mRNA_M-pyrifera_M_contig87957.20434.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig87957.20434.1
Unique NamemRNA_M-pyrifera_M_contig87957.20434.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig87957.20434.1 vs. uniprot
Match: A0A2E7KF88_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KF88_9PLAN)

HSP 1 Score: 459 bits (1182), Expect = 2.870e-159
Identity = 274/275 (99.64%), Postives = 275/275 (100.00%), Query Frame = 1
Query:    1 QVARLMPASRLAESRIAYCLERTGRTSESTDKYLSLLETAEEGREGDRERMQIRYEIGRNYLREEQTDKAEAIFRENLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKFRELELQAYRRQGDMDAVNRSALALARAQHSVPLHPGSDFIEPYRMQYGIDRRVEEFNQRISGGTLDELAGELEQLIALLDNRPTTHYPIFLMRLAEVNLQRKRPEQIGKTIQQLNDLQIHNAETLLYQAQSLGMQDEWDQAAELAQRAALLTKDPELH 825
            QVARLMPASRLAESRIAYCLERTGRTSESTDKYLSLLETAEEGREGDRERMQIRYEIGRNYLREEQTDKAEAIFRENLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKFRELELQAYRRQGDMDAVNRSALALARAQHSVPLHPGSDFIEPYRMQYGIDRRVEEFNQRISGGTLDELAGELEQLIALLDNRPTTHYPIFLMRLAEVNLQRKRPEQIGKTIQQLNDLQIHNAETLLYQAQSLGMQDEWDQAAELAQRAALLTK+PELH
Sbjct:   84 QVARLMPASRLAESRIAYCLERTGRTSESTDKYLSLLETAEEGREGDRERMQIRYEIGRNYLREEQTDKAEAIFRENLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKFRELELQAYRRQGDMDAVNRSALALARAQHSVPLHPGSDFIEPYRMQYGIDRRVEEFNQRISGGTLDELAGELEQLIALLDNRPTTHYPIFLMRLAEVNLQRKRPEQIGKTIQQLNDLQIHNAETLLYQAQSLGMQDEWDQAAELAQRAALLTKEPELH 358          
BLAST of mRNA_M-pyrifera_M_contig87957.20434.1 vs. uniprot
Match: A0A812LV88_SYMPI (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812LV88_SYMPI)

HSP 1 Score: 456 bits (1172), Expect = 4.200e-152
Identity = 272/275 (98.91%), Postives = 273/275 (99.27%), Query Frame = 1
Query:    1 QVARLMPASRLAESRIAYCLERTGRTSESTDKYLSLLETAEEGREGDRERMQIRYEIGRNYLREEQTDKAEAIFRENLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKFRELELQAYRRQGDMDAVNRSALALARAQHSVPLHPGSDFIEPYRMQYGIDRRVEEFNQRISGGTLDELAGELEQLIALLDNRPTTHYPIFLMRLAEVNLQRKRPEQIGKTIQQLNDLQIHNAETLLYQAQSLGMQDEWDQAAELAQRAALLTKDPELH 825
            QVARLMPASRLAESRIAYCLERTGRTSESTDKYLSLLETAEEGREGDRERMQIRYEIGRNYLREEQTDKAEAIFRENLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKFRELELQAYRRQGDMDAVNRSALALARAQHSVPLHPGSDFIEPYRMQYGIDRRVEEFNQRISGGTLDELA ELEQLI LLDNRPTTHYPIFLMRLAEVNLQRKRPEQIGKTIQQLNDLQIHNAETLLYQAQSLGMQDEWDQAAELAQRAALLTKDP+LH
Sbjct:  514 QVARLMPASRLAESRIAYCLERTGRTSESTDKYLSLLETAEEGREGDRERMQIRYEIGRNYLREEQTDKAEAIFRENLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKFRELELQAYRRQGDMDAVNRSALALARAQHSVPLHPGSDFIEPYRMQYGIDRRVEEFNQRISGGTLDELASELEQLIELLDNRPTTHYPIFLMRLAEVNLQRKRPEQIGKTIQQLNDLQIHNAETLLYQAQSLGMQDEWDQAAELAQRAALLTKDPDLH 788          
BLAST of mRNA_M-pyrifera_M_contig87957.20434.1 vs. uniprot
Match: A0A517ZZD7_9PLAN (Tetratricopeptide repeat protein n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517ZZD7_9PLAN)

HSP 1 Score: 355 bits (911), Expect = 3.540e-118
Identity = 186/275 (67.64%), Postives = 221/275 (80.36%), Query Frame = 1
Query:    1 QVARLMPASRLAESRIAYCLERTGRTSESTDKYLSLLETAEEGREGDRERMQIRYEIGRNYLREEQTDKAEAIFRENLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKFRELELQAYRRQGDMDAVNRSALALARAQHSVPLHPGSDFIEPYRMQYGIDRRVEEFNQRISGGTLDELAGELEQLIALLDNRPTTHYPIFLMRLAEVNLQRKRPEQIGKTIQQLNDLQIHNAETLLYQAQSLGMQDEWDQAAELAQRAALLTKDPELH 825
            QVA L+P SRLAESRIAYCLERTGRT +STDKYL LL T ++ REGDRERMQIRYEIGRNYLREEQT+ AEAIFRENLGFLPAR                             SLKFRELELQA+R+  + ++ ++ AL L RAQHSVPLHPGS+FIEP+R+QYGIDRRVEEFN+R++GG+LDELAGELEQL+ALL  RPTTH+PIFLMRL EV+ QRKRPE++ +TIQQLN+++I+NAE LLY+AQ+LGM  +W+QA  LAQRAAL++KDPELH
Sbjct:   84 QVAELVPESRLAESRIAYCLERTGRTEQSTDKYLELLATTDQSREGDRERMQIRYEIGRNYLREEQTEAAEAIFRENLGFLPARYQLAKLLIRSDRVNEALPLIEESIQRVPRSLKFRELELQAHRKTDNTESFHQCALELERAQHSVPLHPGSNFIEPFRLQYGIDRRVEEFNKRLAGGSLDELAGELEQLLALLGERPTTHHPIFLMRLVEVDRQRKRPERMRETIQQLNNMRINNAEILLYRAQALGMLGDWNQARVLAQRAALMSKDPELH 358          
BLAST of mRNA_M-pyrifera_M_contig87957.20434.1 vs. uniprot
Match: A0A2E2C7V3_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C7V3_9PLAN)

HSP 1 Score: 259 bits (663), Expect = 8.790e-81
Identity = 170/275 (61.82%), Postives = 215/275 (78.18%), Query Frame = 1
Query:    1 QVARLMPASRLAESRIAYCLERTGRTSESTDKYLSLLETAEEGREGDRERMQIRYEIGRNYLREEQTDKAEAIFRENLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKFRELELQAYRRQGDMDAVNRSALALARAQHSVPLHPGSDFIEPYRMQYGIDRRVEEFNQRISGGTLDELAGELEQLIALLDNRPTTHYPIFLMRLAEVNLQRKRPEQIGKTIQQLNDLQIHNAETLLYQAQSLGMQDEWDQAAELAQRAALLTKDPELH 825
            QVA LMP SRLAESRIAYCLERTGRT +S++ Y  L  +++  RE  RE+MQ  YEIGRN LREE+ D AE +FR+NLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KF EL+L+A ++ G++    ++A  L RAQHSVPLHPGS+FIEP+R++YGIDRRVE FN  I  G+L EL  EL +LI LL+  P+TH  IFLMRL EV  Q+++P ++ +T ++LN++ IHNAE L+YQA++ G   +W+QAA+LA+RA  ++K P LH
Sbjct:   84 QVAELMPESRLAESRIAYCLERTGRTEQSSELYRELNASSDNSREAKREQMQALYEIGRNALREEKVDAAEKLFRQNLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFLELQLRALQQTGNVKQAEQTAQMLERAQHSVPLHPGSNFIEPFRLKYGIDRRVEAFNTEIGNGSLPELEAELVKLIDLLEGYPSTHRQIFLMRLLEVQQQQQQPRKMLETARKLNEIGIHNAEVLMYQAEANGSLGDWNQAAQLARRAGQMSKSPALH 358          
BLAST of mRNA_M-pyrifera_M_contig87957.20434.1 vs. uniprot
Match: A6CBZ8_9PLAN (Uncharacterized protein n=4 Tax=Planctomycetaceae TaxID=126 RepID=A6CBZ8_9PLAN)

HSP 1 Score: 246 bits (628), Expect = 1.540e-75
Identity = 157/275 (57.09%), Postives = 214/275 (77.82%), Query Frame = 1
Query:    1 QVARLMPASRLAESRIAYCLERTGRTSESTDKYLSLLETAEEGREGDRERMQIRYEIGRNYLREEQTDKAEAIFRENLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKFRELELQAYRRQGDMDAVNRSALALARAQHSVPLHPGSDFIEPYRMQYGIDRRVEEFNQRISGGTLDELAGELEQLIALLDNRPTTHYPIFLMRLAEVNLQRKRPEQIGKTIQQLNDLQIHNAETLLYQAQSLGMQDEWDQAAELAQRAALLTKDPELH 825
            +V +LMP SRLAESRIAYCLERTGRT +S++ Y  L  + +  RE  RE+MQ  YE+GRN LREE+  +AE +FR+NLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXX    SLKF EL+ +A+++ GD++   ++A  L RAQH++PLHPGS+FIEP+R+QYGIDR VEEFN++I   +L EL  EL +LI  L++ P+TH  IFLMRL EV  Q++ P ++ +T+Q+LN++ I+NA+ L+Y+A++ GM+ +W+QAA L +RA  ++K  ++H
Sbjct:   84 RVLKLMPESRLAESRIAYCLERTGRTEQSSEIYRELNNSPDFSREAKREQMQALYELGRNALREEKMGEAEKLFRQNLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXQVPGSLKFLELQHRAFQQTGDLELAEQTAQLLERAQHTIPLHPGSNFIEPFRLQYGIDRHVEEFNRKIRNRSLPELELELVKLIDQLNDSPSTHRQIFLMRLLEVQHQQQLPRKMLETVQKLNNMGINNADVLMYRAEATGMRGDWNQAAILGRRAGSMSKAADMH 358          
BLAST of mRNA_M-pyrifera_M_contig87957.20434.1 vs. uniprot
Match: A0A517V662_9PLAN (Tetratricopeptide repeat protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517V662_9PLAN)

HSP 1 Score: 243 bits (620), Expect = 2.420e-74
Identity = 136/275 (49.45%), Postives = 183/275 (66.55%), Query Frame = 1
Query:    1 QVARLMPASRLAESRIAYCLERTGRTSESTDKYLSLLETAEEGREGDRERMQIRYEIGRNYLREEQTDKAEAIFRENLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKFRELELQAYRRQGDMDAVNRSALALARAQHSVPLHPGSDFIEPYRMQYGIDRRVEEFNQRISGGTLDELAGELEQLIALLDNRPTTHYPIFLMRLAEVNLQRKRPEQIGKTIQQLNDLQIHNAETLLYQAQSLGMQDEWDQAAELAQRAALLTKDPELH 825
            QVA L+P SRLAESRIAYCLERTGRT +S++ Y  L  +A+  RE  RE+MQ  YEIGRN LREEQ +++E +FR+NLGFLPAR                             SLKF EL+ +A+ + GD+    ++A  L RAQH+VPLHPGS FIEP+R+QYGIDR VEEFN +I    L EL  +L +LI  L+  P+TH  IFLMRL EV  Q++ P ++ +TI +LN++ I+NA+ L+Y+A++ G+  +W+QAA L QRA  ++K  +LH
Sbjct:   84 QVADLIPDSRLAESRIAYCLERTGRTEQSSELYRELNRSADLSREAKREQMQALYEIGRNALREEQMEESEKLFRQNLGFLPARYQLAKLLIRTKRAQEALPVINESLQQIPGSLKFLELQHRAFLQTGDLKQAEQTAQLLERAQHTVPLHPGSSFIEPFRLQYGIDRHVEEFNTQIGKVPLPELEAKLVKLIDRLEGYPSTHRQIFLMRLLEVQHQQQLPRKMLETILKLNNMGINNADVLMYRAEATGILGDWNQAAVLGQRAGSMSKAADLH 358          
BLAST of mRNA_M-pyrifera_M_contig87957.20434.1 vs. uniprot
Match: UPI0012D42B63 (tetratricopeptide repeat protein n=1 Tax=Gimesia maris TaxID=122 RepID=UPI0012D42B63)

HSP 1 Score: 211 bits (536), Expect = 6.030e-63
Identity = 138/252 (54.76%), Postives = 193/252 (76.59%), Query Frame = 1
Query:   70 GRTSESTDKYLSLLETAEEGREGDRERMQIRYEIGRNYLREEQTDKAEAIFRENLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKFRELELQAYRRQGDMDAVNRSALALARAQHSVPLHPGSDFIEPYRMQYGIDRRVEEFNQRISGGTLDELAGELEQLIALLDNRPTTHYPIFLMRLAEVNLQRKRPEQIGKTIQQLNDLQIHNAETLLYQAQSLGMQDEWDQAAELAQRAALLTKDPELH 825
            GRT +S++ Y  L  + +  RE  RE+MQ  YE+GRN LREE+  +AE +FR+NLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXX    SLKF EL+ +A+++ GD++   ++A  L RAQH++PLHPGS+FIEP+R+QYGIDR VEEFN++I   +L EL  EL +LI  L++ P+TH  IFLMRL EV  Q++ P ++ +T+Q+LN++ I+NA+ L+Y+A++ GM+ +W+QAA L +RA  ++K  ++H
Sbjct:    6 GRTEQSSEIYRELNNSPDFSREAKREQMQALYELGRNALREEKMGEAEKLFRQNLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXQVPGSLKFLELQHRAFQQTGDLELAEQTAQLLERAQHTIPLHPGSNFIEPFRLQYGIDRHVEEFNRKIRNRSLPELELELVKLIDQLNDSPSTHRQIFLMRLLEVQHQQQLPRKMLETVQKLNNMGINNADVLMYRAEATGMRGDWNQAAILGRRAGSMSKAADMH 257          
BLAST of mRNA_M-pyrifera_M_contig87957.20434.1 vs. uniprot
Match: A0A3D3R5I2_9PLAN (Uncharacterized protein n=1 Tax=Gimesia maris TaxID=122 RepID=A0A3D3R5I2_9PLAN)

HSP 1 Score: 205 bits (521), Expect = 1.360e-58
Identity = 139/219 (63.47%), Postives = 171/219 (78.08%), Query Frame = 1
Query:    1 QVARLMPASRLAESRIAYCLERTGRTSESTDKYLSLLETAEEGREGDRERMQIRYEIGRNYLREEQTDKAEAIFRENLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKFRELELQAYRRQGDMDAVNRSALALARAQHSVPLHPGSDFIEPYRMQYGIDRRVEEFNQRISGGTLDELAGELEQLIALLDNRPTTHYPIFLMRLAEVNLQRK 657
            QVA LMP SRLAESRIAYCLERTGRT++S++ Y  L   ++  RE  RE+MQ  YEIGRN LREE T++AE +FRENLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXX  SLKF EL+ +A+++ GD++   ++A  L RAQH++PLHPGS+FIEP+R+QYGIDRRVEEFN +I   +L EL  +L  LI  L++ P+TH  +FLM L  V   R+
Sbjct:   84 QVAHLMPESRLAESRIAYCLERTGRTAQSSEIYRKLNHRSDSSREAKREQMQALYEIGRNALREENTEEAEKLFRENLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXPRSLKFLELQRRAFQQTGDLELAEQTAQLLERAQHTIPLHPGSNFIEPFRLQYGIDRRVEEFNTQIGNASLPELETKLVTLIDRLEDSPSTHRQVFLMLLPAVQQARE 302          
BLAST of mRNA_M-pyrifera_M_contig87957.20434.1 vs. uniprot
Match: A0A517VL28_9PLAN (Tetratricopeptide repeat protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VL28_9PLAN)

HSP 1 Score: 144 bits (364), Expect = 1.320e-36
Identity = 92/275 (33.45%), Postives = 140/275 (50.91%), Query Frame = 1
Query:    1 QVARLMPASRLAESRIAYCLERTGRTSESTDKYLSLLETAEEGREGDRERMQIRYEIGRNYLREEQTDKAEAIFRENLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKFRELELQAYRRQGDMDAVNRSALALARAQHSVPLHPGSDFIEPYRMQYGIDRRVEEFNQRISGGTLDELAGELEQLIALLDNRPTTHYPIFLMRLAEVNLQRKRPEQIGKTIQQLNDLQIHNAETLLYQAQSLGMQDEWDQAAELAQRAALLTKDPELH 825
            Q AR+ P   LA++  A+CLERTGR   ST +Y  L   + +            Y IGRNYLREE  +KAE IFR+N GF PA                              SL F +L+ QA    G +    ++   L RA + +PL+  +DF+ PY  ++GI + VE +NQ +    +D LA +L++++ L+  R    Y   L+ + EV  QRK PE++ K IQ+L +  + NAETL ++A +  +  + ++A  L QR   ++   E+H
Sbjct:   85 QAARIDPDDALAQASYAFCLERTGRMQVSTREYEKLEAYSAKTDTPFASPRHYLYAIGRNYLREENVEKAEEIFRKNNGFPPADYQLAKLLVRSGRAEEALPYIERNLAATPYSLIFNQLQAQALESLGRLAEAKQAEDRLERAMYQIPLNFNTDFLTPYSKRHGIQKEVEAYNQLLERNDMDHLAKKLDEVLELMSERRIPQYKATLISMLEVEFQRKNPERMLKLIQKLKEFGVENAETLQFEAGAYLLSGDMEKAVPLLQRVLEMSPTIEVH 359          
BLAST of mRNA_M-pyrifera_M_contig87957.20434.1 vs. uniprot
Match: A0A517WP02_9PLAN (Cellulose synthase subunit BcsC n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WP02_9PLAN)

HSP 1 Score: 144 bits (362), Expect = 2.710e-36
Identity = 92/275 (33.45%), Postives = 139/275 (50.55%), Query Frame = 1
Query:    1 QVARLMPASRLAESRIAYCLERTGRTSESTDKYLSLLETAEEGREGDRERMQIRYEIGRNYLREEQTDKAEAIFRENLGFLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLKFRELELQAYRRQGDMDAVNRSALALARAQHSVPLHPGSDFIEPYRMQYGIDRRVEEFNQRISGGTLDELAGELEQLIALLDNRPTTHYPIFLMRLAEVNLQRKRPEQIGKTIQQLNDLQIHNAETLLYQAQSLGMQDEWDQAAELAQRAALLTKDPELH 825
            Q A+L P + LA++  A+CLERTGRT EST +Y  L  ++         +  + Y  GRNYLREE   KAE  FR+N  F PA                              SL F  L  QA    G       +A  + RA   +PL+  ++FI+PY +++GI++ VE +N  I    +D LA +LE++  LL++RP   Y   L+ + EV  QRK PE++   I++L +  + NAE L ++A +  +  E ++A  L QR   ++   E+H
Sbjct:   85 QAAKLDPTNDLAQASYAFCLERTGRTQESTREYEKLEASSRNKSTAFANKKHVLYTTGRNYLREENAAKAEEKFRQNANFQPADYQLAKLLVRSGQVESALSIIERNLEQSPNSLNFLSLYAQALEASGREVEAIEAAEKVERALEIIPLNFNTEFIQPYSVRHGIEKEVEAYNHLIKRNDMDHLAEKLEEIFRLLEDRPLPQYKATLVSMIEVEFQRKNPERMLMLIEKLKEHGVENAELLQFKAGAYLLSGEMEKAVPLLQRVLKMSPTIEVH 359          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87957.20434.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A2E7KF88_9PLAN2.870e-15999.64Uncharacterized protein n=6 Tax=Gimesia TaxID=1649... [more]
A0A812LV88_SYMPI4.200e-15298.91Hypothetical protein n=2 Tax=Symbiodinium TaxID=29... [more]
A0A517ZZD7_9PLAN3.540e-11867.64Tetratricopeptide repeat protein n=3 Tax=Gimesia p... [more]
A0A2E2C7V3_9PLAN8.790e-8161.82Uncharacterized protein n=2 Tax=Planctomycetaceae ... [more]
A6CBZ8_9PLAN1.540e-7557.09Uncharacterized protein n=4 Tax=Planctomycetaceae ... [more]
A0A517V662_9PLAN2.420e-7449.45Tetratricopeptide repeat protein n=1 Tax=Gimesia a... [more]
UPI0012D42B636.030e-6354.76tetratricopeptide repeat protein n=1 Tax=Gimesia m... [more]
A0A3D3R5I2_9PLAN1.360e-5863.47Uncharacterized protein n=1 Tax=Gimesia maris TaxI... [more]
A0A517VL28_9PLAN1.320e-3633.45Tetratricopeptide repeat protein n=1 Tax=Gimesia a... [more]
A0A517WP02_9PLAN2.710e-3633.45Cellulose synthase subunit BcsC n=1 Tax=Gimesia aq... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87957contigM-pyrifera_M_contig87957:2..826 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score246.1
Seed ortholog evalue1.8e-62
Seed eggNOG ortholog344747.PM8797T_08724
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Tetratricopeptide repeat
EggNOG OGs2J3YS@203682,COG0457@1,COG0457@2
COG Functional cat.S
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size825
Cds size810
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816789.1409793-UTR-M-pyrifera_M_contig87957:1..161622816789.1409793-UTR-M-pyrifera_M_contig87957:1..16Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig87957 2..16 +
1692278179.368844-UTR-M-pyrifera_M_contig87957:1..161692278179.368844-UTR-M-pyrifera_M_contig87957:1..16Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig87957 2..16 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816789.1532629-CDS-M-pyrifera_M_contig87957:16..8261622816789.1532629-CDS-M-pyrifera_M_contig87957:16..826Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87957 17..826 +
1692278179.3831801-CDS-M-pyrifera_M_contig87957:16..8261692278179.3831801-CDS-M-pyrifera_M_contig87957:16..826Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87957 17..826 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87957.20434.1prot_M-pyrifera_M_contig87957.20434.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig87957 17..826 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig87957.20434.1

>prot_M-pyrifera_M_contig87957.20434.1 ID=prot_M-pyrifera_M_contig87957.20434.1|Name=mRNA_M-pyrifera_M_contig87957.20434.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=270bp
MPASRLAESRIAYCLERTGRTSESTDKYLSLLETAEEGREGDRERMQIRY
EIGRNYLREEQTDKAEAIFRENLGFLPARYQLAKLLIRSDRIEEALPLIQ
ESLQRVPQSLKFRELELQAYRRQGDMDAVNRSALALARAQHSVPLHPGSD
FIEPYRMQYGIDRRVEEFNQRISGGTLDELAGELEQLIALLDNRPTTHYP
IFLMRLAEVNLQRKRPEQIGKTIQQLNDLQIHNAETLLYQAQSLGMQDEW
DQAAELAQRAALLTKDPELH
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mRNA from alignment at M-pyrifera_M_contig87957:2..826+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig87957.20434.1 ID=mRNA_M-pyrifera_M_contig87957.20434.1|Name=mRNA_M-pyrifera_M_contig87957.20434.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=825bp|location=Sequence derived from alignment at M-pyrifera_M_contig87957:2..826+ (Macrocystis pyrifera P11B4 male)
CAGGTTGCCCGGCTGATGCCCGCGAGCCGACTGGCCGAGAGCCGCATCGC TTATTGCCTGGAACGGACCGGGCGCACCTCGGAGAGTACCGACAAATACC TGAGTCTGCTGGAGACCGCAGAAGAGGGACGCGAAGGCGATCGCGAGCGG ATGCAGATCCGCTATGAAATCGGTCGCAATTATCTGCGCGAGGAACAGAC CGACAAAGCGGAGGCGATCTTCCGCGAGAACCTTGGTTTCCTGCCGGCCC GTTATCAGCTGGCCAAATTGTTGATTCGCTCGGACCGCATTGAGGAAGCG CTGCCTTTGATTCAGGAATCGTTACAGCGGGTTCCCCAGTCACTCAAATT CCGGGAACTGGAACTGCAGGCATATCGCAGACAAGGCGACATGGACGCGG TCAACCGGAGTGCCCTCGCACTGGCGCGGGCCCAGCACTCAGTCCCTTTG CATCCGGGTTCCGATTTCATCGAGCCCTATCGAATGCAGTATGGCATCGA TCGACGGGTGGAAGAGTTCAATCAGCGGATTTCGGGAGGCACACTGGATG AGCTGGCGGGCGAACTGGAGCAGTTGATCGCGCTGCTCGATAACCGCCCC ACGACCCATTATCCGATCTTCCTGATGCGGCTGGCGGAAGTGAATCTGCA GCGAAAACGTCCCGAGCAGATCGGCAAGACGATTCAGCAGTTGAACGACC TGCAGATCCACAACGCCGAGACACTGCTCTACCAGGCGCAGTCTCTGGGG ATGCAGGACGAGTGGGATCAGGCTGCAGAGCTGGCTCAGCGGGCGGCGCT GCTGACCAAAGATCCGGAGCTGCAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig87957:2..826+

>mRNA_M-pyrifera_M_contig87957.20434.1 ID=mRNA_M-pyrifera_M_contig87957.20434.1|Name=mRNA_M-pyrifera_M_contig87957.20434.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1620bp|location=Sequence derived from alignment at M-pyrifera_M_contig87957:2..826+ (Macrocystis pyrifera P11B4 male)
ATGCCCGCGAGCCGACTGGCCGAGAGCCGCATCGCTTATTGCCTGGAACG
GACCGGGCGCACCTCGGAGAGTACCGACAAATACCTGAGTCTGCTGGAGA
CCGCAGAAGAGGGACGCGAAGGCGATCGCGAGCGGATGCAGATCCGCTAT
GAAATCGGTCGCAATTATCTGCGCGAGGAACAGACCGACAAAGCGGAGGC
GATCTTCCGCGAGAACCTTGGTTTCCTGCCGGCCCGTTATCAGCTGGCCA
AATTGTTGATTCGCTCGGACCGCATTGAGGAAGCGCTGCCTTTGATTCAG
GAATCGTTACAGCGGGTTCCCCAGTCACTCAAATTCCGGGAACTGGAACT
GCAGGCATATCGCAGACAAGGCGACATGGACGCGGTCAACCGGAGTGCCC
TCGCACTGGCGCGGGCCCAGCACTCAGTCCCTTTGCATCCGGGTTCCGAT
TTCATCGAGCCCTATCGAATGCAGTATGGCATCGATCGACGGGTGGAAGA
GTTCAATCAGCGGATTTCGGGAGGCACACTGGATGAGCTGGCGGGCGAAC
TGGAGCAGTTGATCGCGCTGCTCGATAACCGCCCCACGACCCATTATCCG
ATCTTCCTGATGCGGCTGGCGGAAGTGAATCTGCAGCGAAAACGTCCCGA
GCAGATCGGCAAGACGATTCAGCAGTTGAACGACCTGCAGATCCACAACG
CCGAGACACTGCTCTACCAGGCGCAGTCTCTGGGGATGCAGGACGAGTGG
GATCAGGCTGCAGAGCTGGCTCAGCGGGCGGCGCTGCTGACCAAAGATCC
GGAGCTGCATATGCCCGCGAGCCGACTGGCCGAGAGCCGCATCGCTTATT
GCCTGGAACGGACCGGGCGCACCTCGGAGAGTACCGACAAATACCTGAGT
CTGCTGGAGACCGCAGAAGAGGGACGCGAAGGCGATCGCGAGCGGATGCA
GATCCGCTATGAAATCGGTCGCAATTATCTGCGCGAGGAACAGACCGACA
AAGCGGAGGCGATCTTCCGCGAGAACCTTGGTTTCCTGCCGGCCCGTTAT
CAGCTGGCCAAATTGTTGATTCGCTCGGACCGCATTGAGGAAGCGCTGCC
TTTGATTCAGGAATCGTTACAGCGGGTTCCCCAGTCACTCAAATTCCGGG
AACTGGAACTGCAGGCATATCGCAGACAAGGCGACATGGACGCGGTCAAC
CGGAGTGCCCTCGCACTGGCGCGGGCCCAGCACTCAGTCCCTTTGCATCC
GGGTTCCGATTTCATCGAGCCCTATCGAATGCAGTATGGCATCGATCGAC
GGGTGGAAGAGTTCAATCAGCGGATTTCGGGAGGCACACTGGATGAGCTG
GCGGGCGAACTGGAGCAGTTGATCGCGCTGCTCGATAACCGCCCCACGAC
CCATTATCCGATCTTCCTGATGCGGCTGGCGGAAGTGAATCTGCAGCGAA
AACGTCCCGAGCAGATCGGCAAGACGATTCAGCAGTTGAACGACCTGCAG
ATCCACAACGCCGAGACACTGCTCTACCAGGCGCAGTCTCTGGGGATGCA
GGACGAGTGGGATCAGGCTGCAGAGCTGGCTCAGCGGGCGGCGCTGCTGA
CCAAAGATCCGGAGCTGCAT
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