unique NamemRNA_M-pyrifera_M_contig8814.20476.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig8814.20476.1 vs. uniprot
Match: D7G993_ECTSI (Matrin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G993_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 2.030e-121
Identity = 173/183 (94.54%), Postives = 176/183 (96.17%), Query Frame = 1 
Query:    4 VKALLDLQGDTLESTKRQVDKKQTRTVEERDQEIEEEEQGALPEFNEEEDXXXXXEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDKLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 552
            VKALL++Q DTLESTKRQVDKK TRTVEERDQEI+EEEQGALPEFNEEE XXX  EGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKD LDKEQWN EDNEEYEDGEGNVLNRRTYEDLARQGLM
Sbjct:   26 VKALLEVQTDTLESTKRQVDKKHTRTVEERDQEIQEEEQGALPEFNEEEXXXXDEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 208
[Close]
BLAST of mRNA_M-pyrifera_M_contig8814.20476.1 vs. uniprot
Match: D7FUU5_ECTSI (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUU5_ECTSI)

HSP 1 Score: 345 bits (886), Expect = 7.130e-115
Identity = 171/183 (93.44%), Postives = 174/183 (95.08%), Query Frame = 1 
Query:    4 VKALLDLQGDTLESTKRQVDKKQTRTVEERDQEIEEEEQGALPEFNEEEDXXXXXEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDKLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 552
            VKALL++Q DTLESTKRQVDKK TRTVEERDQEI+EEEQGALPEFNE   XXX  EGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKD LDKEQWN EDNEEYEDGEGNVLNRRTYEDLARQGLM
Sbjct:  358 VKALLEVQTDTLESTKRQVDKKHTRTVEERDQEIQEEEQGALPEFNEXXXXXXDEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 540
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BLAST of mRNA_M-pyrifera_M_contig8814.20476.1 vs. uniprot
Match: A0A836CE40_9STRA (Matrin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE40_9STRA)

HSP 1 Score: 279 bits (714), Expect = 5.800e-89
Identity = 133/183 (72.68%), Postives = 153/183 (83.61%), Query Frame = 1 
Query:    4 VKALLDLQGDTLESTKRQVDKKQTRTVEERDQEIEEEEQGALPEFNEEEDXXXXXEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDKLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 552
            V+A L+   D  E+T++QV+KKQTRTVEERD EI +EE G LPE  + ++     +GPIYNPLNLPLGWDGKPIP+WLYKLHGLGVE+KCEICGDFSY GRR FDRHFQE+RHAHGMRCLGIPNTKHFHDI LIQDA DLYAK+K KL+ E W  +  EE+ED EGNVLN+RTYEDLARQGL+
Sbjct:  360 VRAFLEALSDVWEATRKQVEKKQTRTVEERDAEIADEEAGTLPEVGDADEEDSDDDGPIYNPLNLPLGWDGKPIPFWLYKLHGLGVEYKCEICGDFSYWGRRAFDRHFQEFRHAHGMRCLGIPNTKHFHDITLIQDAMDLYAKLKGKLEVEAWTPDVGEEFEDSEGNVLNKRTYEDLARQGLL 542
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BLAST of mRNA_M-pyrifera_M_contig8814.20476.1 vs. uniprot
Match: A0A812TNG2_SYMMI (SF3A3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TNG2_SYMMI)

HSP 1 Score: 258 bits (658), Expect = 2.920e-82
Identity = 125/183 (68.31%), Postives = 149/183 (81.42%), Query Frame = 1 
Query:    4 VKALLDLQGDTLESTKRQVDKKQTRTVEERDQEIEEEEQGALPEFNEEEDXXXXXEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDKLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 552
            +++L  L  + + +T+R  +K+QTRT+EE+   +EEEE G LP+  EE D     EGP+YNPLNLPLGWDGKPIP+WLYKLHGLGVEFKCEICG+ SY GRR FDRHFQEWRHAHGMRCLG+PNTKHFHDI LI+DA  LY+KI+D L KEQ+  +  EE+ED EGNVLNRRTYEDLARQGL+
Sbjct:  217 IQSLCSLMAEIVTATRRHAEKQQTRTLEEKLALLEEEEYGTLPDV-EEADDDEDDEGPLYNPLNLPLGWDGKPIPFWLYKLHGLGVEFKCEICGNQSYWGRRAFDRHFQEWRHAHGMRCLGVPNTKHFHDITLIEDALALYSKIRDSLKKEQFVEDVEEEFEDSEGNVLNRRTYEDLARQGLL 398
[Close]
BLAST of mRNA_M-pyrifera_M_contig8814.20476.1 vs. uniprot
Match: A0A7S2HV93_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV93_9STRA)

HSP 1 Score: 258 bits (659), Expect = 4.440e-81
Identity = 132/183 (72.13%), Postives = 152/183 (83.06%), Query Frame = 1 
Query:   13 LLDLQGDTLESTKRQVDKKQTRTVEERDQEIEEEEQGALPEFNEEEDXXXXX---EGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDKLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 552
            L D   D L++ +R VDKKQT+ VEERD E  EEE GAL   ++EE XXXXX   EGP+YNPLNLPLGWDGKPIPYWLYKLHGLGVE+KCEICG+ SY GRR FDRHFQEWRHA+GMRCL IPNTKHFHDI LI+DA +LY KIKD+L +EQ++A   EE+ED EG+VLNRRT+EDLARQGL+
Sbjct:  328 LCDQMADVLDAPRRYVDKKQTQLVEERDAEFAEEESGALAALDDEEXXXXXXXXDEGPLYNPLNLPLGWDGKPIPYWLYKLHGLGVEYKCEICGNMSYWGRRAFDRHFQEWRHAYGMRCLKIPNTKHFHDITLIEDATNLYDKIKDQLKQEQFDANQEEEFEDSEGHVLNRRTFEDLARQGLL 510
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BLAST of mRNA_M-pyrifera_M_contig8814.20476.1 vs. uniprot
Match: A0A7S2V2Q3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Q3_9STRA)

HSP 1 Score: 250 bits (638), Expect = 2.470e-80
Identity = 128/190 (67.37%), Postives = 147/190 (77.37%), Query Frame = 1 
Query:    1 QVKALLDLQGDTLESTKRQVDKKQTRTVEERDQEIEEEEQGALPEFNEE------EDXXXXXEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDKLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 552
            ++ AL +   D + +T++QV++KQT+T+EER         G      +E        XXXX EGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVE+KCEICGD+SY GRR FDRHFQEWRHAHGMRCLGIPNTKHFHDI LI+DA  L+ KIKD+L  E WNA+  EEYED EGNVLNRRTYEDLARQGL+
Sbjct:  125 EISALYEQMKDVVMNTRKQVERKQTKTMEERXXXXXXXXXGTGVAAEDELAXXXXXXXXXXDEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEYKCEICGDYSYMGRRAFDRHFQEWRHAHGMRCLGIPNTKHFHDITLIEDATALFDKIKDQLAGEMWNADMEEEYEDSEGNVLNRRTYEDLARQGLL 314
[Close]
BLAST of mRNA_M-pyrifera_M_contig8814.20476.1 vs. uniprot
Match: A0A7S2W3N3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3N3_9STRA)

HSP 1 Score: 251 bits (641), Expect = 2.760e-78
Identity = 126/184 (68.48%), Postives = 151/184 (82.07%), Query Frame = 1 
Query:   31 DTLESTKRQVDKKQTRTVEERDQEIEEEEQGALPE----------FNEEEDXXXXXEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDKLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 552
            D +E+TKR V+K+QT+ VEER  E+EEEE G + +           ++EEDXXXX +GP+YNPLNLPLGWDGKPIP+WLYKLHGLGVE+KCEICG+ SY GRR FDRHFQEWRHAHGMRCLGIPNTKHFHDI LI+DA +LY K+KD +  EQ++A   EE+ED EG+VLNR+TYEDLARQGL+
Sbjct:  336 DVVEATKRHVEKRQTQLVEERAAELEEEEFGTMADQIAGEDGTGGLDDEEDXXXXDDGPLYNPLNLPLGWDGKPIPFWLYKLHGLGVEYKCEICGNQSYWGRRAFDRHFQEWRHAHGMRCLGIPNTKHFHDITLIEDAINLYEKLKDTIRIEQFDAAQEEEFEDSEGHVLNRKTYEDLARQGLL 519
[Close]
BLAST of mRNA_M-pyrifera_M_contig8814.20476.1 vs. uniprot
Match: A0A6V1NE02_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NE02_HETAK)

HSP 1 Score: 234 bits (598), Expect = 1.150e-76
Identity = 104/128 (81.25%), Postives = 112/128 (87.50%), Query Frame = 1 
Query:  169 EGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDKLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 552
            EGP+YNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCE+CG  SY GRR FDRHFQEWRHAHGMRCLGIPNTKHFHDI  I+DA+ LYAK+K  LD + W+    EEYED EGNVLNRRTYEDLARQGL+
Sbjct:   17 EGPVYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEVCGGASYMGRRAFDRHFQEWRHAHGMRCLGIPNTKHFHDITTIEDAKALYAKLKAGLDGDAWDGAVEEEYEDSEGNVLNRRTYEDLARQGLL 144
[Close]
BLAST of mRNA_M-pyrifera_M_contig8814.20476.1 vs. uniprot
Match: A0A8K1C7B4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7B4_PYTOL)

HSP 1 Score: 244 bits (622), Expect = 2.210e-75
Identity = 118/185 (63.78%), Postives = 142/185 (76.76%), Query Frame = 1 
Query:    4 VKALLDLQGDTLESTKRQVDKKQTRTVEERDQEIEEEEQGALPEFNEE--EDXXXXXEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDKLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 552
            ++ + +L  + +  T   ++ KQTRT EE   EI EEE+GA  + + E  +      + PIYNPLNLPLGWDGKPIPYWLYKLHGLGVE+KCEICG+ SY GRR FDRHFQ+WRHAHGMRCLGIPNTKHFHDI L++DA  LY K+K ++D E WNA   EE+ED EGNVLNR+TYEDLARQGL+
Sbjct:  341 IRRMYELLTEVIHGTISYLEVKQTRTHEELQAEIAEEEEGAFSDVDVENMDQDMDDEDQPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEYKCEICGNHSYWGRREFDRHFQQWRHAHGMRCLGIPNTKHFHDITLMRDAIALYEKLKTEIDAESWNATTEEEFEDSEGNVLNRKTYEDLARQGLL 525
[Close]
BLAST of mRNA_M-pyrifera_M_contig8814.20476.1 vs. uniprot
Match: A0A1V9Z208_9STRA (Splicing factor 3A n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z208_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.460e-74
Identity = 119/184 (64.67%), Postives = 141/184 (76.63%), Query Frame = 1 
Query:    4 VKALLDLQGDTLESTKRQVDKKQTRTVEERDQEIEEEEQGALPEFNEEEDXXXXX-EGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYKGRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDKLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 552
            VK L+ L  + + +T   ++ KQTRT EE   EI EEE  AL +   + D      E P YNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICG+ SY GRR+FDRHFQ+WRHAHGMRCLGIPNTKHFHDI  + DA  LY K+K++L+KE WN  + EE+ED EGNVLN++TY+DLARQGL+
Sbjct:  307 VKTLIGLLTEVVHATISFLELKQTRTPEELQAEILEEEDDALSDVEIDNDNVDDDDEQPFYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGNHSYWGRRDFDRHFQQWRHAHGMRCLGIPNTKHFHDITSMADALALYEKLKEQLEKETWNKANEEEFEDSEGNVLNKKTYQDLARQGLL 490
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8814.20476.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G993_ECTSI2.030e-12194.54Matrin-type domain-containing protein n=1 Tax=Ecto... [more]
D7FUU5_ECTSI7.130e-11593.44Matrin-type domain-containing protein n=2 Tax=Ecto... [more]
A0A836CE40_9STRA5.800e-8972.68Matrin-type domain-containing protein n=1 Tax=Trib... [more]
A0A812TNG2_SYMMI2.920e-8268.31SF3A3 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S2HV93_9STRA4.440e-8172.13Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2V2Q3_9STRA2.470e-8067.37Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2W3N3_9STRA2.760e-7868.48Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V1NE02_HETAK1.150e-7681.25Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8K1C7B4_PYTOL2.210e-7563.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9Z208_9STRA1.460e-7464.67Splicing factor 3A n=1 Tax=Achlya hypogyna TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8814contigM-pyrifera_M_contig8814:8104..11581 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score353.2
Seed ortholog evalue7.3e-95
Seed eggNOG ortholog2880.D7G993
Preferred nameSF3A3
KEGG rclassRC00005,RC00443
KEGG koko:K01676,ko:K10777,ko:K12827
KEGG ReactionR00381,R01082
KEGG Pathwayko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko03040,ko03450,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map03040,map03450
KEGG ModuleM00009,M00011,M00173,M00352,M00374
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000245,GO:0000375,GO:0000377,GO:0000389,GO:0000395,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005686,GO:0005737,GO:0005829,GO:0006139,GO:0006376,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009566,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0019953,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031974,GO:0031981,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043900,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0045292,GO:0045595,GO:0045694,GO:0046483,GO:0050789,GO:0050793,GO:0050794,GO:0051239,GO:0051704,GO:0065003,GO:0065007,GO:0070013,GO:0071004,GO:0071010,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:1901360,GO:1901363,GO:1902494,GO:1990904,GO:2000026,GO:2000241
EggNOG free text desc.Subtilase family
EggNOG OGsCOG5188@1,KOG2636@2759
Ec32 ortholog descriptionDomain of unknown function DUF3449
Ec32 orthologEc-00_011370.1
EC4.2.1.2,6.5.1.1
COG Functional cat.AO
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03041,ko03400
Exons4
Model size555
Cds size555
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8814.20476.1prot_M-pyrifera_M_contig8814.20476.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8814 8104..11581 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816791.037125-CDS-M-pyrifera_M_contig8814:8103..82501622816791.037125-CDS-M-pyrifera_M_contig8814:8103..8250Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8814 8104..8250 -
1692278180.363057-CDS-M-pyrifera_M_contig8814:8103..82501692278180.363057-CDS-M-pyrifera_M_contig8814:8103..8250Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8814 8104..8250 -
1622816791.0479848-CDS-M-pyrifera_M_contig8814:9085..91851622816791.0479848-CDS-M-pyrifera_M_contig8814:9085..9185Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8814 9086..9185 -
1692278180.3767657-CDS-M-pyrifera_M_contig8814:9085..91851692278180.3767657-CDS-M-pyrifera_M_contig8814:9085..9185Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8814 9086..9185 -
1622816791.0589662-CDS-M-pyrifera_M_contig8814:10374..105381622816791.0589662-CDS-M-pyrifera_M_contig8814:10374..10538Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8814 10375..10538 -
1692278180.3880317-CDS-M-pyrifera_M_contig8814:10374..105381692278180.3880317-CDS-M-pyrifera_M_contig8814:10374..10538Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8814 10375..10538 -
1622816791.0713003-CDS-M-pyrifera_M_contig8814:11437..115811622816791.0713003-CDS-M-pyrifera_M_contig8814:11437..11581Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8814 11438..11581 -
1692278180.3985202-CDS-M-pyrifera_M_contig8814:11437..115811692278180.3985202-CDS-M-pyrifera_M_contig8814:11437..11581Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8814 11438..11581 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8814.20476.1

>prot_M-pyrifera_M_contig8814.20476.1 ID=prot_M-pyrifera_M_contig8814.20476.1|Name=mRNA_M-pyrifera_M_contig8814.20476.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp
QVKALLDLQGDTLESTKRQVDKKQTRTVEERDQEIEEEEQGALPEFNEEE
DEESDEEGPIYNPLNLPLGWDGKPIPYWLYKLHGLGVEFKCEICGDFSYK
GRRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDKLD
KEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM*
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mRNA from alignment at M-pyrifera_M_contig8814:8104..11581-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8814.20476.1 ID=mRNA_M-pyrifera_M_contig8814.20476.1|Name=mRNA_M-pyrifera_M_contig8814.20476.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3478bp|location=Sequence derived from alignment at M-pyrifera_M_contig8814:8104..11581- (Macrocystis pyrifera P11B4 male)
CAGGTGAAGGCCCTTCTTGACCTTCAGGGAGACACGCTGGAGTCGACGAA
GCGACAGGTGGACAAGAAGCAGACGAGAACCGTCGAGGAGCGCGACCAAG
AGATAGAGGAGGAGGAGCAGGGAGCCCTCCCGGAGTTCAACGAGGTCGGT
GGCGTTCTCCGCCCGCTATATGCACCAATAGCTACGGTATAAGCATCAAA
TATTAAGTGTGAAATGTTACATATTTTTAGTTGGTTATTCCTTGACGATG
TAGCCGTACCGATGTTTTGGACACGAAATGCTCAGGATTCGAGTTGGGAG
ATGCAGTATTCATCAAGGCTATTCACGGGTCGGGTCAGGAGGTCTTCAAA
ATCTCGCGCTTCGGGCCGGGGTCGGATTAGGTGACCCGCCCCGACCCGCC
CCAACCTGATGCGCGAATTTTCACCCGACCCATGAACAGCCCTGATATTA
AGTGTTGATGTTTCGACCTTGACTTCCACAAAATACTTACGGGACGGAAA
TTATGCGGCCGGACGCGAGAAGGTCAGCGCAGTGAATTTTTTTTTCGTGA
CGCCGTCTGTTGGAGGAGGTTCTTCACAATGACTCTGTACGCTGCTATCA
TAGGTACCCCCGCATTTTCTGTCCGATCTCCTTCTCCCGTCAGGTTGGTG
ACGGGCGGATAAAAACAACCTGTAGGAAAGGGGTTGCTTTGGGTTAAAAC
CTTTCGTGGTGCTTTCTATTTGCCGGATATCTGCCAGCTCTTGTTTGTCT
TTCTATTTTATTTTACACGAATTCGGCAGTCGTGCTTTTTAATGTCCCCC
CCCCCCCAATACTTTAGCTTTTGGTGGGAGGGGGGGGGGAGGGGCCTGGC
GATGTGTGTGACGTGTAGACGGCGGTTTTGTCCCCGCCGCCGTTGCCCAA
GCGTCACATTCCAAGAACATTTCATAGATCATACTACCAGTTGTTTCGTG
TTTTGTGTGTTGAGGTATGAATGTTGACGTAGCGAAACGCCTTTTCGTCT
TTCACGTTTTTTTTTCGTTGCTGTCGGCTTCGCGATGTGTCAGGAGGAAG
ATGAAGAGAGCGACGAAGAAGGGCCTATTTACAACCCTCTCAACCTCCCT
CTCGGCTGGGATGGCAAGCCCATCCCCTACTGGCTGTACAAGCTGCACGG
CCTTGGGGTAGAGTTCAAGTGCGAGATCTGCGGCGACTTTAGCTACAAGG
GTCGGAGGTGACGCCTACCTTGAATCTTGTGATTGCTAGTTCGGACGCCC
GTTGTTGTCGCGCCGTTAGCCGTGGTTTGATTTTTTTTCTTTGTATTTGC
TTGGTCGTTTTTTGTGTTGTAGGTTTTCGCGTTGTTGTTATTTCTTTTTG
TTGTATTTTCCGTTTTTTTTCGCGTTTTGCTTTGCGTCGGCTCTGTTTTT
GTAGCCCTTTCTACTGCACATGGTGGATGTTGTGCATGTTTTGGTTGGCT
TATAGTGTCTGTGAAACACTGTTCATGGGGGACATAACCGCAGTAGCAGC
AGAGGTATTTGATTTTTTTTTTTTTTTTTTCTCGAGAAAACAGTCAGCGC
GTCCATTTTTTTTTCTTTTGTTCAAACATCGCTAAACCATTTCATTCCCT
TCTGCACAAGAATCTGGGTGCGTCGTGGAATACTCGCAAGATCTAAGAAG
TGCACTGGAAAAAGTGTCGAATTTGCACCTAAAAGCATGAGCCAAAAATG
AACTTGACCTAAGATTTCCGGTTAAGCTACACCTGTCATTTTACCTATCC
AAAAATAAGAAGCTGCAATATTGTAGCTCGAGGTTGAAGAGGAGGTCTCC
TTTTTGCCCCTCCGCACTGCGAATTGTTCAAGCGCACGAGCGGCCTGTCC
ACCTCTGGATCAAAACATAATTAGAGTTGAAAAACCTGCGACGGGGCGTT
TATCTCACGGGTTGGGTTGGGTCGGGTCGGGTCGGGTCAGGAAATTTCCA
AACTCTCACGGATCGGGTTGGGTCTGGTCGCCTTTTTATCCGACCTGAGA
ACAGCTCTGCTTTTTTCTGCAGCGGTGGGATCCCAGAGCACTCTACGAGT
AGAGCCCTATACTTCGTATTCGTTTGATAATCCGATACGTATAGTATGAA
TATTCAATATTCAATACTTTTTTTTCACGAGACGAGCTGACTTTTTTTTC
TGTTCTTTTAGCGTTTTTGCGGCGCTGTGGTCTTTATTATGGTAGTGTTC
AACCGTACTTGTACTTGTGTCTACTTTGTGTCCGTATATATGTTTTTGTT
TGTTTGTTTTTCATGTGGTTTTGCGTACGTACCTTTTTCCTGTCGCAGGA
ACTTCGACCGTAAATGTGTCTGTTTGTGTCTGCATTTATGTTTTTTTTTA
GTTTTTAGTTTTTAAATGTGGCTTTGCGTGCTTTGTTTTTTCGCAGGAAC
TTCGACCGACACTTCCAGGAGTGGCGCCACGCCCACGGCATGCGGTGCCT
GGGAATACCGAACACGAAGCACTTCCACGACATCGTCCTCATCCAGGTGG
GGATATATTTCTTGAGGAGTTGGTAGTCCTTGCCGGCTTTGGCGACAAAC
AGCAACGTGACGTTCGGCTGCGGAAGGAAAGTGCAGTGGAGGGGGGGAGA
GGGGGAGGGGGGGCGTACTCAGATCGTGCATGGCCGTAGTCGTATAACCA
TAGACTCTGGCATGCTTACTATGCCGCAACGGAGTTCGTCGGGTTTTCAC
CGATCAGACAAGACATTAGGAATGGCGGGGGCGGGATTTGGAAAGCTCGG
ACGGAGTTCGGACGACAGGAGAAAGCGCGCGCGGTCGATTCTTGATTTTA
TATTTATATGACATGCATCTCGTCAATTGGCTCTGACCAATGCTTATTTT
TGTCAATTCCTTTGAATACGAGCAGTCCTACATGAAATGCGCCGGTGAGG
AGTATCTTGAGTTTGTGAGTTCTTTTTCTCTGAACGAACATTTTGGTTTT
CCCTTATGGGCGAGGGGGGCGTTGATGCCTGTCTTGGAGCCAGGGGCTTT
TGATAGATTCTAACGGTGAGTTGATGTGATAACAACAACAATACCACCAC
CATCAACATACCATCAAACAACGCATGAAACGAAAGAGCTATTACGGGAG
TCCATAGTGAATGAGACCAAATTTTGTTAGTAAAAATAGGAAAATATATA
GGTTTTTATGTATACCATAGGTCCTATTAACTATGGACCCCCGTAATAAC
AAAGTTTTTACTTAGCTGTCTCCCAAACGACAAGTGTGATGCTGAGACGT
GACGGCAACGGTGACCGTGCTCGTCGTTTTTCGTATTTCGCATGCATGTC
GTCTATATATATATATATATATTTCAAACAGGACGCGCGAGACCTGTACG
CGAAGATCAAGGATAAGCTGGACAAGGAGCAGTGGAACGCCGAGGACAAC
GAGGAGTACGAGGATGGAGAAGGGAACGTGCTGAACCGCCGCACTTACGA
AGACCTGGCACGCCAAGGCCTCATGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8814:8104..11581-

>mRNA_M-pyrifera_M_contig8814.20476.1 ID=mRNA_M-pyrifera_M_contig8814.20476.1|Name=mRNA_M-pyrifera_M_contig8814.20476.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig8814:8104..11581- (Macrocystis pyrifera P11B4 male)
CAGGTGAAGGCCCTTCTTGACCTTCAGGGAGACACGCTGGAGTCGACGAA
GCGACAGGTGGACAAGAAGCAGACGAGAACCGTCGAGGAGCGCGACCAAG
AGATAGAGGAGGAGGAGCAGGGAGCCCTCCCGGAGTTCAACGAGCAGGTG
AAGGCCCTTCTTGACCTTCAGGGAGACACGCTGGAGTCGACGAAGCGACA
GGTGGACAAGAAGCAGACGAGAACCGTCGAGGAGCGCGACCAAGAGATAG
AGGAGGAGGAGCAGGGAGCCCTCCCGGAGTTCAACGAGGAGGAAGATGAA
GAGAGCGACGAAGAAGGGCCTATTTACAACCCTCTCAACCTCCCTCTCGG
CTGGGATGGCAAGCCCATCCCCTACTGGCTGTACAAGCTGCACGGCCTTG
GGGTAGAGTTCAAGTGCGAGATCTGCGGCGACTTTAGCTACAAGGGTCGG
AGGAGGAAGATGAAGAGAGCGACGAAGAAGGGCCTATTTACAACCCTCTC
AACCTCCCTCTCGGCTGGGATGGCAAGCCCATCCCCTACTGGCTGTACAA
GCTGCACGGCCTTGGGGTAGAGTTCAAGTGCGAGATCTGCGGCGACTTTA
GCTACAAGGGTCGGAGGAACTTCGACCGACACTTCCAGGAGTGGCGCCAC
GCCCACGGCATGCGGTGCCTGGGAATACCGAACACGAAGCACTTCCACGA
CATCGTCCTCATCCAGGAACTTCGACCGACACTTCCAGGAGTGGCGCCAC
GCCCACGGCATGCGGTGCCTGGGAATACCGAACACGAAGCACTTCCACGA
CATCGTCCTCATCCAGGACGCGCGAGACCTGTACGCGAAGATCAAGGATA
AGCTGGACAAGGAGCAGTGGAACGCCGAGGACAACGAGGAGTACGAGGAT
GGAGAAGGGAACGTGCTGAACCGCCGCACTTACGAAGACCTGGCACGCCA
AGGCCTCATGTGAGACGCGCGAGACCTGTACGCGAAGATCAAGGATAAGC
TGGACAAGGAGCAGTGGAACGCCGAGGACAACGAGGAGTACGAGGATGGA
GAAGGGAACGTGCTGAACCGCCGCACTTACGAAGACCTGGCACGCCAAGG
CCTCATGTGA
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