prot_M-pyrifera_M_contig109792.2043.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig109792.2043.1
Unique Nameprot_M-pyrifera_M_contig109792.2043.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length135
Homology
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BLAST of mRNA_M-pyrifera_M_contig109792.2043.1 vs. uniprot
Match: I7MEP7_TETTS (Transmembrane protein, putative n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7MEP7_TETTS)

HSP 1 Score: 90.5 bits (223), Expect = 4.840e-19
Identity = 43/135 (31.85%), Postives = 68/135 (50.37%), Query Frame = 0 
Query:    7 YASNACCNENQNADLVNNFILIDAVFGG---ECEACAQNLKRFWCSFVCSPQQADHM----RFLRYANHTGLYGDKKLCMEVTLDIDPEYMCGVYASCNGVSFVAETAIMSTALGFFQYQGQQGAAEHGEWIEFN 134
            Y    CCN+ QN  + +NF+ IDA FG     C+ CA NLKRFWC++ C P Q+D +    + +   N            +V++ +D + +C V++SCN   +  + + M T  GF  +QG     +  + I  N
Sbjct:   59 YTGATCCNDYQNNQMASNFLQIDATFGSIGNGCDNCASNLKRFWCTYTCDPNQSDFVVIGPKPIVVPNPIDEGATTLTVQDVSILVDSQTVCDVWSSCNLTPYATQVSAMKTPAGFLSFQGANAVTQAAQSIRVN 193
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BLAST of mRNA_M-pyrifera_M_contig109792.2043.1 vs. uniprot
Match: A0A1R2B7W7_9CILI (NPC1_N domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B7W7_9CILI)

HSP 1 Score: 85.9 bits (211), Expect = 1.770e-17
Identity = 47/136 (34.56%), Postives = 66/136 (48.53%), Query Frame = 0 
Query:    3 ACPQYAS-NACCNENQNADLVNNFILIDAVFG---GECEACAQNLKRFWCSFVCSPQQADHMRFLRYAN-HTGLYGDKKLCMEVTLDIDPEYMCGVYASCNGVSFVAETAIMSTALGFFQYQGQQGAAEHGEWIEF 133
            ACP +A  + CCN +QN  ++  F L+D+ FG   G C+ CA NLKR WC F CSP QAD +     A   + + G           +     C +Y SC    +V E + M +  GF ++QG +G      W  F
Sbjct:   66 ACPMFAGEDVCCNNDQNLQMLYKFSLLDSTFGSQVGGCDICAANLKRLWCYFTCSPNQADFVSAGPQAIVPSPIDGHMMQIFLNNFTVTKSLSCELYNSCQKCPYVTEVSAMQSPEGFLEFQGYEGIPIGLLWTTF 201
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BLAST of mRNA_M-pyrifera_M_contig109792.2043.1 vs. uniprot
Match: A0A0D7A4W8_9AGAR (Multidrug efflux transporter AcrB transmembrane domain-containing protein n=1 Tax=Fistulina hepatica ATCC 64428 TaxID=1128425 RepID=A0A0D7A4W8_9AGAR)

HSP 1 Score: 55.5 bits (132), Expect = 3.080e-6
Identity = 31/103 (30.10%), Postives = 43/103 (41.75%), Query Frame = 0 
Query:   12 CCNENQNADLVNNFILIDAVFGGECEACAQNLKRFWCSFVCSPQQADHMRFLRYANHTGLYGDKKLCMEVTLDIDPEYMCGVYASCNGVSFVAETAIMSTALG 114
            CC   Q   L +NF  +D +    C AC  N + F+C+F CSP QA   +FL   +       +     +   +DP Y  G Y SC  V   A        +G
Sbjct:   57 CCTSEQLTTLQDNFNTVDNLLSS-CPACRNNFRSFFCTFTCSPNQA---QFLHVTSTQTTSTGQTAVKSLDFFVDPHYGAGFYNSCKDVQVGATNGYAIDLMG 155
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109792.2043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
I7MEP7_TETTS4.840e-1931.85Transmembrane protein, putative n=1 Tax=Tetrahymen... [more]
A0A1R2B7W7_9CILI1.770e-1734.56NPC1_N domain-containing protein n=1 Tax=Stentor c... [more]
A0A0D7A4W8_9AGAR3.080e-630.10Multidrug efflux transporter AcrB transmembrane do... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032190Niemann-Pick C1, N-terminalPFAMPF16414NPC1_Ncoord: 4..111
e-value: 7.0E-17
score: 61.8
NoneNo IPR availablePANTHERPTHR45727:SF2NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1coord: 4..114
NoneNo IPR availablePANTHERPTHR45727FAMILY NOT NAMEDcoord: 4..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig109792contigM-pyrifera_M_contig109792:198..602 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig109792.2043.1mRNA_M-pyrifera_M_contig109792.2043.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig109792 198..602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig109792.2043.1 ID=prot_M-pyrifera_M_contig109792.2043.1|Name=mRNA_M-pyrifera_M_contig109792.2043.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=135bp
ALACPQYASNACCNENQNADLVNNFILIDAVFGGECEACAQNLKRFWCSF
VCSPQQADHMRFLRYANHTGLYGDKKLCMEVTLDIDPEYMCGVYASCNGV
SFVAETAIMSTALGFFQYQGQQGAAEHGEWIEFNI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032190NPC1_N