mRNA_M-pyrifera_M_contig88115.20468.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88115.20468.1
Unique NamemRNA_M-pyrifera_M_contig88115.20468.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88115.20468.1 vs. uniprot
Match: A0A3D5DDJ6_9GAMM (DUF1302 domain-containing protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DDJ6_9GAMM)

HSP 1 Score: 479 bits (1234), Expect = 1.130e-166
Identity = 226/267 (84.64%), Postives = 242/267 (90.64%), Query Frame = 1
Query:    1 FGFDLTRNPNAGLKRVGSELGRRTNNGEFGGGLELFTPVRPCNVDSRGCIKDYMDFDEDDLMHPEFTDKHRWLRELYLDATLPFSNGDELNFRIGRQQVVWGRTDLFRVLDQINPIDFSIQNIYEEFEDSRIPLGIFNMEYRMGGVGVFSDLNFQFLWNFEEFQPHILGQGGQPYNILQAGDLFRALKNCWDNGCTVSNYASGLSPVGNLATDFPAQTIGIRNIHLPDG-HDQFGLRMEGVFKSVGFSINAAYYYSQLPSLRAGIPS 798
            FGF+   NPN GLK+VGSELG   N G FGGGLE  TP RPC++D RGCI  YMD DE+DL HPE TD++RWLRELYLDATLPF+NGDELNFRIGRQQVVWGRTDLFRVLDQINPIDFSIQNIYEEFEDSRIPLGIFNME+R+GGVG+FSDLNFQFLWNFEEF PH+LGQGGQPYNIL AGDLFR+LKNCWDNGCTV N+A+GLSPVGNL TDFPA TIGIRN+HLPDG  DQFGLRMEGVFKSVGFSINAAYYYSQLPSLRAGIPS
Sbjct:  139 FGFNTALNPNVGLKKVGSELGHTNNAGTFGGGLEFATPTRPCDIDPRGCIDGYMDMDENDLRHPELTDENRWLRELYLDATLPFANGDELNFRIGRQQVVWGRTDLFRVLDQINPIDFSIQNIYEEFEDSRIPLGIFNMEWRLGGVGMFSDLNFQFLWNFEEFTPHMLGQGGQPYNILLAGDLFRSLKNCWDNGCTVGNFANGLSPVGNLTTDFPANTIGIRNVHLPDGIGDQFGLRMEGVFKSVGFSINAAYYYSQLPSLRAGIPS 405          
BLAST of mRNA_M-pyrifera_M_contig88115.20468.1 vs. uniprot
Match: A0A523P241_9PROT (DUF1302 domain-containing protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P241_9PROT)

HSP 1 Score: 458 bits (1178), Expect = 3.020e-159
Identity = 211/255 (82.75%), Postives = 228/255 (89.41%), Query Frame = 1
Query:    1 FGFDLTRNPNAGLKRVGSELGRRTNNGEFGGGLELFTPVRPCNVDSRGCIKDYMDFDEDDLMHPEFTDKHRWLRELYLDATLPFSNGDELNFRIGRQQVVWGRTDLFRVLDQINPIDFSIQNIYEEFEDSRIPLGIFNMEYRMGGVGVFSDLNFQFLWNFEEFQPHILGQGGQPYNILQAGDLFRALKNCWDNGCTVSNYASGLSPVGNLATDFPAQTIGIRNIHLPDGHDQFGLRMEGVFKSVGFSINAAYYYS 765
            F FDL  NPNAGLK+VGSE G R NNGEFGGGLE FTPVRPCNVDSRGCI DYMD    DL +PEFTD+HRWLRELYLDATLP ++G E+NFRIGRQQVVWGRTDLFRVLD+INPIDFSIQNIYEEFEDSRIPLGIFNME+R+GG  +F DLNFQFLWNFE+F PH LGQGGQPYNILQAGDLFRAL NCW NGCTVSN+A+GL+P GNLATDFPA  IGIR +H PDGHDQFG+RMEGVFKSVGFS+NAAYYYS
Sbjct:  176 FAFDLGANPNAGLKKVGSEHGNRNNNGEFGGGLEFFTPVRPCNVDSRGCINDYMDATRGDLQNPEFTDEHRWLRELYLDATLPLADGQEINFRIGRQQVVWGRTDLFRVLDKINPIDFSIQNIYEEFEDSRIPLGIFNMEWRLGGTRIFDDLNFQFLWNFEDFTPHNLGQGGQPYNILQAGDLFRALNNCWHNGCTVSNFATGLTPTGNLATDFPAHVIGIRRVHRPDGHDQFGVRMEGVFKSVGFSVNAAYYYS 430          
BLAST of mRNA_M-pyrifera_M_contig88115.20468.1 vs. uniprot
Match: A0A1G0K2K4_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0K2K4_9GAMM)

HSP 1 Score: 350 bits (899), Expect = 2.820e-113
Identity = 178/294 (60.54%), Postives = 204/294 (69.39%), Query Frame = 1
Query:    4 GFDLTRNPNAGLKRVGSELGRRTNNGEFGGGLELFTPVRPCNVDSRGCIKDYMDFDEDDLMHPEFTDKHRWLRELYLDATLPFSNGDELNFRIGRQQVVWGRTDLFRVLDQINPIDFSIQNIYEEFEDSRIPLGIFNMEYRMGGVGVFSDLNFQFLWNFEEFQPHILGQGGQPYNILQAGDLFRALKNCWDNGCTVSNYA-----------------------------SGLSPVGNLATDFPAQTIGIRNIHLPD---GHDQFGLRMEGVFKSVGFSINAAYYYSQLPSLRAG 789
            GF L  NPN GL  +GSE    T      GG++L  P RPCN D RGCIKDYMD DEDDL  PEF ++  WLRE+Y+DAT+PF+NGDELN RIGRQQVVWGRTDLFRVLDQ+NPIDFSIQNIYEEFEDSRIP+GIF+ EYRMG  G F DLNFQF+W FE+F+PH LGQGGQPYNIL AG+LFRAL  CW+ GCTV N+A                             +GLS  G LAT FP QTIGI +  LPD    + + G R+EGVFK VGFS+N  Y++ QLPSL  G
Sbjct:  140 GFFLGTNPNEGLVILGSESFTATGGIPGFGGVQLAYPGRPCNEDPRGCIKDYMDADEDDLRFPEFNEQQDWLREIYVDATIPFANGDELNLRIGRQQVVWGRTDLFRVLDQVNPIDFSIQNIYEEFEDSRIPMGIFSSEYRMGATGAFDDLNFQFIWKFEKFRPHNLGQGGQPYNILDAGNLFRALSTCWNFGCTVGNFAPNATAALSFNPPFGPGAPALPHTPGGAFGNGLS-TGLLATTFPKQTIGIHDAILPDWELDNSEIGARLEGVFKGVGFSVNTLYFHQQLPSLHGG 432          
BLAST of mRNA_M-pyrifera_M_contig88115.20468.1 vs. uniprot
Match: A0A3M1RSZ6_9GAMM (DUF1302 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1RSZ6_9GAMM)

HSP 1 Score: 327 bits (838), Expect = 1.310e-104
Identity = 165/259 (63.71%), Postives = 191/259 (73.75%), Query Frame = 1
Query:   22 NPNAGLKRVGSELGRRTNNGEFGGGLELFTPVRPCNVDSRGCIKDYMDFDEDDLMHPEFTDKHRWLRELYLDATLPFSNGD-ELNFRIGRQQVVWGRTDLFRVLDQINPIDFSIQNIYEEFEDSRIPLGIFNMEYRMGGVGVFSDLNFQFLWNFEEFQPHILGQGGQPYNILQAGDLFRALKNCWDNGCTVSNYASGLSPVGNLATDFPAQTIGIRNIHLPDGHDQFGLRMEGVFKSVGFSINAAYYYSQLPSLRAGIP 795
            NPN GL+    +L      G   GG  L TPVRPCN+DSRGCIKDYMD D D+L   E TD   WLRELYL+AT+P   G  EL FRIGRQQVVWGRTDLFRVLD +NPIDF  QNIY EFEDSRIP GI N+EYR G   +F D+N Q L+ FE F+PH LGQGG+PY +L AG+LFRALKNC+DNGCTV N+     PV   A DFPA +IGIR++ +PDG ++FG R+EGVFK VGFS+NA Y+YSQ PSLR GIP
Sbjct:  169 NPNDGLRFAAEDL-----YGYGDGGTVLATPVRPCNIDSRGCIKDYMDRDLDELRFREITDDLDWLRELYLNATIPLKGGQHELAFRIGRQQVVWGRTDLFRVLDVVNPIDFGRQNIYAEFEDSRIPQGIVNIEYRFGATRLFEDINVQLLYKFERFRPHDLGQGGEPYAVLGAGNLFRALKNCYDNGCTVWNF-----PVTGTAVDFPAGSIGIRDVRIPDG-EEFGARIEGVFKGVGFSLNALYFYSQFPSLRGGIP 416          
BLAST of mRNA_M-pyrifera_M_contig88115.20468.1 vs. uniprot
Match: A0A1E2UUL2_9GAMM (DUF1302 domain-containing protein n=5 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1E2UUL2_9GAMM)

HSP 1 Score: 324 bits (831), Expect = 3.550e-104
Identity = 158/265 (59.62%), Postives = 192/265 (72.45%), Query Frame = 1
Query:    1 FGFDLTRNPNAGLKRVGSELGRRTNNGEFGGGLELFTPVRPCNVDSRGCIKDYMDFDEDDLMHPEFTDKHRWLRELYLDATLPFSNGDELNFRIGRQQVVWGRTDLFRVLDQINPIDFSIQNIYEEFEDSRIPLGIFNMEYRMGGVGVFSDLNFQFLWNFEEFQPHILGQGGQPYNILQAGDLFRALKNCWDNGCTVSNYASGLSPVGNLATDFPAQTIGIRNIHLPD---GHDQFGLRMEGVFKSVGFSINAAYYYSQLPSLRA 786
            FGFD T NPN G+  +G  L       +  GG+ L  PVRPC+VDSRGCI DY+DF+E +L +PEF D+  +LRE YLDATLP  N    NFR+GRQQVVWGRTDLFRVLD INP+D+S  NIY+E ED RIP+ +   EYRMG    F DLN QF+WNF++F+P+ LGQGG PY IL AG  FRA+KNCWDNGC+VSN+A G      L+TDFP   IGIR++HLPD    + QFGL++EG ++ VGFS+NA  Y SQLPSLRA
Sbjct:  125 FGFDTTENPNEGMVNLGHALH------DTDGGVGLGVPVRPCDVDSRGCIDDYLDFEESELKYPEFNDRLDFLREAYLDATLPTENAATWNFRLGRQQVVWGRTDLFRVLDVINPVDYSRHNIYDELEDIRIPMWMATGEYRMGATETFDDLNMQFVWNFDKFRPNNLGQGGTPYAILDAGSFFRAMKNCWDNGCSVSNFAGGA-----LSTDFPKHVIGIRDVHLPDWSLSNSQFGLKLEGDYQGVGFSLNALTYRSQLPSLRA 378          
BLAST of mRNA_M-pyrifera_M_contig88115.20468.1 vs. uniprot
Match: A0A2T6N5N0_9GAMM (DUF1302 domain-containing protein n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2T6N5N0_9GAMM)

HSP 1 Score: 325 bits (832), Expect = 3.810e-104
Identity = 156/264 (59.09%), Postives = 193/264 (73.11%), Query Frame = 1
Query:    1 FGFDLTRNPNAGLKRVGSELGRRTNNGEFGGGLELFTPVRPCNVDSRGCIKDYMDFDEDDLMHPEFTDKHRWLRELYLDATLPFSNGDELNFRIGRQQVVWGRTDLFRVLDQINPIDFSIQNIYEEFEDSRIPLGIFNMEYRMGGVGVFSDLNFQFLWNFEEFQPHILGQGGQPYNILQAGDLFRALKNCWDNGCTVSNYASGLSPVGNLATDFPAQTIGIRNIHLPD---GHDQFGLRMEGVFKSVGFSINAAYYYSQLPSLR 783
            FGFD  +NPN GL  +GS L       +  GG+ +  PVRPC+VDSRGCI DY+DFDE DL +PEF D+  +LRE YLDAT+P  +G   NFR+GRQQVVWGRTDLFRVLD INP+D+S  NIY+E ED RIP+ +   EYRMG    F DLN QF+WNF++F+P  LGQGG PY IL AG  FRA+KNCWDNGC+V+N+A G      L+TDFPA  IGIR++HLPD    + QFG+++EG ++ +GFS+NA  Y SQLPSLR
Sbjct:  141 FGFDTAQNPNEGLDNLGSALH------DTEGGVGMGVPVRPCDVDSRGCIDDYLDFDESDLKYPEFNDRLDFLREAYLDATMPTESGATWNFRLGRQQVVWGRTDLFRVLDVINPVDYSRHNIYDELEDIRIPMWMATGEYRMGATETFDDLNMQFVWNFDKFRPSSLGQGGTPYAILDAGSFFRAMKNCWDNGCSVANFAGGA-----LSTDFPAHVIGIRDVHLPDWSLSNSQFGIKLEGDYQGLGFSVNALTYRSQLPSLR 393          
BLAST of mRNA_M-pyrifera_M_contig88115.20468.1 vs. uniprot
Match: A0A6L3EMF7_9PROT (DUF1302 domain-containing protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6L3EMF7_9PROT)

HSP 1 Score: 314 bits (805), Expect = 1.820e-100
Identity = 156/260 (60.00%), Postives = 188/260 (72.31%), Query Frame = 1
Query:   22 NPNAGLKRVGSELGRRTNNGEFGGGLELFTPVRPCNVDSRGCIKDYMDFDEDDLMHPEFTDKHRWLRELYLDATLPFSNG-DELNFRIGRQQVVWGRTDLFRVLDQINPIDFSIQNIYEEFEDSRIPLGIFNMEYRMGGVGVFSDLNFQFLWNFEEFQPHILGQGGQPYNILQAGDLFRALKNCWDNGCTVSNYASGLSPVGNLATDFPAQTIGIRNIHLPDGHDQFGLRMEGVFKSVGFSINAAYYYSQLPSLRAGIPS 798
            NPN GL+   +++      G   GG+ L TPVRPC+VDSRGC  DY D  + DL + EF D   ++RELY+DA +P   G +EL  R+GRQQVVWGRTDLFRVLD +NP+DFS QN+Y EFEDSRIP+G+ N EYR G    F DLN QFLW FE+F+PH LGQGG+PY IL AG+ FRA  NCWDNGCTV N+     PV ++A +FPAQ IGIRN++ PD H + G R+EGVFK VGFS+NA YYYSQ PSLR GI S
Sbjct:  156 NPNQGLRLAAADV-----YGYQDGGVILATPVRPCDVDSRGCRADYFDKTKSDLEYREFNDDWDFIRELYIDAAIPLFRGRNELALRVGRQQVVWGRTDLFRVLDVVNPMDFSRQNLYAEFEDSRIPMGMVNAEYRFGATNWFEDLNVQFLWKFEKFRPHDLGQGGEPYAILGAGNFFRAFANCWDNGCTVGNF-----PVADVAVEFPAQAIGIRNVNRPD-HTEVGGRIEGVFKGVGFSLNALYYYSQFPSLRGGIES 404          
BLAST of mRNA_M-pyrifera_M_contig88115.20468.1 vs. uniprot
Match: UPI00197ECA7C (DUF1302 domain-containing protein n=1 Tax=Pseudomaricurvus alkylphenolicus TaxID=1306991 RepID=UPI00197ECA7C)

HSP 1 Score: 309 bits (792), Expect = 5.680e-98
Identity = 149/267 (55.81%), Postives = 191/267 (71.54%), Query Frame = 1
Query:    1 FGFDLTRNPNAGLKRVGSELGRRTNNGEFGGGLELFTPVRPCNVDSRGCIKDYMDFDEDDLMHPEFTDKHRWLRELYLDATLPFSNGDELNFRIGRQQVVWGRTDLFRVLDQINPIDFSIQNIYEEFEDSRIPLGIFNMEYRMGGVGVFSDLNFQFLWNFEEFQPHILGQGGQPYNILQAGDLFRALKNCWDNGCTVSNYASGLSPVGNLATDFPAQTIGIRNIHLPD---GHDQFGLRMEGVFKSVGFSINAAYYYSQLPSLRAGI 792
            FGFD + NPN GLK +G EL R  N     GG+ L  PVRPC+ DSRGCI DY+DFD D+L HPEF D+  ++RE Y+ A + F +G +L+  +G+QQV+WGRTDLFRVLD INP+D+S  NIY+E ED RIP+ I + EYR+G   +F DLNF  +WNF++F+P+ LGQGG PY IL AGD FR + NCW+NGC+V+N+A+     G LATDFPA TIGIR   +P     + Q GL++EG +K VGFS+NA  Y S LPSLR G+
Sbjct:  144 FGFDTSANPNEGLKLLGGEL-RGAN-----GGVGLAVPVRPCDKDSRGCIDDYLDFDSDELRHPEFNDRLDFIREAYVTADVNFDSGRQLSLSVGKQQVIWGRTDLFRVLDVINPVDYSRHNIYDELEDIRIPMWIAHAEYRLGSTEMFDDLNFSLVWNFDKFRPNNLGQGGSPYAILGAGDFFRGMANCWENGCSVANFAAH----GGLATDFPAHTIGIRKAEMPSWSLSNTQLGLKVEGEYKGVGFSLNALTYRSHLPSLRGGV 400          
BLAST of mRNA_M-pyrifera_M_contig88115.20468.1 vs. uniprot
Match: A0A2N5WXP8_9GAMM (DUF1302 domain-containing protein n=2 Tax=Pseudohalioglobus TaxID=2875235 RepID=A0A2N5WXP8_9GAMM)

HSP 1 Score: 309 bits (791), Expect = 6.910e-98
Identity = 151/271 (55.72%), Postives = 192/271 (70.85%), Query Frame = 1
Query:    1 FGFDLTRNPNAGLKRVGSELGRRTNNGEFGGGLELFTPVRPCNVDSRGC-IKDYMDFDEDDLMHPEFTDKHRWLRELYLDATLPFSNGDELNFRIGRQQVVWGRTDLFRVLDQINPIDFSIQNIYEEFEDSRIPLGIFNMEYRMGGVGVFSDLNFQFLWNFEEFQPHILGQGGQPYNILQAGDLFRALKNCWDNGCTVSNY----ASGLSPVGNLATDFPAQTIGIRNIHLPDGHDQFGLRMEGVFKSVGFSINAAYYYSQLPSLRAGIPS 798
            F FD++RNPN GLK +G ++          GG+ +  PVRPC+ DSRGC +KDYMD D +DL  PEF D+  ++RELY++ ++P  +  E  FR+G+QQVVWGRTDLFRVLD INP+DFS  NIY+E ED RIP  I   EYR G   +F DLN Q +WNF+EF+P+ LGQGG PY+IL AG  FRA+ NCW+NGCTVSN+    A GL   G ++ DF    IGIR ++LPDGHDQ G+++EGV+KSVGFS+N  +YY QLP LR  I S
Sbjct:  144 FLFDVSRNPNEGLKVLGEDMHDPM------GGVTIGVPVRPCDKDSRGCGLKDYMDHDTNDLRFPEFNDQLDFIRELYVEGSVPTGDMSEWFFRVGKQQVVWGRTDLFRVLDVINPVDFSRHNIYDELEDIRIPQWIATAEYRWGATEMFEDLNLQAVWNFDEFRPNALGQGGTPYSILDAGSFFRAMNNCWENGCTVSNFVPAGAIGLDDPGLISADFAPGVIGIRKVNLPDGHDQGGIKLEGVYKSVGFSLNYYHYYQQLPVLRGDIQS 408          
BLAST of mRNA_M-pyrifera_M_contig88115.20468.1 vs. uniprot
Match: UPI001E5E5DC6 (DUF1302 domain-containing protein n=1 Tax=Haliea alexandrii TaxID=2448162 RepID=UPI001E5E5DC6)

HSP 1 Score: 309 bits (791), Expect = 1.500e-97
Identity = 149/271 (54.98%), Postives = 192/271 (70.85%), Query Frame = 1
Query:    1 FGFDLTRNPNAGLKRVGSELGRRTNNGEFGGGLELFTPVRPCNVDSRGC-IKDYMDFDEDDLMHPEFTDKHRWLRELYLDATLPFSNGDELNFRIGRQQVVWGRTDLFRVLDQINPIDFSIQNIYEEFEDSRIPLGIFNMEYRMGGVGVFSDLNFQFLWNFEEFQPHILGQGGQPYNILQAGDLFRALKNCWDNGCTVSNY----ASGLSPVGNLATDFPAQTIGIRNIHLPDGHDQFGLRMEGVFKSVGFSINAAYYYSQLPSLRAGIPS 798
            F +D++ NPNAGLK +G ++           G+ +  PVRPC+ DSRGC ++DYMDFD +DL  PEF D+  ++RELY + ++P  +  E  FR+G+QQVVWGRTDLFRVLD INP+D+S QNIY+E ED RIP  I + EYR G    F DLN Q +WNF+EF+P+ LGQGG PY+IL AG  FRA+ NCW+NGCTVSN+    A GL   G +A DF    IGIRN++LP GHDQ G+++EGV+ SVGFS+N  ++Y QLP LR  IPS
Sbjct:  176 FLYDVSSNPNAGLKVLGEDMHAPM------AGVTIGVPVRPCDEDSRGCGLQDYMDFDTNDLRFPEFNDQLDFIRELYFEGSIPTGDMSEWFFRVGKQQVVWGRTDLFRVLDIINPVDYSRQNIYDELEDIRIPQWIASAEYRWGATETFDDLNLQLVWNFDEFRPNALGQGGTPYSILDAGSFFRAMNNCWENGCTVSNFVPAGAIGLDDPGLIAADFAPGVIGIRNVNLPSGHDQGGIKLEGVYNSVGFSLNYYHFYQQLPVLRGNIPS 440          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88115.20468.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DDJ6_9GAMM1.130e-16684.64DUF1302 domain-containing protein (Fragment) n=1 T... [more]
A0A523P241_9PROT3.020e-15982.75DUF1302 domain-containing protein (Fragment) n=1 T... [more]
A0A1G0K2K4_9GAMM2.820e-11360.54Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A3M1RSZ6_9GAMM1.310e-10463.71DUF1302 domain-containing protein n=1 Tax=Gammapro... [more]
A0A1E2UUL2_9GAMM3.550e-10459.62DUF1302 domain-containing protein n=5 Tax=Gammapro... [more]
A0A2T6N5N0_9GAMM3.810e-10459.09DUF1302 domain-containing protein n=4 Tax=Gammapro... [more]
A0A6L3EMF7_9PROT1.820e-10060.00DUF1302 domain-containing protein (Fragment) n=1 T... [more]
UPI00197ECA7C5.680e-9855.81DUF1302 domain-containing protein n=1 Tax=Pseudoma... [more]
A0A2N5WXP8_9GAMM6.910e-9855.72DUF1302 domain-containing protein n=2 Tax=Pseudoha... [more]
UPI001E5E5DC61.500e-9754.98DUF1302 domain-containing protein n=1 Tax=Haliea a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88115contigM-pyrifera_M_contig88115:24..821 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score305.4
Seed ortholog evalue2.5e-80
Seed eggNOG ortholog1220535.IMCC14465_18270
Hectar predicted targeting categoryother localisation
EggNOG OGs1QVI2@1224,28J5I@1,2Z91C@2
Best tax levelProteobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size798
Cds size798
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816790.724756-CDS-M-pyrifera_M_contig88115:23..8211622816790.724756-CDS-M-pyrifera_M_contig88115:23..821Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88115 24..821 +
1692278180.19101-CDS-M-pyrifera_M_contig88115:23..8211692278180.19101-CDS-M-pyrifera_M_contig88115:23..821Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88115 24..821 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88115.20468.1prot_M-pyrifera_M_contig88115.20468.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88115 24..821 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88115.20468.1

>prot_M-pyrifera_M_contig88115.20468.1 ID=prot_M-pyrifera_M_contig88115.20468.1|Name=mRNA_M-pyrifera_M_contig88115.20468.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=266bp
FGFDLTRNPNAGLKRVGSELGRRTNNGEFGGGLELFTPVRPCNVDSRGCI
KDYMDFDEDDLMHPEFTDKHRWLRELYLDATLPFSNGDELNFRIGRQQVV
WGRTDLFRVLDQINPIDFSIQNIYEEFEDSRIPLGIFNMEYRMGGVGVFS
DLNFQFLWNFEEFQPHILGQGGQPYNILQAGDLFRALKNCWDNGCTVSNY
ASGLSPVGNLATDFPAQTIGIRNIHLPDGHDQFGLRMEGVFKSVGFSINA
AYYYSQLPSLRAGIPS
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mRNA from alignment at M-pyrifera_M_contig88115:24..821+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88115.20468.1 ID=mRNA_M-pyrifera_M_contig88115.20468.1|Name=mRNA_M-pyrifera_M_contig88115.20468.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig88115:24..821+ (Macrocystis pyrifera P11B4 male)
TTCGGTTTCGATTTGACGCGCAACCCGAACGCGGGATTGAAACGGGTTGG CTCGGAACTCGGTCGCAGAACGAATAACGGCGAGTTCGGTGGTGGTCTCG AACTGTTTACGCCGGTTCGTCCCTGTAATGTCGACTCACGTGGTTGCATC AAGGACTACATGGATTTCGACGAAGACGATCTGATGCATCCCGAGTTCAC GGACAAGCATCGCTGGCTGCGTGAACTGTACCTCGATGCGACGTTACCGT TTTCGAATGGCGATGAACTGAACTTCCGCATCGGTCGTCAGCAGGTAGTG TGGGGACGCACGGATCTTTTCCGCGTGCTCGACCAGATCAATCCGATCGA CTTTTCGATTCAGAACATTTACGAGGAGTTCGAGGACAGCCGCATCCCGC TCGGCATCTTCAACATGGAATACCGCATGGGCGGGGTCGGTGTGTTTTCT GATTTGAACTTCCAGTTTCTGTGGAACTTCGAAGAGTTTCAGCCGCACAT CCTCGGCCAGGGCGGCCAGCCGTACAACATTCTGCAGGCGGGTGATTTGT TTCGCGCACTGAAGAATTGCTGGGATAACGGCTGTACCGTTTCGAACTAC GCGTCCGGGCTGTCGCCGGTGGGTAACCTGGCGACGGATTTCCCGGCGCA GACGATCGGGATCCGTAATATCCATTTGCCGGATGGCCATGACCAGTTCG GGCTGCGTATGGAAGGCGTGTTCAAAAGCGTCGGGTTTTCGATCAACGCC GCGTACTACTACTCGCAGCTACCGTCGCTGCGCGCCGGTATCCCGTCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88115:24..821+

>mRNA_M-pyrifera_M_contig88115.20468.1 ID=mRNA_M-pyrifera_M_contig88115.20468.1|Name=mRNA_M-pyrifera_M_contig88115.20468.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1596bp|location=Sequence derived from alignment at M-pyrifera_M_contig88115:24..821+ (Macrocystis pyrifera P11B4 male)
TTCGGTTTCGATTTGACGCGCAACCCGAACGCGGGATTGAAACGGGTTGG
CTCGGAACTCGGTCGCAGAACGAATAACGGCGAGTTCGGTGGTGGTCTCG
AACTGTTTACGCCGGTTCGTCCCTGTAATGTCGACTCACGTGGTTGCATC
AAGGACTACATGGATTTCGACGAAGACGATCTGATGCATCCCGAGTTCAC
GGACAAGCATCGCTGGCTGCGTGAACTGTACCTCGATGCGACGTTACCGT
TTTCGAATGGCGATGAACTGAACTTCCGCATCGGTCGTCAGCAGGTAGTG
TGGGGACGCACGGATCTTTTCCGCGTGCTCGACCAGATCAATCCGATCGA
CTTTTCGATTCAGAACATTTACGAGGAGTTCGAGGACAGCCGCATCCCGC
TCGGCATCTTCAACATGGAATACCGCATGGGCGGGGTCGGTGTGTTTTCT
GATTTGAACTTCCAGTTTCTGTGGAACTTCGAAGAGTTTCAGCCGCACAT
CCTCGGCCAGGGCGGCCAGCCGTACAACATTCTGCAGGCGGGTGATTTGT
TTCGCGCACTGAAGAATTGCTGGGATAACGGCTGTACCGTTTCGAACTAC
GCGTCCGGGCTGTCGCCGGTGGGTAACCTGGCGACGGATTTCCCGGCGCA
GACGATCGGGATCCGTAATATCCATTTGCCGGATGGCCATGACCAGTTCG
GGCTGCGTATGGAAGGCGTGTTCAAAAGCGTCGGGTTTTCGATCAACGCC
GCGTACTACTACTCGCAGCTACCGTCGCTGCGCGCCGGTATCCCGTCGTT
CGGTTTCGATTTGACGCGCAACCCGAACGCGGGATTGAAACGGGTTGGCT
CGGAACTCGGTCGCAGAACGAATAACGGCGAGTTCGGTGGTGGTCTCGAA
CTGTTTACGCCGGTTCGTCCCTGTAATGTCGACTCACGTGGTTGCATCAA
GGACTACATGGATTTCGACGAAGACGATCTGATGCATCCCGAGTTCACGG
ACAAGCATCGCTGGCTGCGTGAACTGTACCTCGATGCGACGTTACCGTTT
TCGAATGGCGATGAACTGAACTTCCGCATCGGTCGTCAGCAGGTAGTGTG
GGGACGCACGGATCTTTTCCGCGTGCTCGACCAGATCAATCCGATCGACT
TTTCGATTCAGAACATTTACGAGGAGTTCGAGGACAGCCGCATCCCGCTC
GGCATCTTCAACATGGAATACCGCATGGGCGGGGTCGGTGTGTTTTCTGA
TTTGAACTTCCAGTTTCTGTGGAACTTCGAAGAGTTTCAGCCGCACATCC
TCGGCCAGGGCGGCCAGCCGTACAACATTCTGCAGGCGGGTGATTTGTTT
CGCGCACTGAAGAATTGCTGGGATAACGGCTGTACCGTTTCGAACTACGC
GTCCGGGCTGTCGCCGGTGGGTAACCTGGCGACGGATTTCCCGGCGCAGA
CGATCGGGATCCGTAATATCCATTTGCCGGATGGCCATGACCAGTTCGGG
CTGCGTATGGAAGGCGTGTTCAAAAGCGTCGGGTTTTCGATCAACGCCGC
GTACTACTACTCGCAGCTACCGTCGCTGCGCGCCGGTATCCCGTCG
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