mRNA_M-pyrifera_M_contig87962.20437.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig87962.20437.1 vs. uniprot
Match: A0A2E7KLE8_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KLE8_9PLAN) HSP 1 Score: 251 bits (642), Expect = 2.460e-84 Identity = 122/136 (89.71%), Postives = 125/136 (91.91%), Query Frame = 1 Query: 1 MELILISCWFCKVLPGRLTVFRSEADCVEGRVGVKTEFCPLVSGILSWCVSDFVPICPAFVPLWPGCLRGKLRTAVNCSSEARVKIDGDSGVVETVMFDVPVCVDVPRARARKGTGYASAGGEQGESVQLGVREVQ 408 MELILISCWFCKVLPGRLTVFRSEADCVEGRVGVKTEFCPLVSGILSWCV FVPICPAFVPLWPGC +LRT CSSEARVKIDGDSGVVETV+ D+PVCVDVPRARARKGTGYA AGGEQGESVQL VREVQ Sbjct: 1 MELILISCWFCKVLPGRLTVFRSEADCVEGRVGVKTEFCPLVSGILSWCVLKFVPICPAFVPLWPGCQGEQLRTGAGCSSEARVKIDGDSGVVETVVLDIPVCVDVPRARARKGTGYALAGGEQGESVQLRVREVQ 136
BLAST of mRNA_M-pyrifera_M_contig87962.20437.1 vs. uniprot
Match: A0A517WLD5_9PLAN (Uncharacterized protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WLD5_9PLAN) HSP 1 Score: 249 bits (637), Expect = 5.110e-83 Identity = 121/136 (88.97%), Postives = 124/136 (91.18%), Query Frame = 1 Query: 1 MELILISCWFCKVLPGRLTVFRSEADCVEGRVGVKTEFCPLVSGILSWCVSDFVPICPAFVPLWPGCLRGKLRTAVNCSSEARVKIDGDSGVVETVMFDVPVCVDVPRARARKGTGYASAGGEQGESVQLGVREVQ 408 MELIL SCWFCKVLPGRLTV R+EADCVEGRVGVKTEFCPLVSGILSWCVSDFVPICPAFVPLWPGCL GKL+T CS E RVKIDGDSGV ETVMFDVPVCVDVPRARARK T YASAGGEQGESVQ GVR+VQ Sbjct: 1 MELILFSCWFCKVLPGRLTVARNEADCVEGRVGVKTEFCPLVSGILSWCVSDFVPICPAFVPLWPGCLGGKLQTGAGCSREYRVKIDGDSGVDETVMFDVPVCVDVPRARARKRTAYASAGGEQGESVQRGVRKVQ 136
BLAST of mRNA_M-pyrifera_M_contig87962.20437.1 vs. uniprot
Match: A0A517QET4_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517QET4_9PLAN) HSP 1 Score: 103 bits (256), Expect = 7.690e-25 Identity = 65/137 (47.45%), Postives = 77/137 (56.20%), Query Frame = 1 Query: 25 WFCKVLPGRLTVFRSE---------ADCVEGRVGVKTEFCPLVSGILSWCVSDFVPICPAFVPLWPGCLRGK-LRTAVNCSSEARVKIDGDSGVVETVMFDVPVCVDVPRARARKGTGYASAGGEQGESVQLGVREV 405 W + L G+ TV E D VEGRVGVKTEF P+VSG+ P FV +WP RG+ LRT NCS RVKIDGDSG VE+++ VPV D PRARAR G Y SAG +Q + VQ +V Sbjct: 68 WSIQALSGKPTVAPGELHLGVSTDCVDLVEGRVGVKTEFFPVVSGVCPGLAGILSRSVPVFVTMWPD-RRGRILRTGANCSGVKRVKIDGDSGAVESLVPCVPVHADPPRARARWGPAYDSAGVDQVQIVQRNSEDV 203
BLAST of mRNA_M-pyrifera_M_contig87962.20437.1 vs. uniprot
Match: A0A518A0R3_9PLAN (Uncharacterized protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A0R3_9PLAN) HSP 1 Score: 89.7 bits (221), Expect = 4.710e-20 Identity = 57/111 (51.35%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 85 EGRVGVKTEFCPLVSG---ILSWCVSDFVPICPAFVPLWPGCLRGKLRTAVNCSSEARVKIDGDSGVVETVMFDVPVCVDVPRARARKGTGYASAGGEQGESVQLGVREVQ 408 E RVGVKT+ CP V+G +L+ +S FV + FVP+WP RT S E VKIDGDSGVV +V+ D+ PRARAR G Y S QGESVQ+GVREVQ Sbjct: 31 ERRVGVKTDLCPFVAGFCPVLAGILSRFVLV---FVPMWPASKGETGRTDSLLSGENSVKIDGDSGVVSSVVPDMQGTEHRPRARARFGPTYDSECANQGESVQVGVREVQ 138
BLAST of mRNA_M-pyrifera_M_contig87962.20437.1 vs. uniprot
Match: A0A518ADW8_9PLAN (Uncharacterized protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518ADW8_9PLAN) HSP 1 Score: 84.3 bits (207), Expect = 9.970e-18 Identity = 57/136 (41.91%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 22 CWFCKVLPGRLTVFRSEADCVEGRVGVKTE-------FCPLVSGILSWCVSDFVPICPAFVPLWPGCLRGKLRTAVNCSSEARVKIDGDSGVVETVMFDVPVCVDVPRARARKGTGYASAGGEQGESVQLGVREVQ 408 CW ++L +++ R VEGRVGVKT+ FCP++SGILS V FV +WP L+ RT CS +KIDGDSG +V+ + PRARA+ G Y SAG ESVQL V E+Q Sbjct: 34 CWM-RLLWVMVSISRELFHSVEGRVGVKTKLCPGVSSFCPVLSGILSRSVLYFVL-------MWPDQLKRTWRTGSKCSGGNLMKIDGDSGEAASVILQMQCTQHRPRARAKLGLTYGSAGAVPVESVQLEVEEIQ 161
BLAST of mRNA_M-pyrifera_M_contig87962.20437.1 vs. uniprot
Match: A0A518AEW6_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AEW6_9PLAN) HSP 1 Score: 81.6 bits (200), Expect = 1.790e-16 Identity = 47/89 (52.81%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 82 VEGRVGVKTEFCPLVSGILSWCVSDFVPICPAFVPLWPGCLRGK-LRTAVNCSSEARVKIDGDSGVVETVMFDVPVCVDVPRARARKGT 345 VEGR+GVKTEF P+VSG+ P FV +WP RG+ LRT CS VK DGDSG VE+++ VPV D PRARAR GT Sbjct: 92 VEGRMGVKTEFFPVVSGVCPGLAGILSRSVPVFVTIWPD-RRGRILRTGAKCSGAKWVKFDGDSGAVESLVPCVPVHADPPRARARLGT 179
BLAST of mRNA_M-pyrifera_M_contig87962.20437.1 vs. uniprot
Match: A0A517Q994_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q994_9PLAN) HSP 1 Score: 75.1 bits (183), Expect = 1.110e-14 Identity = 49/120 (40.83%), Postives = 67/120 (55.83%), Query Frame = 1 Query: 58 VFRSEADCVEGRVGVKTEFCPLVSGILSWCVSDFVPICPAFVPLWP---------GCLRGK-LRTAVNCSSEARVKIDGDSGVVETVMFDVPVCVDVPRARARKGTGYASAGGEQGESVQ 387 V ++ E VG++T+FCP V+G+ CP FV + G +RG+ +RT NCSS+ VKID SG +++ VPV VD+PRARAR G Y SAG +QG+ VQ Sbjct: 20 VLTEGSNFAESFVGIRTKFCPNVAGL-----------CPVFVLIVSIFGQNLSRFGQIRGRTIRTGSNCSSKNLVKIDDVSGAFASLVRRVPVHVDLPRARARLGPTYDSAGADQGQIVQ 128
BLAST of mRNA_M-pyrifera_M_contig87962.20437.1 vs. uniprot
Match: A0A518FXR1_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FXR1_9PLAN) HSP 1 Score: 72.8 bits (177), Expect = 3.670e-13 Identity = 45/87 (51.72%), Postives = 51/87 (58.62%), Query Frame = 3 Query: 39 ASGPVNRFPE*G*LCGRARGGQDRILSSCVR-------DFVLVCLGFCPDLSGVCPAVAWLPKGE-IANRCELFQ*SQGENRW*FRC 275 ASG VNR C RARGGQDRILS CVR +FV +C GFC D++G P+GE IAN CE+FQ GE R FRC Sbjct: 126 ASGDVNRLCR---SCRRARGGQDRILSCCVRSLSWFGRNFVSICPGFCHDVAG--------PEGENIANGCEMFQWIPGEIRRRFRC 201
BLAST of mRNA_M-pyrifera_M_contig87962.20437.1 vs. uniprot
Match: A0A517WEE5_9PLAN (Uncharacterized protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WEE5_9PLAN) HSP 1 Score: 70.5 bits (171), Expect = 6.730e-13 Identity = 50/112 (44.64%), Postives = 58/112 (51.79%), Query Frame = 1 Query: 76 DCVEGRVGVKTEFCPLVSGILSWCVSDFVPICPAFVPLWPGCLRGKLRTAVNCSSEARVKIDGDSGVVETVMFDVPVC-VDVPRARARKGTGYASAGGEQGESVQLGVREVQ 408 D E R GVKTEFCP V+G VS + F+ C + T C E VK DG SG ++ V C V RARAR GTGY AG +QGE +QL VREVQ Sbjct: 13 DFAERRRGVKTEFCPNVAGFCPG-VSQNLSWSGRFLSCCALCQKWIQVTGAGCFREQEVKTDGFSGGCGALVRFVSWCRFPVSRARARLGTGYGEAGADQGEFIQLLVREVQ 123
BLAST of mRNA_M-pyrifera_M_contig87962.20437.1 vs. uniprot
Match: A0A518ADE9_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518ADE9_9PLAN) HSP 1 Score: 69.7 bits (169), Expect = 2.760e-12 Identity = 53/127 (41.73%), Postives = 64/127 (50.39%), Query Frame = 1 Query: 25 WF--CKVLPGRLTVFR-SEADCVEGRVGVKTEFCPLVSG---ILSWCVSDFVPICPAFVPLWPGCLRGK-LRTAVNCSSEARVKIDGDSGVVETVMFDVPVCVDVPRARARKGTGYASAGGEQGESV 384 WF C+ R T E + VEGRVGVKT FCP V+G + VS F PI F RG+ RT CS RVKIDG SG V +++ VPV + PRARA G Y +Q + V Sbjct: 24 WFHHCRASRQRHTSMSIDERNSVEGRVGVKTNFCPDVAGLCPVFVLIVSIFGPILSRF-----DLTRGRTFRTGSKCSGGKRVKIDGISGAVASLVRCVPVLANPPRARATFGAEYEWGAADQVQCV 145 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87962.20437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig87962.20437.1 >prot_M-pyrifera_M_contig87962.20437.1 ID=prot_M-pyrifera_M_contig87962.20437.1|Name=mRNA_M-pyrifera_M_contig87962.20437.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=136bp MELILISCWFCKVLPGRLTVFRSEADCVEGRVGVKTEFCPLVSGILSWCVback to top mRNA from alignment at M-pyrifera_M_contig87962:353..760- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig87962.20437.1 ID=mRNA_M-pyrifera_M_contig87962.20437.1|Name=mRNA_M-pyrifera_M_contig87962.20437.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=408bp|location=Sequence derived from alignment at M-pyrifera_M_contig87962:353..760- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig87962:353..760- >mRNA_M-pyrifera_M_contig87962.20437.1 ID=mRNA_M-pyrifera_M_contig87962.20437.1|Name=mRNA_M-pyrifera_M_contig87962.20437.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=816bp|location=Sequence derived from alignment at M-pyrifera_M_contig87962:353..760- (Macrocystis pyrifera P11B4 male)back to top |