prot_M-pyrifera_M_contig10981.2047.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig10981.2047.1
Unique Name	prot_M-pyrifera_M_contig10981.2047.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	158

Homology

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BLAST of mRNA_M-pyrifera_M_contig10981.2047.1 vs. uniprot
Match: D8LC34_ECTSI (Transmembrane protein 138 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC34_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 1.220e-61
Identity = 103/142 (72.54%), Postives = 114/142 (80.28%), Query Frame = 0

Query:    1 SSGGESFLFKVKLFAMVFLMCLDIGLNSSVEHETVDMCEGEFRDGTILAIILGFQLVVQGGIFGSLFLMMFETYPFRVGLMGMLTKQYLTVYAINVVYFFMTASVYGYRVTSMV-GAGCMGIWQVWDLRGYLPLSILHKLGE 141
            ++GG+S LF+VKLF MVFL  +D+ LNSSVEHET    +G  RDGT L +ILGFQLVVQ G F  LFLMMFETYPFRVGLMGMLT QYLTVY INV+YF  TA VYGYRV +MV G   MGIWQVWDLRGYLPLSI HK+GE
Sbjct:   11 TTGGDSILFRVKLFIMVFLTVVDMTLNSSVEHETFGTWDGTGRDGTALVLILGFQLVVQVGNFACLFLMMFETYPFRVGLMGMLTSQYLTVYVINVLYFVTTACVYGYRVAAMVQGEEGMGIWQVWDLRGYLPLSIFHKIGE 152

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BLAST of mRNA_M-pyrifera_M_contig10981.2047.1 vs. uniprot
Match: A0A6H5JIR8_9PHAE (Transmembrane protein 138 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR8_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 2.670e-60
Identity = 101/142 (71.13%), Postives = 113/142 (79.58%), Query Frame = 0

Query:    1 SSGGESFLFKVKLFAMVFLMCLDIGLNSSVEHETVDMCEGEFRDGTILAIILGFQLVVQGGIFGSLFLMMFETYPFRVGLMGMLTKQYLTVYAINVVYFFMTASVYGYRVTSMV-GAGCMGIWQVWDLRGYLPLSILHKLGE 141
            ++GG+  LF+VKLF MVFL  +D+ LNSSVEHET    +G  RDGT L +ILGFQLVVQ G F  LFLMMFETYPFRVGLMGMLT QYLTVY INV+YF  TA VYGYRV +MV G   MGIWQVWDLRGYLPLSI HK+G+
Sbjct:   11 TTGGDCILFRVKLFIMVFLTVVDMTLNSSVEHETFGTWDGTGRDGTALVLILGFQLVVQVGNFACLFLMMFETYPFRVGLMGMLTSQYLTVYIINVLYFVTTACVYGYRVAAMVQGEEGMGIWQVWDLRGYLPLSIFHKIGD 152

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BLAST of mRNA_M-pyrifera_M_contig10981.2047.1 vs. uniprot
Match: A0A836CBT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT6_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.370e-21
Identity = 58/156 (37.18%), Postives = 85/156 (54.49%), Query Frame = 0

Query:    1 SSGGESFLFKVKLFAMVFLMCLDIGLNSSVEHETVDMC--EGEFRD-GTILAIILGFQLVVQGGIFGSLFLMMFETYPFRVGLMGMLTKQYLTVYAINVVYFFMTASVYGYRVTSMVGAG------------CMGIWQVWDLRGYLPLSILHKLGE 141
            + GG    F+ KL  ++ LM  D+ LN SVE+++      +G   D  TIL ++ G QL+VQ  +  +LF+MMF+T+PF+ GLMG++   Y  VYA+N  Y   TA +YGYR+  ++G                  W  WD   Y+  SI+HKL E
Sbjct: 1286 AKGGADAWFQAKLTVLMLLMLADVLLNGSVEYDSYSQLTLDGGGDDVDTILVLVHGVQLLVQVAVLLTLFIMMFDTWPFKAGLMGLVAVHYKWVYAVNGAYITATALLYGYRLAKLIGTSGGXXXXXXXXXXXXXAWDPWDSGAYMAFSIMHKLDE 1441

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig10981.2047.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig10981.2047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LC34_ECTSI	1.220e-61	72.54	Transmembrane protein 138 n=1 Tax=Ectocarpus silic...	[more]
A0A6H5JIR8_9PHAE	2.670e-60	71.13	Transmembrane protein 138 n=1 Tax=Ectocarpus sp. C...	[more]
A0A836CBT6_9STRA	2.370e-21	37.18	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024133	Transmembrane protein 138	PFAM	PF14935	TMEM138	coord: 55..139 e-value: 1.7E-8 score: 35.2
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 89..108
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 69..88
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 109..158
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..45
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 46..68
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 7..26
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..6
None	No IPR available	TMHMM	TMhelix		coord: 7..26
None	No IPR available	TMHMM	TMhelix		coord: 46..68
None	No IPR available	TMHMM	TMhelix		coord: 88..110

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig10981	contig	M-pyrifera_M_contig10981:106..9271 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig10981.2047.1	mRNA_M-pyrifera_M_contig10981.2047.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig10981 106..9271 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig10981.2047.1 ID=prot_M-pyrifera_M_contig10981.2047.1|Name=mRNA_M-pyrifera_M_contig10981.2047.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp
SSGGESFLFKVKLFAMVFLMCLDIGLNSSVEHETVDMCEGEFRDGTILAI
ILGFQLVVQGGIFGSLFLMMFETYPFRVGLMGMLTKQYLTVYAINVVYFF
MTASVYGYRVTSMVGAGCMGIWQVWDLRGYLPLSILHKLGEHGTACSVPP
PPPPPPPP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024133	TM_138