mRNA_M-pyrifera_M_contig8802.20445.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8802.20445.1 vs. uniprot
Match: D8LCK2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK2_ECTSI) HSP 1 Score: 275 bits (704), Expect = 6.790e-82 Identity = 185/246 (75.20%), Postives = 202/246 (82.11%), Query Frame = 1 Query: 1 QVGRSGGADLAGFLQRLAHAYHKVVLSKRLRHPPPLPPIARFRGLRAGVNGTAAXXXXXXXXXXXXXXXXSMGGSXXXXXXXXXADTVTAAAAXXXXXXXXXXXXXXXXAASWFAPFMSGLGLRCLVVLEDVWEADVVAAASAAGFDVLVTTAFRDLVPDSALTTRLEVGGLSKEEARSLLRRCSGLDLQATLPPSADGIIKACGALALPLAIAASLPAVRCRSDEAAWANLHAILSHKASRLQEA 738 QVGRSGG DLA L RLAHAYH+VVL KRLR+PPPLPPI+RFRG R NG AA XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXAA+WF P+MSGLGLRCLVVLEDVWEA+VVAAASAAGFD++VTTAFRDLVPDS L TRL+VGGL+++EARSLLRRCSGL QA LPPSADG+IKACGALALPL IA SLPAVRCRSDEAAWANL++ILSHKA+RL E+ Sbjct: 654 QVGRSGGTDLACLLHRLAHAYHRVVLCKRLRNPPPLPPISRFRGPR---NGEAAAEXXXXXXXXXXXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXXXAATWFTPYMSGLGLRCLVVLEDVWEAEVVAAASAAGFDLVVTTAFRDLVPDSPLCTRLDVGGLARDEARSLLRRCSGLAWQAPLPPSADGVIKACGALALPLTIAGSLPAVRCRSDEAAWANLYSILSHKATRLGES 882
BLAST of mRNA_M-pyrifera_M_contig8802.20445.1 vs. uniprot
Match: A0A6H5JQC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQC7_9PHAE) HSP 1 Score: 273 bits (698), Expect = 1.630e-79 Identity = 163/246 (66.26%), Postives = 181/246 (73.58%), Query Frame = 1 Query: 1 QVGRSGGADLAGFLQRLAHAYHKVVLSKRLRHPPPLPPIARFRGLRAGVNGTAAXXXXXXXXXXXXXXXXSMGGSXXXXXXXXXADTVTAAAAXXXXXXXXXXXXXXXXAASWFAPFMSGLGLRCLVVLEDVWEADVVAAASAAGFDVLVTTAFRDLVPDSALTTRLEVGGLSKEEARSLLRRCSGLDLQATLPPSADGIIKACGALALPLAIAASLPAVRCRSDEAAWANLHAILSHKASRLQEA 738 QVG SGG DLA L RLAHAYH+VVL KRLR+PPPLPPI RFRG R A XXXXXXXXXXX +M + AA+WF P+MSGLGLRCLVVLEDVWEA+VVAAASAAGFD++VTTAFRDLVPDS L TRL+VGGL+++EARSLLRRCSGL QA LPPSADG+IKACGALALPL IA SLPAVRCRSDEAAWANL++ILSHKA+RL E+ Sbjct: 554 QVGLSGGKDLACLLHRLAHAYHRVVLCKRLRNPPPLPPIGRFRGPR-NAEAAAXXXXXXXXXXXXCGVFSTMNATFKAAYNFRGIRCDDPLFPTFCLGLLLKAEATATAAATWFTPYMSGLGLRCLVVLEDVWEAEVVAAASAAGFDLVVTTAFRDLVPDSPLCTRLDVGGLARDEARSLLRRCSGLAWQAPLPPSADGVIKACGALALPLTIAGSLPAVRCRSDEAAWANLYSILSHKATRLGES 798
BLAST of mRNA_M-pyrifera_M_contig8802.20445.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 1.260e-9 Identity = 45/110 (40.91%), Postives = 63/110 (57.27%), Query Frame = 1 Query: 358 GLGLRCLVVLEDVWEADVVAAASAAGFDVLVTTAFRDLVPDSALTTRLEVGGLSKEEARSLLRRCSGLDLQATLPPSADGIIKACGALALPLAIAASLPAVRCRSDEAAW 687 G GL+CL V+++VWE +VV AG VL++T +LV +EV LS+ EA S+LR+ + L + LP A +I+ CG +A+ LA L VR RSD AW Sbjct: 276 GEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEV-VEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAW 384
BLAST of mRNA_M-pyrifera_M_contig8802.20445.1 vs. uniprot
Match: D8LL58_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL58_ECTSI) HSP 1 Score: 65.9 bits (159), Expect = 3.250e-8 Identity = 48/127 (37.80%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 367 LRCLVVLEDVWEADVVAAASAAGFDVLVTTAFRDLVPDSALTTRLEVGGLSKEEARSLLRRCSGLDLQATLP-PSADG--IIKACGALALPLAIAASLPAVRCRSDEA-AWANLHAILSHKASRLQE 735 LRCLVVL+DVW+A +V GF LVTT ++P EV L+ EA LL+ S +AT P+ +G + K CG L LPLAI ++ + R D A W +HA+L + +Q+ Sbjct: 358 LRCLVVLDDVWDAQIVPLFLCGGFHSLVTTRDLAVIPRDLQGVCTEVEMLTNAEALELLKNAS----RATAAIPTNEGLKVAKDCGFLPLPLAIVGAMGSSRADPDSAETWRGIHALLQQEPELVQD 480
BLAST of mRNA_M-pyrifera_M_contig8802.20445.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI) HSP 1 Score: 65.5 bits (158), Expect = 4.540e-8 Identity = 51/126 (40.48%), Postives = 71/126 (56.35%), Query Frame = 1 Query: 376 LVVLEDVWEADVVAAASAAGFDVLVTTAFRDLVPDSALTTRLEVGGLSKEEARSLLRRCSGLDLQATLPPSAD------GIIKACGALALPLAIAASLPAVRCRSDEA-AWANLHAILSHKASRLQ 732 LVVL+DVWE +VV A GF +L+TT R +V D A RLE+G +++EEA LLR+ SG T+ P D ++ CG L L LAIA S+ AV+ + A AW L + A +++ Sbjct: 174 LVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPA--GRLELGDMTEEEALELLRKTSG-----TVDPGDDVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMR 292
BLAST of mRNA_M-pyrifera_M_contig8802.20445.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 3.880e-7 Identity = 52/126 (41.27%), Postives = 69/126 (54.76%), Query Frame = 1 Query: 376 LVVLEDVWEADVVAAASAAGFDVLVTTAFRDLVPDSALTTRLEVGGLSKEEARSLLRRCSGLDLQATLPPSAD------GIIKACGALALPLAIAASLPAVRCRSDEA-AWANLHAILSHKASRLQ 732 LVVL+DVWE +VV A GF VL+TT R +V A RLEVG +++EEA LLR+ SG A P D ++ CG L L LAIA S+ V+ + A AW L L + A +++ Sbjct: 335 LVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPA--GRLEVGDMTEEEALELLRKSSG----AVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMR 454
BLAST of mRNA_M-pyrifera_M_contig8802.20445.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 62.0 bits (149), Expect = 6.060e-7 Identity = 50/122 (40.98%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 376 LVVLEDVWEADVVAAASAAGFDVLVTTAFRDLVPDSALTTRLEVGGLSKEEARSLLRRCSGLDLQA--TLPPSADGIIKACGALALPLAIAASLPAVRCRSDEA-AWANLHAILSHKASRLQ 732 LVVL+DVWE +VV A GF VL+TT R +V A RLE+G +++EEA LLR+ SG Q + ++ CG L L LAIA S+ VR + A AW L L + A +++ Sbjct: 389 LVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPA--GRLELGDMTEEEALELLRKTSGTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMR 508
BLAST of mRNA_M-pyrifera_M_contig8802.20445.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 62.0 bits (149), Expect = 6.250e-7 Identity = 52/126 (41.27%), Postives = 69/126 (54.76%), Query Frame = 1 Query: 376 LVVLEDVWEADVVAAASAAGFDVLVTTAFRDLVPDSALTTRLEVGGLSKEEARSLLRRCSGLDLQATLPPSAD------GIIKACGALALPLAIAASLPAVRCRSDEA-AWANLHAILSHKASRLQ 732 LVVL+DVWE +VV A GF VL+TT R +V A RLE+G +++EEA LLR+ SG A P D ++ CG L L LAIA S+ VR + A AW L L + A +++ Sbjct: 372 LVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPA--GRLELGDVTEEEALELLRKTSG----AVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMR 491
BLAST of mRNA_M-pyrifera_M_contig8802.20445.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 1.400e-6 Identity = 50/127 (39.37%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 376 LVVLEDVWEADVVAAASAAGFDVLVTTAFRDLVPDSALTTRLEVGGLSKEEARSLLRRCSGLDLQATLPPSADGI-------IKACGALALPLAIAASLPAVRCRSDEA-AWANLHAILSHKASRLQ 732 LVVL+DVWE +VV A GF VLVTT R +V T LE+G +++EEA LL + SG T+ D + + CG L L LAIA SLP V+ + A AW L L + ++++ Sbjct: 266 LVVLDDVWEREVVDALLPLGFKVLVTTRDRSVV--GVPTRCLELGDMTEEEALELLLKTSG-----TVGRPGDSVRTVMTKVVTLCGRLPLVLAIAGSLPVVKGKGLTAGAWGKLIDELENVVTKME 385
BLAST of mRNA_M-pyrifera_M_contig8802.20445.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI) HSP 1 Score: 59.3 bits (142), Expect = 4.470e-6 Identity = 46/115 (40.00%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 376 LVVLEDVWEADVVAAASAAGFDVLVTTAFRDLVPDSALTTRLEVGGLSKEEARSLLRRCSGLDLQATLPPSADGI-------IKACGALALPLAIAASLPAVRCRS-DEAAWANL 696 LVVL+DVWE +VVAA G VLVTT R +V LE+G ++++EA LL + SG T+ DG+ + CG L L LAIA S+P V+ + + AW L Sbjct: 366 LVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIV--GVPGGLLELGDMAEDEALELLWKTSG-----TVGQPGDGVRTQMTKVVDRCGRLPLVLAIAGSMPVVKGKGLKDGAWEEL 473 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8802.20445.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8802.20445.1 >prot_M-pyrifera_M_contig8802.20445.1 ID=prot_M-pyrifera_M_contig8802.20445.1|Name=mRNA_M-pyrifera_M_contig8802.20445.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=310bp QVGRSGGADLAGFLQRLAHAYHKVVLSKRLRHPPPLPPIARFRGLRAGVNback to top mRNA from alignment at M-pyrifera_M_contig8802:9017..11271- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8802.20445.1 ID=mRNA_M-pyrifera_M_contig8802.20445.1|Name=mRNA_M-pyrifera_M_contig8802.20445.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2255bp|location=Sequence derived from alignment at M-pyrifera_M_contig8802:9017..11271- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8802:9017..11271- >mRNA_M-pyrifera_M_contig8802.20445.1 ID=mRNA_M-pyrifera_M_contig8802.20445.1|Name=mRNA_M-pyrifera_M_contig8802.20445.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1860bp|location=Sequence derived from alignment at M-pyrifera_M_contig8802:9017..11271- (Macrocystis pyrifera P11B4 male)back to top |