mRNA_M-pyrifera_M_contig8790.20431.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8790.20431.1 vs. uniprot
Match: D7FHE9_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHE9_ECTSI) HSP 1 Score: 169 bits (429), Expect = 2.150e-51 Identity = 77/113 (68.14%), Postives = 99/113 (87.61%), Query Frame = 1 Query: 1 LDCATDFGINVRPSFMEKDQAKKLEMREDLSVNFLPKWLASMEKQLASTGGIYFGEKMTVADIMIALRVKGLKGGVLDGVPTTIADSYPNLIALHDSVVGEPKIAAFIAKHAK 339 +DCATD+ IN+RPSFMEKD+AKK+EMR DL+ N++PKWL++MEKQL+ST G +F +MTVAD+MIA R+ +K GVLDG+PTTIADS P+L AL+D+VV EPK+AAF+AKHAK Sbjct: 1 MDCATDYYINIRPSFMEKDEAKKMEMRADLAANYIPKWLSNMEKQLSSTDGTFFDGQMTVADMMIAYRLHHMKNGVLDGIPTTIADSCPSLCALYDAVVSEPKVAAFLAKHAK 113
BLAST of mRNA_M-pyrifera_M_contig8790.20431.1 vs. uniprot
Match: A0A6H5KRV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV2_9PHAE) HSP 1 Score: 171 bits (434), Expect = 6.690e-51 Identity = 78/113 (69.03%), Postives = 98/113 (86.73%), Query Frame = 1 Query: 1 LDCATDFGINVRPSFMEKDQAKKLEMREDLSVNFLPKWLASMEKQLASTGGIYFGEKMTVADIMIALRVKGLKGGVLDGVPTTIADSYPNLIALHDSVVGEPKIAAFIAKHAK 339 +DC TD IN+RPSFMEKD+AKK+EMR DL+ NF+PKWL++MEKQL+ST G +F +KMTVADIMIA R+ ++ GVLDG+PTTIADSYP+L A+ D+VV EPK+AAF+AKHAK Sbjct: 93 MDCVTDLHINIRPSFMEKDEAKKMEMRADLAANFIPKWLSNMEKQLSSTDGTFFFDKMTVADIMIACRLHPMRNGVLDGIPTTIADSYPSLCAMCDAVVSEPKVAAFLAKHAK 205
BLAST of mRNA_M-pyrifera_M_contig8790.20431.1 vs. uniprot
Match: B1N8E8_9PHAE (Glutathione S-transferase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E8_9PHAE) HSP 1 Score: 160 bits (406), Expect = 1.180e-46 Identity = 81/114 (71.05%), Postives = 96/114 (84.21%), Query Frame = 1 Query: 1 LDCATDFGINVRPSFMEKDQAKKLEMREDLSVNFLPKWLASMEKQLASTGGIYFGEKMTVADIMIALRVKGLKGGVLDGVPTTIADS-YPNLIALHDSVVGEPKIAAFIAKHAK 339 LD A DF INVRP++ EKDQAK+LEM DL+VN++PKWLA++EKQLA+T GIYF EKM+VADIMI R+K L+ G +GVPTTI DS YPNL AL+DS+VGEPKIAAFIAKH K Sbjct: 93 LDAAVDFYINVRPAYTEKDQAKQLEMFGDLAVNYIPKWLANVEKQLAATEGIYFAEKMSVADIMITTRLKTLRDGNYNGVPTTIFDSSYPNLNALYDSIVGEPKIAAFIAKHDK 206
BLAST of mRNA_M-pyrifera_M_contig8790.20431.1 vs. uniprot
Match: A0A8K1CDB5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDB5_PYTOL) HSP 1 Score: 77.0 bits (188), Expect = 3.120e-13 Identity = 38/112 (33.93%), Postives = 68/112 (60.71%), Query Frame = 1 Query: 1 LDCATDFGINVRPSFMEKDQAKKLEMREDLSVNFLPKWLASMEKQLASTGGIY-FGEKMTVADIMIALRVKGLKGGVLDGVPTTIADSYPNLIALHDSVVGEPKIAAFIAKH 333 L + + P++ + +A+ L R+ L+ PK L++++K++A GG + G+++TVAD+ I + G K G+L G+PTT+ADSY N++ +H+ V PK+ + KH Sbjct: 304 LSLIDELHNTLAPTYRMEAEAQ-LAARKVLAEETFPKMLSALDKRIAGRGGKFAVGDELTVADLAIYGSLLGFKSGMLSGIPTTLADSYSNIMRVHEQVANHPKVQEWTQKH 414
BLAST of mRNA_M-pyrifera_M_contig8790.20431.1 vs. uniprot
Match: A0A353IQF8_9HYPH (Glutathione S-transferase n=1 Tax=Methyloceanibacter sp. TaxID=1965321 RepID=A0A353IQF8_9HYPH) HSP 1 Score: 69.3 bits (168), Expect = 3.260e-11 Identity = 37/112 (33.04%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 1 LDCATDFGINVRPSFMEKDQAKKLEMREDLSVNFLPKWLASMEKQLASTGGIYFGE-KMTVADIMIALRVKGLKGGVLDGVPTTIADSY-PNLIALHDSVVGEPKIAAFIAK 330 +D D + P+ D KK RE+L+ +P +L + + LA GG YF + ++T+AD+ +A+ ++ L+ G+LD +PT + D P L+ V+ +P IAA+ AK Sbjct: 93 MDAVEDLTNEIVPTMFMPDDEKKAR-REELAEGPIPLYLKRLNQNLAVQGGRYFADDRLTIADLKVAMLIRQLRSGILDHIPTDLPDRVAPELVEHFQRVMKDPAIAAYYAK 203
BLAST of mRNA_M-pyrifera_M_contig8790.20431.1 vs. uniprot
Match: A0A2D9R0S2_9GAMM (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A2D9R0S2_9GAMM) HSP 1 Score: 68.2 bits (165), Expect = 1.210e-10 Identity = 38/111 (34.23%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 1 LDCATDFGINVRPSFMEKDQAKKLEMREDLSVNFLPKWLASMEKQLASTGGIYF-GEKMTVADIMIALRVKGLKGGVLDGVPTTIADSYPNLIALHDSVVGEPKIAAFIAK 330 +D TD + PS E DQAKK EMR +L+ + LPK+ +E L++ +F G+KM++ADI + + GVLD +P I + + L L+ V P++ + K Sbjct: 100 IDTVTDINELLNPSMRENDQAKKKEMRAELTNHDLPKYFGYLEDILSANNSHWFVGDKMSIADIAVWGLLGWFASGVLDDIPPEILNPFERLKKLYQEVSKTPRVREWKIK 210
BLAST of mRNA_M-pyrifera_M_contig8790.20431.1 vs. uniprot
Match: A0A0G4GKH4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GKH4_VITBC) HSP 1 Score: 65.5 bits (158), Expect = 9.280e-10 Identity = 39/106 (36.79%), Postives = 61/106 (57.55%), Query Frame = 1 Query: 16 DFGINVRPSFMEKDQAKKLEMREDLSVNFLPKWLASMEKQLASTGGIYFGEKMTVADIMIALRVKGLKGGVLDGVPTTIAD--SYPNLIALHDSVVGEPKIAAFIA 327 D + P+ MEKD+AKK+EM+++L+ PKW MEK LA GG G K+T+AD+ + + LK G++ G+P + D + L + +V G K+ A+ A Sbjct: 98 DIVTAMIPALMEKDEAKKMEMKKELADVTFPKWFGYMEK-LAGDGGYAVGSKLTIADLSLYNLMSWLKDGIV-GIPKDMFDHGKHTKLNKVFATVDGHEKVKAWNA 201
BLAST of mRNA_M-pyrifera_M_contig8790.20431.1 vs. uniprot
Match: A0A5B8XXI4_9DELT (Glutathione S-transferase n=2 Tax=Bradymonadales bacterium V1718 TaxID=2600177 RepID=A0A5B8XXI4_9DELT) HSP 1 Score: 64.3 bits (155), Expect = 4.030e-9 Identity = 32/101 (31.68%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 1 LDCATD-FGINVRPSFMEKDQAKKLEMREDLSVNFLPKWLASMEKQLASTGGIYF-GEKMTVADIMIALRVKGLKGGVLDGVPTTIADSYPNLIALHDSVV 297 +DC D + PSF E D K++ MR +L+ + + K L E +A +GG + G+++++AD+++A + G++ G LDG+ +YP + AL D+ + Sbjct: 152 IDCFNDTLATAMAPSFREPDLEKRIAMRRELAADTMAKVLKHTESLIARSGGPFLLGDRLSIADLVVACNIMGVRSGNLDGLSAEDVAAYPLINALTDAAL 252
BLAST of mRNA_M-pyrifera_M_contig8790.20431.1 vs. uniprot
Match: A0A0A8K8T6_9HYPH (Glutathione S-transferase n=3 Tax=Methyloceanibacter TaxID=1484898 RepID=A0A0A8K8T6_9HYPH) HSP 1 Score: 63.5 bits (153), Expect = 4.500e-9 Identity = 36/112 (32.14%), Postives = 57/112 (50.89%), Query Frame = 1 Query: 1 LDCATDFGINVRPSFMEKDQAKKLEMREDLSVNFLPKWLASMEKQLASTGGIYFGE-KMTVADIMIALRVKGLKGGVLDGVPTTIADSY-PNLIALHDSVVGEPKIAAFIAK 330 +D D + P+ D KK RE+L P +L + + LA GG YF + ++T+AD+ +A+ + G+LD VPT + + P LI V+ +P I A+ AK Sbjct: 93 MDAVEDLMNEIVPTMFMPDDEKKAR-REELVEGMFPLYLKRLNQNLADHGGRYFADDRLTIADLKVAMLTRQFTSGILDHVPTDLVEKVAPGLIEHFQRVMKDPSIKAYYAK 203
BLAST of mRNA_M-pyrifera_M_contig8790.20431.1 vs. uniprot
Match: A0A7S1XCV9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XCV9_9RHOD) HSP 1 Score: 62.4 bits (150), Expect = 1.120e-8 Identity = 33/106 (31.13%), Postives = 51/106 (48.11%), Query Frame = 1 Query: 16 DFGINVRPSFMEKDQAKKLEMREDLSVNFLPKWLASMEKQLASTG-GIYFGEKMTVADIMIALRVKGLKGGVLDGVPTTIADSYPNLIALHDSVVGEPKIAAFIAK 330 D + + E D KK+E+R L+V +LP +E LA G G GE +T AD+++ ++ G+LDG+P TI + + V PKI + K Sbjct: 98 DVNTQIGQTMRESDPDKKMEIRTQLAVKYLPAAFGRIEAILAKNGTGYCVGESLTTADLLLVALAHWIESGILDGIPKTILSEFEMVQKCKSLVYSHPKIKEWYEK 203 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8790.20431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8790.20431.1 >prot_M-pyrifera_M_contig8790.20431.1 ID=prot_M-pyrifera_M_contig8790.20431.1|Name=mRNA_M-pyrifera_M_contig8790.20431.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp MEKDQAKKLEMREDLSVNFLPKWLASMEKQLASTGGIYFGEKMTVADIMIback to top mRNA from alignment at M-pyrifera_M_contig8790:4903..9919- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8790.20431.1 ID=mRNA_M-pyrifera_M_contig8790.20431.1|Name=mRNA_M-pyrifera_M_contig8790.20431.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5017bp|location=Sequence derived from alignment at M-pyrifera_M_contig8790:4903..9919- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8790:4903..9919- >mRNA_M-pyrifera_M_contig8790.20431.1 ID=mRNA_M-pyrifera_M_contig8790.20431.1|Name=mRNA_M-pyrifera_M_contig8790.20431.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig8790:4903..9919- (Macrocystis pyrifera P11B4 male)back to top |