mRNA_M-pyrifera_M_contig87815.20406.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig87815.20406.1
Unique NamemRNA_M-pyrifera_M_contig87815.20406.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig87815.20406.1 vs. uniprot
Match: A0A2E7K6Y9_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K6Y9_9PLAN)

HSP 1 Score: 544 bits (1401), Expect = 7.770e-184
Identity = 266/275 (96.73%), Postives = 271/275 (98.55%), Query Frame = 1
Query:    1 FIVDGFTFGLAPRPRGTLLLDPDSKALSLKVQTEGAAIRDPLWNDLEDVKTPQMIQKNRLRSYPRAGRTLRTPTFEVKGSVAYRVKGSCWVYACVDSHRLLFGPLHGSTLKKVDADKAGKPLWVFHDLSRYNGHRVHLEFTPIGKEPLEVYQVKYAAKFPEPDLTSVSLQTPQVQQAFTDAFQEFCDTTDKPSSQTTALINWILAHPDLFSDPEDSDRKALQQSIRDYQSERDQLQKQIQNKSRTAMAIMDGSAENDHVLIRGSHQNQGPVVERR 825
            FIVDGFTFGLAPRPRGTLLLDPDSKALSLKVQTEGAAIRDPLWNDLEDVKTPQMIQKNRLRSYPRAGRTLRTPTFEVKGSVAYRVKGSCWVYACVDSHRLLFGPLHGSTLKKVDADKAGKPLWVFHDLSRYNGHRVHLEFTPIGK+PLEVYQVKYAA FPEPDLTS+SLQTPQVQQAF DAFQEFCDTTDKPSSQTTALINW+L HPDLFS+PEDSDRKALQQ+IRDY SERDQLQKQIQNKSRTAMAIMDGSAENDHVLIRGSHQNQGPVVERR
Sbjct:  537 FIVDGFTFGLAPRPRGTLLLDPDSKALSLKVQTEGAAIRDPLWNDLEDVKTPQMIQKNRLRSYPRAGRTLRTPTFEVKGSVAYRVKGSCWVYACVDSHRLLFGPLHGSTLKKVDADKAGKPLWVFHDLSRYNGHRVHLEFTPIGKDPLEVYQVKYAADFPEPDLTSISLQTPQVQQAFKDAFQEFCDTTDKPSSQTTALINWVLTHPDLFSNPEDSDRKALQQAIRDYHSERDQLQKQIQNKSRTAMAIMDGSAENDHVLIRGSHQNQGPVVERR 811          
BLAST of mRNA_M-pyrifera_M_contig87815.20406.1 vs. uniprot
Match: A0A518AB43_9PLAN (Planctomycete cytochrome C n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AB43_9PLAN)

HSP 1 Score: 470 bits (1209), Expect = 3.260e-155
Identity = 230/275 (83.64%), Postives = 249/275 (90.55%), Query Frame = 1
Query:    1 FIVDGFTFGLAPRPRGTLLLDPDSKALSLKVQTEGAAIRDPLWNDLEDVKTPQMIQKNRLRSYPRAGRTLRTPTFEVKGSVAYRVKGSCWVYACVDSHRLLFGPLHGSTLKKVDADKAGKPLWVFHDLSRYNGHRVHLEFTPIGKEPLEVYQVKYAAKFPEPDLTSVSLQTPQVQQAFTDAFQEFCDTTDKPSSQTTALINWILAHPDLFSDPEDSDRKALQQSIRDYQSERDQLQKQIQNKSRTAMAIMDGSAENDHVLIRGSHQNQGPVVERR 825
            FI DGF+FGLAPR RG LLL P    + L VQ EGAA+RD LWNDLED+KTPQM QKNRLRSYPRAGRTLRTPTFEVKGSVAYRVKGSCWVYACVDSHRLLFGPLHGSTLKKV ADK GKPLWVFHDLSRY GHRVHLEFTPI +EPLEVYQVK+AA+ PEPDLTSVSL+  QVQQAFT+AF+EFCDT  KPSSQT ALINW+LAHPDLFSDP+  +RKALQQ+I+D+QS+RDQL++QIQNKSRTAMAIMDGSAENDHVLIRGSHQN GPVVERR
Sbjct:  537 FISDGFSFGLAPRHRGILLLKPTDNPIPLTVQLEGAAVRDSLWNDLEDIKTPQMNQKNRLRSYPRAGRTLRTPTFEVKGSVAYRVKGSCWVYACVDSHRLLFGPLHGSTLKKVQADKTGKPLWVFHDLSRYKGHRVHLEFTPIDQEPLEVYQVKHAAQGPEPDLTSVSLKNQQVQQAFTNAFKEFCDTPVKPSSQTVALINWVLAHPDLFSDPDSQERKALQQAIQDFQSQRDQLKQQIQNKSRTAMAIMDGSAENDHVLIRGSHQNPGPVVERR 811          
BLAST of mRNA_M-pyrifera_M_contig87815.20406.1 vs. uniprot
Match: A0A518IHE6_9PLAN (Planctomycete cytochrome C n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IHE6_9PLAN)

HSP 1 Score: 455 bits (1170), Expect = 2.080e-149
Identity = 218/275 (79.27%), Postives = 246/275 (89.45%), Query Frame = 1
Query:    1 FIVDGFTFGLAPRPRGTLLLDPDSKALSLKVQTEGAAIRDPLWNDLEDVKTPQMIQKNRLRSYPRAGRTLRTPTFEVKGSVAYRVKGSCWVYACVDSHRLLFGPLHGSTLKKVDADKAGKPLWVFHDLSRYNGHRVHLEFTPIGKEPLEVYQVKYAAKFPEPDLTSVSLQTPQVQQAFTDAFQEFCDTTDKPSSQTTALINWILAHPDLFSDPEDSDRKALQQSIRDYQSERDQLQKQIQNKSRTAMAIMDGSAENDHVLIRGSHQNQGPVVERR 825
            FI DGFTFGLAPRPRGTL L+P +K L L VQ EGAA+RDPLWNDLEDVK+PQM QKN+LRSYPRAG+TLRTPTFEV+GSVAYRVKGSCWVYACVDSHRLLFGPLHGSTLKKV ADK+GKPLWVFHDLSRY GHRVHLEFTPI + PLE+YQVK AA+FPEPDLTSVSL++PQ Q+AFTDAF EF DT DKP+ Q  +LINW+L HPDLFS+P   +R  L++ I+DYQ++RD+L++ IQ KS+TAMAIMDGSAENDHVLIRGSHQNQGPVVERR
Sbjct:  537 FITDGFTFGLAPRPRGTLQLNPTNKQLPLTVQLEGAAVRDPLWNDLEDVKSPQMNQKNKLRSYPRAGKTLRTPTFEVQGSVAYRVKGSCWVYACVDSHRLLFGPLHGSTLKKVTADKSGKPLWVFHDLSRYKGHRVHLEFTPIDQSPLEIYQVKNAAQFPEPDLTSVSLKSPQAQKAFTDAFHEFFDTLDKPAPQAASLINWMLTHPDLFSEPNSPERLTLKKEIKDYQTQRDKLKQAIQTKSQTAMAIMDGSAENDHVLIRGSHQNQGPVVERR 811          
BLAST of mRNA_M-pyrifera_M_contig87815.20406.1 vs. uniprot
Match: A0A517VIQ9_9PLAN (Planctomycete cytochrome C n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517VIQ9_9PLAN)

HSP 1 Score: 385 bits (988), Expect = 1.490e-122
Identity = 187/275 (68.00%), Postives = 216/275 (78.55%), Query Frame = 1
Query:    1 FIVDGFTFGLAPRPRGTLLLDPDSKALSLKVQTEGAAIRDPLWNDLEDVKTPQMIQKNRLRSYPRAGRTLRTPTFEVKGSVAYRVKGSCWVYACVDSHRLLFGPLHGSTLKKVDADKAGKPLWVFHDLSRYNGHRVHLEFTPIGKEPLEVYQVKYAAKFPEPDLTSVSLQTPQVQQAFTDAFQEFCDTTDKPSSQTTALINWILAHPDLFSDPEDSDRKALQQSIRDYQSERDQLQKQIQNKSRTAMAIMDGSAENDHVLIRGSHQNQGPVVERR 825
            FI DGF FG+APR +GTL+LD       L  QTEGAA RDPLWNDL D K+PQ+ QKN+LRSYPRAGRTLRTPTFEV+G+V YRVKG CWVYACVDSHRLLFGPLHGSTLKKV A   GKP+W+ HDLSRY GHRVHLEFTPI + PLEVYQV+  A FPEPDLT+VSL  PQV      AF EF      P+SQ+ AL+NW+L HPDLFS+P+   R+ L+  I D+Q +R+ L+K ++  S+TAMAIMDGSAENDHVLIRGSHQN GP+VERR
Sbjct:  541 FITDGFIFGMAPRSQGTLVLDSSGTLPVLLAQTEGAARRDPLWNDLVDTKSPQLNQKNKLRSYPRAGRTLRTPTFEVQGAVNYRVKGDCWVYACVDSHRLLFGPLHGSTLKKVQASPHGKPVWITHDLSRYKGHRVHLEFTPIDQSPLEVYQVRQGASFPEPDLTTVSLAGPQVPLDLETAFDEFVSGKSDPTSQSVALVNWVLTHPDLFSEPQSPARQDLKAGIDDWQQQRNALKKSVRTASQTAMAIMDGSAENDHVLIRGSHQNTGPLVERR 815          
BLAST of mRNA_M-pyrifera_M_contig87815.20406.1 vs. uniprot
Match: A0A517VT78_9PLAN (Planctomycete cytochrome C n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VT78_9PLAN)

HSP 1 Score: 383 bits (984), Expect = 4.950e-122
Identity = 181/275 (65.82%), Postives = 226/275 (82.18%), Query Frame = 1
Query:    1 FIVDGFTFGLAPRPRGTLLLDPDSKALSLKVQTEGAAIRDPLWNDLEDVKTPQMIQKNRLRSYPRAGRTLRTPTFEVKGSVAYRVKGSCWVYACVDSHRLLFGPLHGSTLKKVDADKAGKPLWVFHDLSRYNGHRVHLEFTPIGKEPLEVYQVKYAAKFPEPDLTSVSLQTPQVQQAFTDAFQEFCDTTDKPSSQTTALINWILAHPDLFSDPEDSDRKALQQSIRDYQSERDQLQKQIQNKSRTAMAIMDGSAENDHVLIRGSHQNQGPVVERR 825
            FI DGFTFGLAP+PRGTL+LDP ++ + L +  EGAA RD LW+D+ D  +P+M QKN+LRS+PR+GRTLRTPTFEV+G V+YRVKGSCWVYACVDSHR+LFGPLHGSTLKKV A+   +P W+ HDLSRY GHR+HLEFT + KEPLEVYQVK+AA  PE  LTSVSL+T +VQ+AF  AF+E+ D+  +PS+QT +L+NW+L HP+LFS+    +R+AL + I +Y+  R+QL+  IQ KS+TAMAIMDGS ENDHVLIRGSHQN GPV++RR
Sbjct:  536 FITDGFTFGLAPQPRGTLVLDPSNQHIPLSLLLEGAARRDSLWDDIADTPSPKMNQKNKLRSFPRSGRTLRTPTFEVRGPVSYRVKGSCWVYACVDSHRMLFGPLHGSTLKKVSANAQHQPQWITHDLSRYKGHRIHLEFTALDKEPLEVYQVKHAAPHPEQSLTSVSLKTVKVQKAFETAFEEYFDSDQQPSAQTVSLLNWVLTHPELFSESGSKERQALSKEIEEYKKLREQLKHSIQTKSQTAMAIMDGSTENDHVLIRGSHQNPGPVIKRR 810          
BLAST of mRNA_M-pyrifera_M_contig87815.20406.1 vs. uniprot
Match: A0A350K920_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K920_9PLAN)

HSP 1 Score: 382 bits (982), Expect = 1.120e-121
Identity = 188/275 (68.36%), Postives = 216/275 (78.55%), Query Frame = 1
Query:    1 FIVDGFTFGLAPRPRGTLLLDPDSKALSLKVQTEGAAIRDPLWNDLEDVKTPQMIQKNRLRSYPRAGRTLRTPTFEVKGSVAYRVKGSCWVYACVDSHRLLFGPLHGSTLKKVDADKAGKPLWVFHDLSRYNGHRVHLEFTPIGKEPLEVYQVKYAAKFPEPDLTSVSLQTPQVQQAFTDAFQEFCDTTDKPSSQTTALINWILAHPDLFSDPEDSDRKALQQSIRDYQSERDQLQKQIQNKSRTAMAIMDGSAENDHVLIRGSHQNQGPVVERR 825
            FI DGF FG+APR RGTL+L+       L  QTEGAA RDPLWNDL D K+PQ+ QKNRLRSYPRAGRTLRTPTFEV+G+V YRVKG CWVYACVDSHRLLFGPLHGSTLKKV A   GKP+WV HDLSRY GHRVHLEFTPI + PLEVYQV++ A  PEPDLT+VSL   +V  A   AF EF      P+SQ+ AL+NW+L HPDLFS+P+   R+ L+  I D+Q +R+ L+K I+  S+TAMAIMDGSAENDHVLIRGSHQN GP+VERR
Sbjct:  541 FITDGFIFGMAPRSRGTLVLESSDTLPVLLAQTEGAARRDPLWNDLVDTKSPQLNQKNRLRSYPRAGRTLRTPTFEVQGAVNYRVKGDCWVYACVDSHRLLFGPLHGSTLKKVQATPDGKPVWVTHDLSRYKGHRVHLEFTPIDQSPLEVYQVRHGASHPEPDLTTVSLTGSKVPLALETAFDEFVSGKPDPTSQSVALVNWVLQHPDLFSEPQSPARQDLKAGIEDWQQQRNTLKKSIRTASQTAMAIMDGSAENDHVLIRGSHQNTGPLVERR 815          
BLAST of mRNA_M-pyrifera_M_contig87815.20406.1 vs. uniprot
Match: A0A2E2C435_9PLAN (Uncharacterized protein n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C435_9PLAN)

HSP 1 Score: 379 bits (973), Expect = 2.330e-120
Identity = 186/275 (67.64%), Postives = 216/275 (78.55%), Query Frame = 1
Query:    1 FIVDGFTFGLAPRPRGTLLLDPDSKALSLKVQTEGAAIRDPLWNDLEDVKTPQMIQKNRLRSYPRAGRTLRTPTFEVKGSVAYRVKGSCWVYACVDSHRLLFGPLHGSTLKKVDADKAGKPLWVFHDLSRYNGHRVHLEFTPIGKEPLEVYQVKYAAKFPEPDLTSVSLQTPQVQQAFTDAFQEFCDTTDKPSSQTTALINWILAHPDLFSDPEDSDRKALQQSIRDYQSERDQLQKQIQNKSRTAMAIMDGSAENDHVLIRGSHQNQGPVVERR 825
            FI DGFTFGL+ R  GTL+LDP S  L+L  QTEGAA RDPLWN+L D  +PQ+ QKN+LR+YPRAGRTLRTPTFEV+G+V YRVKG+CWVYACVDSHRLLFGPLHGSTLKKV A   GKPLWV HDLSRY GHRVHLEFTPI + PLEVYQ+K+AA FPE DL  V+L   +V  A   AF EF      PSS++ AL+NW+L HPDLFS+P+   R+ L+  I  +Q +R+ L+K IQ  S+TAMAIMDG+AENDHVLIRGSHQN GPVV RR
Sbjct:  541 FITDGFTFGLSAREPGTLVLDPSSAPLNLFAQTEGAARRDPLWNELVDTPSPQLNQKNKLRTYPRAGRTLRTPTFEVQGAVNYRVKGNCWVYACVDSHRLLFGPLHGSTLKKVQASPDGKPLWVTHDLSRYKGHRVHLEFTPIDQSPLEVYQIKHAATFPEADLVKVNLAGAEVPLALQTAFNEFVSGKSAPSSRSVALVNWVLTHPDLFSEPQSPARQQLKAEIDTWQQQREGLKKSIQTTSQTAMAIMDGNAENDHVLIRGSHQNPGPVVPRR 815          
BLAST of mRNA_M-pyrifera_M_contig87815.20406.1 vs. uniprot
Match: A3ZLZ4_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 TaxID=314230 RepID=A3ZLZ4_9BACT)

HSP 1 Score: 172 bits (437), Expect = 3.910e-45
Identity = 109/288 (37.85%), Postives = 159/288 (55.21%), Query Frame = 1
Query:   10 DGFTFGLAPRPRGTLLLDPDSKALSLKVQTEGAAIRDPLWNDLEDVKTPQMIQKNRLRSYPRAGRTLRTPTFEVK-GSVAYRVKGSCWVYACVDSHRLLFGPLHGSTLKKVDADKAGKPLWVFHDLSRYNGHRVHLEFTPIGKEPLEVYQVKYAAKFPEPD------LTSVSLQTPQVQQAFTDA-----FQEFCDTT-----DKPSSQTTALINWILAHPDLFSDPEDSDRKALQQSIRDYQSERDQLQKQIQNKSRTAMAIMDGSAENDHVLIRGSHQNQGPVVER 822
            +G+ FGLAP+  G L L  D   + + V+T GAA+RD  WN L   K  Q  Q  ++ ++ +AGRT+RTPTFE+  G V Y V+GS   +A +DSHR++ GPLHG++L     D A  P W+ HDL  Y GHR+HLEF+P G EPLE+ QV   A  P  D      L  + L      Q  +DA     F +F +       D        L +W++ +  L  D +      L+Q   +++++  +L +QI+ +SR A A+ DGS EN+ V+IRG+ +N G   +R
Sbjct:  528 NGYAFGLAPQRIGQLQLSTDG--MPIGVRTAGAAVRDVRWNKLGRAKDVQHEQ-GKIANWDQAGRTVRTPTFELTDGRVYYLVRGSGRAFAVIDSHRMINGPLHGASLHTWKQDAAAGPQWITHDLRDYQGHRIHLEFSPEGDEPLEILQVAEGAAAPRYDAPTTVPLAGIVLDPNDDSQQPSDARLANAFADFLNRAAASIGDSAQPAAALLADWLVKNRSLIFDHDRDLDIQLRQIAENHKTQEAELVQQIRFRSRLAPAMWDGSGENERVMIRGATKNLGDEAQR 812          
BLAST of mRNA_M-pyrifera_M_contig87815.20406.1 vs. uniprot
Match: A0A5C5W629_9PLAN (Planctomycete cytochrome C n=2 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5W629_9PLAN)

HSP 1 Score: 168 bits (426), Expect = 1.090e-43
Identity = 110/275 (40.00%), Postives = 152/275 (55.27%), Query Frame = 1
Query:    1 FIVDGFTFGLAPRPRGTLLLDPDSKALSLKVQTEGAAIRDPLWNDLEDVKTPQMIQKNRLRSYPRAGRTLRTPTFEVK-GSVAYRVKGSCWVYACVDSHRLLFGPLHGSTLKKVDADKAGKPLWVFHDLSRYNGHRVHLEFTPIGKEPLEVYQVKYAAKFPEPDLTSVSLQTPQVQQAFTDAFQEFCDTTDKPSSQTTALINWILAHPDLFSDPEDSDRKALQQSIRDYQSERDQLQKQIQNKSRTAMAIMDGSAENDHVLIRGSHQNQGPVVER 822
            F+ DGF +G  P+  G      +   LSL++ TE AAI DP+WN+LE V    +  K+RL ++PR+GRTLRTPTF V  G+VA RV+G   V ACVDSHRL+ GPLHG T+ K+   K G   W   +L RY GHR+HLEFTP   + L+V  V   A             TP+ +Q     F      +D+ +++  A +   L          D D   L   I ++++ER+ LQ QI  +S+ AMA+MDG+ E+  +LIRG+    G  V R
Sbjct:  457 FMQDGFIYGARPKRAGEFYWSDEGGELSLRMCTEDAAISDPIWNELESVWEKGVHNKSRLVTFPRSGRTLRTPTFAVTDGNVACRVRGEGHVVACVDSHRLIAGPLHGVTIAKI---KPGSE-WTHLNLQRYVGHRIHLEFTPSEGKQLQVSLVTRGA-------------TPEQRQELGRRF------SDQLTAEQVAAVESFL----------DEDVSDL---IANWKTEREHLQSQIMTRSQLAMAMMDGTGEDGRILIRGNSSKPGDQVPR 695          
BLAST of mRNA_M-pyrifera_M_contig87815.20406.1 vs. uniprot
Match: A0A2E9VW02_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E9VW02_9PLAN)

HSP 1 Score: 166 bits (420), Expect = 6.980e-43
Identity = 107/277 (38.63%), Postives = 147/277 (53.07%), Query Frame = 1
Query:    1 FIVDGFTFGLAPRPRGTLLLDPDSKALSLKVQTEGAAIRDPLWNDLEDVKTPQMIQKNRLRSYPRAGRTLRTPTFEVK-GSVAYRVKGSCWVYACVDSHRLLFGPLHGSTLKKVDADKAGKPLWVFHDLSRYNGHRVHLEFTPIGKEPLEVYQVKYAAKFPEPDLTSVSLQTPQVQQAFTDAFQEFCDTTDKPSSQTTAL-INWILAHPDLFSDPEDSDRKALQQSIRDYQSERDQLQKQIQNKSRTAMAIMDGSAENDHVLIRGSHQNQGPVVERR 825
            ++ DGF FGL PR  G  LL  +S    L +    AA  D  WN LE V       ++RL   PR+GRTLRTPTF V  G V+ RV GS +V ACVDSHRL+ GPLH  T++++  ++     WV  +L RY GHR+HLEFTP  K  LEV  V            + +    Q++Q          D       Q+  + +N  LA P   SD        +   ++ +  E+ +L++Q+Q KS  AMA++DG+ E+  +LIRGS  N GP+V RR
Sbjct:  449 YLQDGFVFGLRPRKAGEYLLTENSGQPELTLALNDAAASDSFWNGLESVSESPTQMRDRLAKIPRSGRTLRTPTFSVDDGIVSARVNGSGYVVACVDSHRLVAGPLHNETIQEIKPEQT----WVQLNLKRYTGHRIHLEFTPAEKAQLEVLCVVQG---------NDAAILKQIEQE---------DERQAAEVQSQIIELNERLAEPGTVSDQ-------VADILQKWTEEKRKLKEQVQQKSHLAMAMLDGTGEDGPLLIRGSSSNPGPIVSRR 696          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87815.20406.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7K6Y9_9PLAN7.770e-18496.73Uncharacterized protein n=6 Tax=Gimesia TaxID=1649... [more]
A0A518AB43_9PLAN3.260e-15583.64Planctomycete cytochrome C n=3 Tax=Gimesia panaree... [more]
A0A518IHE6_9PLAN2.080e-14979.27Planctomycete cytochrome C n=2 Tax=Gimesia TaxID=1... [more]
A0A517VIQ9_9PLAN1.490e-12268.00Planctomycete cytochrome C n=5 Tax=Gimesia TaxID=1... [more]
A0A517VT78_9PLAN4.950e-12265.82Planctomycete cytochrome C n=2 Tax=Gimesia aquarii... [more]
A0A350K920_9PLAN1.120e-12168.36Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A2E2C435_9PLAN2.330e-12067.64Uncharacterized protein n=4 Tax=Planctomycetaceae ... [more]
A3ZLZ4_9BACT3.910e-4537.85Uncharacterized protein n=1 Tax=Blastopirellula ma... [more]
A0A5C5W629_9PLAN1.090e-4340.00Planctomycete cytochrome C n=2 Tax=Thalassoglobus ... [more]
A0A2E9VW02_9PLAN6.980e-4338.63Uncharacterized protein n=2 Tax=Planctomycetaceae ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87815contigM-pyrifera_M_contig87815:3..827 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score385.6
Seed ortholog evalue2e-104
Seed eggNOG ortholog344747.PM8797T_20993
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Planctomycete cytochrome C
EggNOG OGs2IXBQ@203682,COG2010@1,COG2010@2
COG Functional cat.C
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size825
Cds size825
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816787.7228396-CDS-M-pyrifera_M_contig87815:2..8271622816787.7228396-CDS-M-pyrifera_M_contig87815:2..827Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87815 3..827 -
1692278178.5682094-CDS-M-pyrifera_M_contig87815:2..8271692278178.5682094-CDS-M-pyrifera_M_contig87815:2..827Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87815 3..827 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87815.20406.1prot_M-pyrifera_M_contig87815.20406.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig87815 3..827 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig87815.20406.1

>prot_M-pyrifera_M_contig87815.20406.1 ID=prot_M-pyrifera_M_contig87815.20406.1|Name=mRNA_M-pyrifera_M_contig87815.20406.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=275bp
FIVDGFTFGLAPRPRGTLLLDPDSKALSLKVQTEGAAIRDPLWNDLEDVK
TPQMIQKNRLRSYPRAGRTLRTPTFEVKGSVAYRVKGSCWVYACVDSHRL
LFGPLHGSTLKKVDADKAGKPLWVFHDLSRYNGHRVHLEFTPIGKEPLEV
YQVKYAAKFPEPDLTSVSLQTPQVQQAFTDAFQEFCDTTDKPSSQTTALI
NWILAHPDLFSDPEDSDRKALQQSIRDYQSERDQLQKQIQNKSRTAMAIM
DGSAENDHVLIRGSHQNQGPVVERR
back to top

mRNA from alignment at M-pyrifera_M_contig87815:3..827-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig87815.20406.1 ID=mRNA_M-pyrifera_M_contig87815.20406.1|Name=mRNA_M-pyrifera_M_contig87815.20406.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=825bp|location=Sequence derived from alignment at M-pyrifera_M_contig87815:3..827- (Macrocystis pyrifera P11B4 male)
TTCATCGTCGACGGCTTCACCTTTGGACTGGCACCCCGTCCCCGGGGAAC GCTGCTGCTCGATCCCGACAGCAAAGCACTGTCGCTCAAAGTTCAGACTG AAGGTGCCGCGATCCGCGATCCCCTCTGGAATGATCTGGAAGATGTGAAA ACGCCACAGATGATCCAGAAAAACAGACTGCGTTCTTATCCCCGTGCCGG CCGGACACTCCGAACTCCCACGTTCGAAGTCAAAGGTTCCGTCGCGTACC GCGTCAAAGGTTCCTGCTGGGTCTATGCCTGCGTTGACTCACACCGCCTG CTCTTTGGTCCCCTGCACGGGTCCACTCTGAAAAAAGTTGACGCTGACAA AGCCGGTAAGCCTTTGTGGGTCTTTCATGATCTCTCCCGCTACAACGGAC ATCGCGTGCACCTCGAGTTCACGCCCATCGGCAAAGAGCCACTCGAAGTC TACCAGGTGAAATATGCAGCCAAGTTCCCCGAACCCGATCTGACCTCGGT CAGTCTCCAGACGCCACAGGTGCAACAGGCCTTCACAGACGCGTTTCAGG AATTCTGTGACACGACAGACAAACCTTCTTCGCAGACGACTGCATTGATC AACTGGATTCTCGCCCATCCCGACCTGTTCTCCGATCCGGAAGATTCCGA CAGGAAAGCCCTGCAGCAGTCGATCCGCGATTATCAGTCCGAGCGCGATC AACTGCAGAAACAGATTCAAAACAAATCCCGCACCGCGATGGCCATCATG GATGGCAGTGCTGAGAACGACCACGTCCTGATTCGGGGCAGCCACCAGAA TCAGGGCCCTGTCGTAGAACGTCGT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig87815:3..827-

>mRNA_M-pyrifera_M_contig87815.20406.1 ID=mRNA_M-pyrifera_M_contig87815.20406.1|Name=mRNA_M-pyrifera_M_contig87815.20406.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1650bp|location=Sequence derived from alignment at M-pyrifera_M_contig87815:3..827- (Macrocystis pyrifera P11B4 male)
TTCATCGTCGACGGCTTCACCTTTGGACTGGCACCCCGTCCCCGGGGAAC
GCTGCTGCTCGATCCCGACAGCAAAGCACTGTCGCTCAAAGTTCAGACTG
AAGGTGCCGCGATCCGCGATCCCCTCTGGAATGATCTGGAAGATGTGAAA
ACGCCACAGATGATCCAGAAAAACAGACTGCGTTCTTATCCCCGTGCCGG
CCGGACACTCCGAACTCCCACGTTCGAAGTCAAAGGTTCCGTCGCGTACC
GCGTCAAAGGTTCCTGCTGGGTCTATGCCTGCGTTGACTCACACCGCCTG
CTCTTTGGTCCCCTGCACGGGTCCACTCTGAAAAAAGTTGACGCTGACAA
AGCCGGTAAGCCTTTGTGGGTCTTTCATGATCTCTCCCGCTACAACGGAC
ATCGCGTGCACCTCGAGTTCACGCCCATCGGCAAAGAGCCACTCGAAGTC
TACCAGGTGAAATATGCAGCCAAGTTCCCCGAACCCGATCTGACCTCGGT
CAGTCTCCAGACGCCACAGGTGCAACAGGCCTTCACAGACGCGTTTCAGG
AATTCTGTGACACGACAGACAAACCTTCTTCGCAGACGACTGCATTGATC
AACTGGATTCTCGCCCATCCCGACCTGTTCTCCGATCCGGAAGATTCCGA
CAGGAAAGCCCTGCAGCAGTCGATCCGCGATTATCAGTCCGAGCGCGATC
AACTGCAGAAACAGATTCAAAACAAATCCCGCACCGCGATGGCCATCATG
GATGGCAGTGCTGAGAACGACCACGTCCTGATTCGGGGCAGCCACCAGAA
TCAGGGCCCTGTCGTAGAACGTCGTTTCATCGTCGACGGCTTCACCTTTG
GACTGGCACCCCGTCCCCGGGGAACGCTGCTGCTCGATCCCGACAGCAAA
GCACTGTCGCTCAAAGTTCAGACTGAAGGTGCCGCGATCCGCGATCCCCT
CTGGAATGATCTGGAAGATGTGAAAACGCCACAGATGATCCAGAAAAACA
GACTGCGTTCTTATCCCCGTGCCGGCCGGACACTCCGAACTCCCACGTTC
GAAGTCAAAGGTTCCGTCGCGTACCGCGTCAAAGGTTCCTGCTGGGTCTA
TGCCTGCGTTGACTCACACCGCCTGCTCTTTGGTCCCCTGCACGGGTCCA
CTCTGAAAAAAGTTGACGCTGACAAAGCCGGTAAGCCTTTGTGGGTCTTT
CATGATCTCTCCCGCTACAACGGACATCGCGTGCACCTCGAGTTCACGCC
CATCGGCAAAGAGCCACTCGAAGTCTACCAGGTGAAATATGCAGCCAAGT
TCCCCGAACCCGATCTGACCTCGGTCAGTCTCCAGACGCCACAGGTGCAA
CAGGCCTTCACAGACGCGTTTCAGGAATTCTGTGACACGACAGACAAACC
TTCTTCGCAGACGACTGCATTGATCAACTGGATTCTCGCCCATCCCGACC
TGTTCTCCGATCCGGAAGATTCCGACAGGAAAGCCCTGCAGCAGTCGATC
CGCGATTATCAGTCCGAGCGCGATCAACTGCAGAAACAGATTCAAAACAA
ATCCCGCACCGCGATGGCCATCATGGATGGCAGTGCTGAGAACGACCACG
TCCTGATTCGGGGCAGCCACCAGAATCAGGGCCCTGTCGTAGAACGTCGT
back to top