mRNA_M-pyrifera_M_contig88045.20457.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig88045.20457.1
Unique NamemRNA_M-pyrifera_M_contig88045.20457.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig88045.20457.1 vs. uniprot
Match: A0A250WYA2_9CHLO (ATP-dependent DNA helicase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WYA2_9CHLO)

HSP 1 Score: 233 bits (594), Expect = 8.900e-68
Identity = 136/277 (49.10%), Postives = 177/277 (63.90%), Query Frame = 1
Query:    1 FAVCCAGGGKSLCFQLPALLLPGVSIVVTPLLSLMQDQVSQLVH----GLGIPATYLSGEQKFADVEAVYRELEAESGPTCKLLYVTPEKLACLSEEGGXXXGARLRGILGRLHERGLLSRLVVDEAHCISSWGHDFRQSYRKLGLFHGLFPMLPTIAVTATATSAVLSDVQKSLGLGGEGRRVKVFRTSFNRRNLLLSVREKP------SKPKQAMEALATLLRRRFPRGSGIVYCMTREESEKVAVFLRFQKGIAADVYHAGMTPLQKAQVQRLW 801
            F +   GGGKSLC+QLPA++  GV++VV PLLSLMQDQV  L      G G+PATY+S +Q   ++ AV REL   SGPTCKLLYVTPE+L              L  IL +L++ GLL+RLVVDEAHC+SSWGHDFR  Y++LG     +P +P +AVTATAT  V  D+ K+LG+     + + F+ SF R+NL LSV++K        +P+ A   L  +L +     SGIVYC++REESE V+  L   +GI A  YHAGMTP Q+ +VQ  W
Sbjct:  264 FVLMPTGGGKSLCYQLPAVVSKGVTVVVCPLLSLMQDQVRSLCSLPTCG-GVPATYISSQQSKVELLAVLRELSKPSGPTCKLLYVTPEQLV---------KSTSLNSILSKLYQAGLLARLVVDEAHCVSSWGHDFRPDYKQLGKIRSCYPSVPIMAVTATATDHVADDILKTLGMS----KARTFKASFFRKNLHLSVKDKTYGEDEEGRPQPASMLLDYILEQ-GSHASGIVYCLSREESELVSGLL-VSEGIKAAYYHAGMTPKQRMEVQNAW 524          
BLAST of mRNA_M-pyrifera_M_contig88045.20457.1 vs. uniprot
Match: A0A5A8DP96_CAFRO (ATP-dependent DNA helicase n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DP96_CAFRO)

HSP 1 Score: 225 bits (574), Expect = 6.400e-67
Identity = 138/289 (47.75%), Postives = 174/289 (60.21%), Query Frame = 1
Query:   19 GGGKSLCFQLPALLLPGVSIVVTPLLSLMQDQVSQLVHGL-----GIPATYLSGEQKFADVEAVYRELE-----------------AESGPT----CKLLYVTPEKLACLSEEGGXXXGARLRGILGRLHERGLLSRLVVDEAHCISSWGHDFRQSYRKLGLFHGLFPMLPTIAVTATATSAVLSDVQKSLGLGGEGRRVKVFRTSFNRRNLLLSVREKPSKPKQAMEALATLL-RRRFPRGSGIVYCMTREESEKVAVFLRFQKGIAADVYHAGMTPLQKAQVQRLWQ 804
            G GKSLCF L A + PGV+IVV+PLLSL+QDQV  LV G      GIPA YLS EQ  AD  A+  +L                  A  GP     CK+L+VTPE+L   S        A L  +L +LH  GLL+R+VVDE HC+S WGHDFR +YR+LG     FP  P +A+TATAT  V+ D++ SL +  +     V    FNR NL   VR KP     A++A+  L+ R R P   GIVYC++R+E+E+VA FL+ + G++AD YHAGMTPLQK  VQRLWQ
Sbjct:   44 GAGKSLCFGLTACMSPGVTIVVSPLLSLIQDQVVHLVRGTASVCGGIPAAYLSSEQTEADCRALLFDLHRSADAAMERLPGGVPGGAADGPAPFCDCKVLFVTPERLCGAS--------AGLDAVLRKLHAGGLLARIVVDECHCVSQWGHDFRPAYRQLGSLRSRFPGTPVMALTATATPRVVEDIKSSLAMRAD---TAVVVNDFNRPNLRYEVRPKPDGKAAALQAVLDLVTRERRPTDIGIVYCLSRDETEEVASFLK-RGGVSADQYHAGMTPLQKQTVQRLWQ 320          
BLAST of mRNA_M-pyrifera_M_contig88045.20457.1 vs. uniprot
Match: A0A8K1CM96_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CM96_PYTOL)

HSP 1 Score: 226 bits (576), Expect = 8.530e-67
Identity = 130/271 (47.97%), Postives = 172/271 (63.47%), Query Frame = 1
Query:    1 FAVCCAGGGKSLCFQLPALLLPGVSIVVTPLLSLMQDQVSQLVH--GLGIPATYLSGEQKFADVEAVYRELEAESGPTCKLLYVTPEKLACLSEEGGXXXGARLRGILGRLHERGLLSRLVVDEAHCISSWGHDFRQSYRKLGLFHGLFPMLPTIAVTATATSAVLSDVQKSLGLGGEGRRVKVFRTSFNRRNLLLSVREKPSKPKQAMEALATLLRRRFPRGS-GIVYCMTREESEKVAVFLRFQKGIAADVYHAGMTPLQKAQVQRLWQ 804
            F +   GGGKSLC+QLPA+L PGV+IVV+PLLSL+QDQV+ L+   G GIPA +LS +       A+ REL     P+ KLLYVTPEK+A  SEE        +  ++  LH  G+L+R V+DEAHC+S WGHDFR  Y KLG+    FP +P +A+TATA   V+  VQ+SL +     + K+F  +FNR NL   VREKP    +A+E L  +L   F +   GIVYCMT++E E VA +L F +G++AD YHAG +   +  VQ  WQ
Sbjct:  180 FVLMPTGGGKSLCYQLPAVLSPGVTIVVSPLLSLIQDQVTALIRNRGCGIPAAFLSSQTSMTLKRAIVRELRRPR-PSLKLLYVTPEKIA-KSEE--------MMELMQILHSNGMLARFVIDEAHCVSQWGHDFRPDYSKLGILKATFPEVPLMALTATAPPKVIQGVQRSLKIS----KAKIFSMNFNRPNLAFEVREKPMPEAKALETLYQVLTTEFRKEDVGIVYCMTKQECEDVANYL-FDRGVSADFYHAGQSNTDRQLVQEAWQ 435          
BLAST of mRNA_M-pyrifera_M_contig88045.20457.1 vs. uniprot
Match: A0A5D6YCC8_9STRA (ATP-dependent DNA helicase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCC8_9STRA)

HSP 1 Score: 226 bits (575), Expect = 2.720e-66
Identity = 132/271 (48.71%), Postives = 170/271 (62.73%), Query Frame = 1
Query:    1 FAVCCAGGGKSLCFQLPALLLPGVSIVVTPLLSLMQDQVSQLVHG--LGIPATYLSGEQKFADVEAVYRELEAESGPTCKLLYVTPEKLACLSEEGGXXXGARLRGILGRLHERGLLSRLVVDEAHCISSWGHDFRQSYRKLGLFHGLFPMLPTIAVTATATSAVLSDVQKSLGLGGEGRRVKVFRTSFNRRNLLLSVREKPSKPKQAMEALATLLRRRFPRGS-GIVYCMTREESEKVAVFLRFQKGIAADVYHAGMTPLQKAQVQRLWQ 804
            F +   GGGKSLC+QLPA+L PGV+IVV+PLLSL+QDQV+ L+     GIPA YLS +       A+ +EL  +  P+ KLLYVTPEKL            A +  +L  LH  G+L+R V+DEAHC+S WGHDFR  Y KLGL    FP +P +A+TATA   V+  VQKSL +     R  VF  +FNR NL   V +KP + ++A+EAL  L++  FP  + GIVYCMT++E E VA FL F  G+ AD YHAG +   +  VQ  WQ
Sbjct:  210 FVLMPTGGGKSLCYQLPAVLTPGVTIVVSPLLSLIQDQVTALIRNQQCGIPAGYLSSQTGITLRRAIVQELRRKR-PSLKLLYVTPEKLG---------NSAEMIDLLELLHGNGMLARFVIDEAHCVSQWGHDFRPDYMKLGLLKTRFPDVPLMALTATAPPKVIQGVQKSLKIA----RGLVFSMNFNRTNLTFEVLDKPLQERKALEALLALIKASFPADAVGIVYCMTKQECEDVANFL-FDHGVRADFYHAGQSNTDRQMVQEAWQ 465          
BLAST of mRNA_M-pyrifera_M_contig88045.20457.1 vs. uniprot
Match: A0A2D4CBX1_PYTIN (ATP-dependent DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBX1_PYTIN)

HSP 1 Score: 224 bits (570), Expect = 1.540e-65
Identity = 131/266 (49.25%), Postives = 171/266 (64.29%), Query Frame = 1
Query:   19 GGGKSLCFQLPALLLPGVSIVVTPLLSLMQDQVSQLVHG--LGIPATYLSGEQKFADVEAVYRELEAESGPTCKLLYVTPEKLACLSEEGGXXXGARLRGILGRLHERGLLSRLVVDEAHCISSWGHDFRQSYRKLGLFHGLFPMLPTIAVTATATSAVLSDVQKSLGLGGEGRRVKVFRTSFNRRNLLLSVREKPSKPKQAMEALATLLRRRFPRGS-GIVYCMTREESEKVAVFLRFQKGIAADVYHAGMTPLQKAQVQRLWQR 807
            GGGKSLC+QLPA+L PGV+IVV+PLLSL+QDQV+ L+     GIPA +LS +       A+ REL     PT KLLYVTPEK+A  SEE        +  ++  L+  G+L+R V+DEAHC+S WGHDFR  Y KLGL    FP +P +A+TATA   V+  VQ+SL +    R  K+F  SFNR NL   VREKP +  +A+EAL  ++   F   + GIVYCMT++E E VA +L F +G+ AD YHAG +   +  VQ  WQ+
Sbjct:  202 GGGKSLCYQLPAVLSPGVTIVVSPLLSLIQDQVTALIRNPLCGIPAAFLSSQTGITLHRAIARELRGRF-PTLKLLYVTPEKIA-KSEE--------MMSLMQGLYANGMLARFVIDEAHCVSQWGHDFRPDYSKLGLLKDEFPDVPLMALTATAPPKVIQGVQRSLKI----RNAKIFSMSFNRPNLSFEVREKPLQEAKALEALHQVISTEFQESAVGIVYCMTKQECEDVANYL-FDRGVRADFYHAGQSNGDRQLVQEAWQQ 452          
BLAST of mRNA_M-pyrifera_M_contig88045.20457.1 vs. uniprot
Match: G4Z2Z7_PHYSP (ATP-dependent DNA helicase n=2 Tax=Phytophthora TaxID=4783 RepID=G4Z2Z7_PHYSP)

HSP 1 Score: 216 bits (549), Expect = 1.680e-64
Identity = 124/272 (45.59%), Postives = 171/272 (62.87%), Query Frame = 1
Query:    1 FAVCCAGGGKSLCFQLPALLLPGVSIVVTPLLSLMQDQVSQLVH--GLGIPATYLSGEQKFADVEAVYRELEAESGPTCKLLYVTPEKLACLSEEGGXXXGARLRGILGRLHERGLLSRLVVDEAHCISSWGHDFRQSYRKLGLFHGLFPMLPTIAVTATATSAVLSDVQKSLGLGGEGRRVKVFRTSFNRRNLLLSVREKP-SKPKQAMEALATLLRRRFPRGS-GIVYCMTREESEKVAVFLRFQKGIAADVYHAGMTPLQKAQVQRLWQ 804
            F +   GGGKSLC+QLPA+L PGV+IVV+PLLSL+QDQV+ L+   G GIPA +L+ +       ++  EL     P+ KLLY+TPEK+            A +  +L  L+   +L+R V+DEAHC+S WGHDFR  Y +LG+    FP +P +A+TATA   V+  VQ+SL +        VF  SFNR+NL   VR+KP     +AMEAL  L+ + +PR + GIVYCMT+++SE VA +L F +G++AD YHAG +   +  VQ  WQ
Sbjct:    7 FVLMPTGGGKSLCYQLPAVLSPGVTIVVSPLLSLIQDQVTALIQNPGCGIPAAFLTSQTALTLKRSITAELRRPV-PSLKLLYLTPEKIV---------KSAEMADLLQTLYRNKMLARFVIDEAHCVSQWGHDFRPEYSQLGMLKKTFPNVPLMALTATAPPKVIQGVQRSLKISNG----PVFSMSFNRQNLTFEVRDKPLGSDVKAMEALYELISKTYPRDAVGIVYCMTKQDSEDVANYL-FDRGLSADFYHAGQSATDRHMVQEAWQ 263          
BLAST of mRNA_M-pyrifera_M_contig88045.20457.1 vs. uniprot
Match: A0A067CY79_SAPPC (ATP-dependent DNA helicase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CY79_SAPPC)

HSP 1 Score: 216 bits (550), Expect = 2.730e-64
Identity = 128/272 (47.06%), Postives = 170/272 (62.50%), Query Frame = 1
Query:    1 FAVCCAGGGKSLCFQLPALLLPGVSIVVTPLLSLMQDQVSQLVHG--LGIPATYLSGEQKFADVEAVYRELEAESGPTCKLLYVTPEKLACLSEEGGXXXGARLRGILGRLHERGLLSRLVVDEAHCISSWGHDFRQSYRKLGLFHGLFPMLPTIAVTATATSAVLSDVQKSLGLGGEGRRVKVFRTSFNRRNLLLSVREKPSKPKQAMEALATLLRRRFPRGS-GIVYCMTREESEKVAVFLRFQKGIAADVYHAGMTPLQKAQVQRLWQR 807
            F +   GGGKSLC+QLPA+L PG++IVV+PLL   QDQV+ LV    +GIPA +LS +      +A++R+L     PT KLLYVTPE+LA             L  +L  LH+R +L+R VVDEAHC+SSWGHDFR  Y KLG    LFP +P +A+TATA   V+ +V+K L +     R  +F  SFNR NL   V EK  +  +A+EAL   ++ ++     GIVYCMT+++SE VA +L F +GI AD YHAG +   +  VQ  WQR
Sbjct:   45 FVLMPTGGGKSLCYQLPAVLSPGITIVVSPLLXXXQDQVTXLVRNQPVGIPAAFLSSQTLAKLKKAIWRDLHRPV-PTLKLLYVTPERLAASDS---------LIQVLQSLHQRKMLARFVVDEAHCVSSWGHDFRPDYHKLGNLKDLFPTVPMMALTATAPQKVIENVKKVLKIP----RATIFSMSFNRTNLAFEVIEKDPEEGKALEALFKYIKTKYDNSVVGIVYCMTKQQSEDVANYL-FDRGILADFYHAGQSSSDRELVQDAWQR 301          
BLAST of mRNA_M-pyrifera_M_contig88045.20457.1 vs. uniprot
Match: A0A6G0XAI7_9STRA (ATP-dependent DNA helicase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XAI7_9STRA)

HSP 1 Score: 215 bits (548), Expect = 5.840e-64
Identity = 127/271 (46.86%), Postives = 169/271 (62.36%), Query Frame = 1
Query:    1 FAVCCAGGGKSLCFQLPALLLPGVSIVVTPLLSLMQDQVSQLVHG--LGIPATYLSGEQKFADVEAVYRELEAESGPTCKLLYVTPEKLACLSEEGGXXXGARLRGILGRLHERGLLSRLVVDEAHCISSWGHDFRQSYRKLGLFHGLFPMLPTIAVTATATSAVLSDVQKSLGLGGEGRRVKVFRTSFNRRNLLLSVREKPSKPKQAMEALATLLRRRFPRGS-GIVYCMTREESEKVAVFLRFQKGIAADVYHAGMTPLQKAQVQRLWQ 804
            F +   GGGKSLC+QLPA+L  G+++VV+PLLSL+QDQV+ LV     GIPA YLS +     ++AV+++L     PT KLLYVTPEKLA  S          L  +L  L+ RG+L+R V+DEAHC++ WGHDFR  Y KLG    LFP +P +A+TATA   V+  V+K L +     R  +F  SFNR NL  SV EK S+  +A+  L + +   +     GIVYCMT+++SE VA +L F +GI AD YHAG +   +  VQ  WQ
Sbjct:   48 FVLMPTGGGKSLCYQLPAVLSNGITVVVSPLLSLIQDQVTSLVRNRPAGIPAAYLSSQTAQKLIKAVWKDLHRPV-PTIKLLYVTPEKLAASSS---------LIAMLEDLNRRGMLARFVIDEAHCVTQWGHDFRPDYNKLGRLKELFPDVPVMALTATAPQKVIDSVKKILKIP----RATIFSMSFNRSNLSFSVIEKESEEPKALAQLYSYISSNYSNNVVGIVYCMTKQQSEDVANYL-FDRGIQADFYHAGQSSTDREMVQEAWQ 303          
BLAST of mRNA_M-pyrifera_M_contig88045.20457.1 vs. uniprot
Match: A0A2D4CC22_PYTIN (DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CC22_PYTIN)

HSP 1 Score: 224 bits (571), Expect = 4.290e-63
Identity = 132/272 (48.53%), Postives = 173/272 (63.60%), Query Frame = 1
Query:    1 FAVCCAGGGKSLCFQLPALLLPGVSIVVTPLLSLMQDQVSQLVHG--LGIPATYLSGEQKFADVEAVYRELEAESGPTCKLLYVTPEKLACLSEEGGXXXGARLRGILGRLHERGLLSRLVVDEAHCISSWGHDFRQSYRKLGLFHGLFPMLPTIAVTATATSAVLSDVQKSLGLGGEGRRVKVFRTSFNRRNLLLSVREKPSKPKQAMEALATLLRRRFPRGS-GIVYCMTREESEKVAVFLRFQKGIAADVYHAGMTPLQKAQVQRLWQR 807
            F +   GGGKSLC+QLPA+L PGV+IVV+PLLSL+QDQV+ L+     GIPA +LS +       A+ REL     PT KLLYVTPEK+A  SEE        +  ++  L+  G+L+R V+DEAHC+S WGHDFR  Y KLGL    FP +P +A+TATA   V+  VQ+SL +    R  K+F  SFNR NL   VREKP +  +A+EAL  ++   F   + GIVYCMT++E E VA +L F +G+ AD YHAG +   +  VQ  WQ+
Sbjct: 1987 FVLMPTGGGKSLCYQLPAVLSPGVTIVVSPLLSLIQDQVTALIRNPLCGIPAAFLSSQTGITLHRAIARELRGRF-PTLKLLYVTPEKIA-KSEE--------MMSLMQGLYANGMLARFVIDEAHCVSQWGHDFRPDYSKLGLLKDEFPDVPLMALTATAPPKVIQGVQRSLKI----RNAKIFSMSFNRPNLSFEVREKPLQEAKALEALHQVIXTEFQESAVGIVYCMTKQECEDVANYL-FDRGVRADFYHAGQSNGDRQLVQEAWQQ 2243          
BLAST of mRNA_M-pyrifera_M_contig88045.20457.1 vs. uniprot
Match: A0A8J4B3J3_9CHLO (ATP-dependent DNA helicase n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B3J3_9CHLO)

HSP 1 Score: 222 bits (565), Expect = 4.330e-63
Identity = 129/275 (46.91%), Postives = 174/275 (63.27%), Query Frame = 1
Query:    1 FAVCCAGGGKSLCFQLPALLLPGVSIVVTPLLSLMQDQVSQLVH--GLGIPATYLSGEQKFADVEAVYRELEAESGPTCKLLYVTPEKLACLSEEGGXXXGARLRGILGRLHERGLLSRLVVDEAHCISSWGHDFRQSYRKLGLFHGLFPMLPTIAVTATATSAVLSDVQKSLGLGGEGRRVKVFRTSFNRRNLLLSVREKPS------KPKQAMEALATLLRRRFPRGSGIVYCMTREESEKVAVFLRFQKGIAADVYHAGMTPLQKAQVQRLW 801
            F +   GGGKSLC+QLPA++ PG+++VV PLLSL+QDQV  L    G G+PAT+LS +Q   +V +V REL  E  P+CKLLY+TPE L           G R++ +L RLH+RG L+R V+DEAHC+S+WGHDFR  Y +LG+    +  +P +A+TATAT  V  D+ + L +    R   +F+TSF+R NL   V +KP+      KP   ME L   + ++    SGIVYC++RE+ E VA +L    GI A  YHAGMTP Q+ QVQ  W
Sbjct:  230 FVLMPTGGGKSLCYQLPAVVSPGITVVVCPLLSLLQDQVRALCSQSGGGVPATFLSSQQTQDEVISVLRELRKER-PSCKLLYLTPEALV---------KGNRIKDLLDRLHQRGRLARFVIDEAHCVSTWGHDFRPDYAQLGILKERYQRVPIMALTATATEEVKKDILRKLSID---RTATIFKTSFHRPNLDFIVYDKPTGNTADGKPAD-MEMLVAHITQKGVNTSGIVYCLSREDCEDVARYLN-DSGIRAAHYHAGMTPKQRTQVQNKW 489          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88045.20457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A250WYA2_9CHLO8.900e-6849.10ATP-dependent DNA helicase n=1 Tax=Chlamydomonas e... [more]
A0A5A8DP96_CAFRO6.400e-6747.75ATP-dependent DNA helicase n=4 Tax=Cafeteria roenb... [more]
A0A8K1CM96_PYTOL8.530e-6747.97Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6YCC8_9STRA2.720e-6648.71ATP-dependent DNA helicase n=1 Tax=Pythium brassic... [more]
A0A2D4CBX1_PYTIN1.540e-6549.25ATP-dependent DNA helicase n=1 Tax=Pythium insidio... [more]
G4Z2Z7_PHYSP1.680e-6445.59ATP-dependent DNA helicase n=2 Tax=Phytophthora Ta... [more]
A0A067CY79_SAPPC2.730e-6447.06ATP-dependent DNA helicase n=2 Tax=Saprolegnia Tax... [more]
A0A6G0XAI7_9STRA5.840e-6446.86ATP-dependent DNA helicase n=1 Tax=Aphanomyces eut... [more]
A0A2D4CC22_PYTIN4.290e-6348.53DNA helicase n=1 Tax=Pythium insidiosum TaxID=1147... [more]
A0A8J4B3J3_9CHLO4.330e-6346.91ATP-dependent DNA helicase n=1 Tax=Volvox africanu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88045contigM-pyrifera_M_contig88045:2..808 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score223.4
Seed ortholog evalue1.3e-55
Seed eggNOG ortholog115417.EPrPW00000017316
KEGG koko:K10900,ko:K10901
KEGG Pathwayko03440,ko03460,map03440,map03460
KEGG ModuleM00295,M00414
Hectar predicted targeting categorysignal peptide
GOsGO:0000724,GO:0000725,GO:0001101,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009266,GO:0009378,GO:0009409,GO:0009414,GO:0009415,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0010035,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031668,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0042221,GO:0042623,GO:0042631,GO:0043138,GO:0043140,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0070417,GO:0070887,GO:0071103,GO:0071214,GO:0071229,GO:0071462,GO:0071496,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0104004,GO:0140097,GO:1901360,GO:1901363,GO:1901700,GO:1901701
EggNOG free text desc.Bloom syndrome protein, DEAD DEAH box helicase. Source PGD
EggNOG OGs1MFQW@121069,COG0514@1,KOG0351@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Exons1
Model size807
Cds size807
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816790.1891866-CDS-M-pyrifera_M_contig88045:1..8081622816790.1891866-CDS-M-pyrifera_M_contig88045:1..808Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88045 2..808 -
1692278179.8929775-CDS-M-pyrifera_M_contig88045:1..8081692278179.8929775-CDS-M-pyrifera_M_contig88045:1..808Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig88045 2..808 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88045.20457.1prot_M-pyrifera_M_contig88045.20457.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig88045 2..808 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig88045.20457.1

>prot_M-pyrifera_M_contig88045.20457.1 ID=prot_M-pyrifera_M_contig88045.20457.1|Name=mRNA_M-pyrifera_M_contig88045.20457.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=269bp
FAVCCAGGGKSLCFQLPALLLPGVSIVVTPLLSLMQDQVSQLVHGLGIPA
TYLSGEQKFADVEAVYRELEAESGPTCKLLYVTPEKLACLSEEGGGGGGA
RLRGILGRLHERGLLSRLVVDEAHCISSWGHDFRQSYRKLGLFHGLFPML
PTIAVTATATSAVLSDVQKSLGLGGEGRRVKVFRTSFNRRNLLLSVREKP
SKPKQAMEALATLLRRRFPRGSGIVYCMTREESEKVAVFLRFQKGIAADV
YHAGMTPLQKAQVQRLWQR
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mRNA from alignment at M-pyrifera_M_contig88045:2..808-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig88045.20457.1 ID=mRNA_M-pyrifera_M_contig88045.20457.1|Name=mRNA_M-pyrifera_M_contig88045.20457.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=807bp|location=Sequence derived from alignment at M-pyrifera_M_contig88045:2..808- (Macrocystis pyrifera P11B4 male)
TTTGCGGTGTGTTGTGCAGGTGGAGGCAAGTCTTTGTGTTTCCAGCTGCC TGCATTGCTGCTTCCTGGGGTGTCGATCGTAGTGACGCCGTTGTTGTCGC TGATGCAAGACCAGGTGTCGCAGCTTGTGCATGGCCTGGGCATCCCTGCG ACGTACCTGAGCGGGGAGCAGAAGTTCGCAGACGTGGAGGCAGTGTATCG GGAGCTAGAGGCAGAAAGCGGTCCCACGTGCAAACTCCTTTACGTAACCC CCGAAAAGTTGGCCTGTTTGTCTGAGGAGGGAGGAGGAGGGGGAGGGGCG CGGCTGAGGGGGATTCTGGGCAGGCTGCATGAGAGGGGTTTGTTGTCGAG GCTGGTGGTGGATGAGGCGCATTGCATTTCGTCGTGGGGCCACGATTTCC GACAGTCCTACCGCAAATTGGGTCTGTTCCACGGGCTCTTCCCGATGCTG CCCACGATCGCAGTGACCGCGACTGCCACAAGCGCTGTCTTGTCGGATGT GCAAAAGAGTTTGGGATTGGGTGGGGAAGGGAGGCGGGTGAAAGTGTTTC GGACATCGTTCAACCGCAGAAACTTGCTCTTGTCGGTGCGAGAAAAGCCT TCAAAGCCCAAGCAGGCCATGGAAGCACTGGCAACGCTGCTGCGACGCAG GTTTCCTCGAGGCAGTGGGATTGTGTACTGTATGACGCGGGAGGAGAGCG AGAAAGTGGCGGTGTTTCTGCGGTTTCAAAAAGGAATTGCCGCCGACGTC TACCATGCCGGGATGACCCCTCTGCAGAAAGCACAGGTGCAGCGGCTGTG GCAGCGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig88045:2..808-

>mRNA_M-pyrifera_M_contig88045.20457.1 ID=mRNA_M-pyrifera_M_contig88045.20457.1|Name=mRNA_M-pyrifera_M_contig88045.20457.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1614bp|location=Sequence derived from alignment at M-pyrifera_M_contig88045:2..808- (Macrocystis pyrifera P11B4 male)
TTTGCGGTGTGTTGTGCAGGTGGAGGCAAGTCTTTGTGTTTCCAGCTGCC
TGCATTGCTGCTTCCTGGGGTGTCGATCGTAGTGACGCCGTTGTTGTCGC
TGATGCAAGACCAGGTGTCGCAGCTTGTGCATGGCCTGGGCATCCCTGCG
ACGTACCTGAGCGGGGAGCAGAAGTTCGCAGACGTGGAGGCAGTGTATCG
GGAGCTAGAGGCAGAAAGCGGTCCCACGTGCAAACTCCTTTACGTAACCC
CCGAAAAGTTGGCCTGTTTGTCTGAGGAGGGAGGAGGAGGGGGAGGGGCG
CGGCTGAGGGGGATTCTGGGCAGGCTGCATGAGAGGGGTTTGTTGTCGAG
GCTGGTGGTGGATGAGGCGCATTGCATTTCGTCGTGGGGCCACGATTTCC
GACAGTCCTACCGCAAATTGGGTCTGTTCCACGGGCTCTTCCCGATGCTG
CCCACGATCGCAGTGACCGCGACTGCCACAAGCGCTGTCTTGTCGGATGT
GCAAAAGAGTTTGGGATTGGGTGGGGAAGGGAGGCGGGTGAAAGTGTTTC
GGACATCGTTCAACCGCAGAAACTTGCTCTTGTCGGTGCGAGAAAAGCCT
TCAAAGCCCAAGCAGGCCATGGAAGCACTGGCAACGCTGCTGCGACGCAG
GTTTCCTCGAGGCAGTGGGATTGTGTACTGTATGACGCGGGAGGAGAGCG
AGAAAGTGGCGGTGTTTCTGCGGTTTCAAAAAGGAATTGCCGCCGACGTC
TACCATGCCGGGATGACCCCTCTGCAGAAAGCACAGGTGCAGCGGCTGTG
GCAGCGTTTTGCGGTGTGTTGTGCAGGTGGAGGCAAGTCTTTGTGTTTCC
AGCTGCCTGCATTGCTGCTTCCTGGGGTGTCGATCGTAGTGACGCCGTTG
TTGTCGCTGATGCAAGACCAGGTGTCGCAGCTTGTGCATGGCCTGGGCAT
CCCTGCGACGTACCTGAGCGGGGAGCAGAAGTTCGCAGACGTGGAGGCAG
TGTATCGGGAGCTAGAGGCAGAAAGCGGTCCCACGTGCAAACTCCTTTAC
GTAACCCCCGAAAAGTTGGCCTGTTTGTCTGAGGAGGGAGGAGGAGGGGG
AGGGGCGCGGCTGAGGGGGATTCTGGGCAGGCTGCATGAGAGGGGTTTGT
TGTCGAGGCTGGTGGTGGATGAGGCGCATTGCATTTCGTCGTGGGGCCAC
GATTTCCGACAGTCCTACCGCAAATTGGGTCTGTTCCACGGGCTCTTCCC
GATGCTGCCCACGATCGCAGTGACCGCGACTGCCACAAGCGCTGTCTTGT
CGGATGTGCAAAAGAGTTTGGGATTGGGTGGGGAAGGGAGGCGGGTGAAA
GTGTTTCGGACATCGTTCAACCGCAGAAACTTGCTCTTGTCGGTGCGAGA
AAAGCCTTCAAAGCCCAAGCAGGCCATGGAAGCACTGGCAACGCTGCTGC
GACGCAGGTTTCCTCGAGGCAGTGGGATTGTGTACTGTATGACGCGGGAG
GAGAGCGAGAAAGTGGCGGTGTTTCTGCGGTTTCAAAAAGGAATTGCCGC
CGACGTCTACCATGCCGGGATGACCCCTCTGCAGAAAGCACAGGTGCAGC
GGCTGTGGCAGCGT
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