mRNA_M-pyrifera_M_contig87661.20365.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig87661.20365.1
Unique NamemRNA_M-pyrifera_M_contig87661.20365.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig87661.20365.1 vs. uniprot
Match: A0A6I6AG53_9PLAN (Glycosyltransferase n=6 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AG53_9PLAN)

HSP 1 Score: 489 bits (1258), Expect = 1.060e-172
Identity = 245/256 (95.70%), Postives = 251/256 (98.05%), Query Frame = 1
Query:    1 STPLLEQQADFVMGAPENKSGSPLANWLVRPLTKEKDPWADCFALSRDKLEQCAEHLTPSSPYPALELLVKGEFEDVVTVPLDDHSPRKPASTVGEWFRLGVQLKTLYEFKFKNYAYFLQFAIVGSSGVIVNLLALSLLLDLMIRPLAVATAIWIAMTSNFLLNRHITFSYARHAPLLKQYLAYCGSCLTGNFFNWLTTMVLCGTFAFFAAQPLMAALIGILVGMGFNFLLCRLLVFGKQKTASSAPVNEPVENHS 768
            STPLLEQQADFVMG+PE KSGSPLANWLVRPLTKEKDPWADCFALSRDKLEQC EHLTPSSP+PALEL+VKGEFE+VVTVPL+DHS RKPASTVGEWFRLG QLKTLYEFKFKNYAYFLQFAIVGSSGVIVNLLALSLLLDLMIRPLAVATAIWIAMTSNFLLNRHITFSYARHAPLLKQYLAYCGSCLTGNFFNWLTTMVLCGTFAFFAAQPL+AALIGILVGMGFNFLLCRLLVFGKQKTAS APVNEPVENHS
Sbjct:  101 STPLLEQQADFVMGSPEIKSGSPLANWLVRPLTKEKDPWADCFALSRDKLEQCEEHLTPSSPHPALELIVKGEFEEVVTVPLNDHSARKPASTVGEWFRLGAQLKTLYEFKFKNYAYFLQFAIVGSSGVIVNLLALSLLLDLMIRPLAVATAIWIAMTSNFLLNRHITFSYARHAPLLKQYLAYCGSCLTGNFFNWLTTMVLCGTFAFFAAQPLVAALIGILVGMGFNFLLCRLLVFGKQKTASVAPVNEPVENHS 356          
BLAST of mRNA_M-pyrifera_M_contig87661.20365.1 vs. uniprot
Match: A0A517QBY0_9PLAN (GtrA-like protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517QBY0_9PLAN)

HSP 1 Score: 323 bits (827), Expect = 4.930e-107
Identity = 170/252 (67.46%), Postives = 193/252 (76.59%), Query Frame = 1
Query:    4 TPLLEQQADFVMGAPENKSGSPLANWLVRPLTKEKDPWADCFALSRDKLEQCAEHLTPSSPYPALELLVKGEFEDVVTVPLD--DHSPRKPASTVGEWFRLGVQLKTLYEFKFKNYAYFLQFAIVGSSGVIVNLLALSLLLDLMIRPLAVATAIWIAMTSNFLLNRHITFSYARHAPLLKQYLAYCGSCLTGNFFNWLTTMVLCGTFAFFAAQPLMAALIGILVGMGFNFLLCRLLVFGKQKTASSAPVNEP 753
            +PL +QQ DFV+      + S  A WL RPLTK K     CFA+SR++ EQC E L P+SP P LE LVK   + VV VPL   D    +   +  E  R GVQLK LYEFKFKNYAYFLQFAIVGSSGVIVNLLALSLLL+ MIRP+AVA AIWIAMTSNFLLNRH+TFSYARHAP+LKQYLAYCGSCLTGNFFNWLTT+VLCG+ ++FA + L+AALIGILVGMGFNFLLCRLLVFGK K  ++ P   P
Sbjct:  107 SPLQDQQTDFVLATFPGNTHSMFAGWLTRPLTKTKALQTGCFAISRNRFEQCREILNPASPQPVLEFLVKSRSQAVVEVPLPAGDLQSHQRGVSFSERVRWGVQLKELYEFKFKNYAYFLQFAIVGSSGVIVNLLALSLLLNWMIRPVAVAMAIWIAMTSNFLLNRHVTFSYARHAPILKQYLAYCGSCLTGNFFNWLTTLVLCGSISYFAERTLIAALIGILVGMGFNFLLCRLLVFGKHKADATVPKTNP 358          
BLAST of mRNA_M-pyrifera_M_contig87661.20365.1 vs. uniprot
Match: A0A517VSZ5_9PLAN (Undecaprenyl-phosphate mannosyltransferase n=4 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VSZ5_9PLAN)

HSP 1 Score: 238 bits (606), Expect = 1.100e-73
Identity = 131/256 (51.17%), Postives = 165/256 (64.45%), Query Frame = 1
Query:   10 LLEQQADFVMGAPENKSGSP-------------LANWLVRPLTKEKDPWADCFALSRDKLEQCAEHLTPSSPYPALELLVKGEFEDVVTVPLD--DHSPRKPASTVGEWFRLGVQLKTLYEFKFKNYAYFLQFAIVGSSGVIVNLLALSLLLDLMIRPLAVATAIWIAMTSNFLLNRHITFSYARHAPLLKQYLAYCGSCLTGNFFNWLTTMVLCGTFAFFAAQPLMAALIGILVGMGFNFLLCRLLVFGKQKTAS 732
            L  QQADFV+G+     GS              +A W+ RP T  KDP A  FAL R       E L P      LEL+VK    +++ +P+   D +      +  E       LK L+EFK++NYAYF QFA++G SGV+VNL+ALSLLL+   RP+A+A AIWI+M++NFLLNR+ITFSYAR+AP+LKQYL YC SCL G FFNWLTTMVLC +  +F  + L+AALIGI+VGM FNF+LCR  VF K KTAS
Sbjct:  102 LKNQQADFVIGSRYVNGGSTDETWGWFRKFNSKIATWMARPFTTVKDPMAGFFALHRQDFLNAREILNPVGYKIGLELMVKCRCRNIIEIPIHFTDRTQGSSKLSFKEQINYLKHLKRLFEFKYRNYAYFAQFAVIGCSGVVVNLVALSLLLNWFNRPVAIAVAIWISMSTNFLLNRNITFSYARYAPILKQYLGYCSSCLLGAFFNWLTTMVLCSSITYFEKRTLLAALIGIVVGMTFNFILCRYFVFSKHKTAS 357          
BLAST of mRNA_M-pyrifera_M_contig87661.20365.1 vs. uniprot
Match: A0A517RKL1_9PLAN (Undecaprenyl-phosphate mannosyltransferase n=3 Tax=Gimesia TaxID=1649453 RepID=A0A517RKL1_9PLAN)

HSP 1 Score: 236 bits (601), Expect = 6.960e-73
Identity = 138/256 (53.91%), Postives = 165/256 (64.45%), Query Frame = 1
Query:   10 LLEQQADFVMGA--------PEN-----KSGSPLANWLVRPLTKEKDPWADCFALSRDKLEQCAEHLTPSSPYPALELLVKGEFEDVVTVPLD--DHSPRKPASTVGEWFRLGVQLKTLYEFKFKNYAYFLQFAIVGSSGVIVNLLALSLLLDLMIRPLAVATAIWIAMTSNFLLNRHITFSYARHAPLLKQYLAYCGSCLTGNFFNWLTTMVLCGTFAFFAAQPLMAALIGILVGMGFNFLLCRLLVFGKQKTAS 732
            L  Q+ADFV+G+         EN     K  S +A WL RP T  KDP A  FA SR    Q  E L P      LELLVK     VV VP+   D +      +  E       LK L EFK++NYAYF+QFAI+G SGV VNL ALS+LL  +IRP+A+A AIWI+M++NFLLNR+ITFSYA+H+P+LKQY+ YCGSCLTG FFN LT   LC TF +F  + L+AA IGIL GM FNF+LCR LVF KQKTAS
Sbjct:  109 LKNQEADFVIGSRYVNGGSTEENWGWFRKLNSRIATWLARPFTNVKDPMAGFFAFSRHHFLQVREFLNPVGYKIGLELLVKCRCRKVVEVPIHFADRTQGTSKLSFKEQLSYLRHLKRLSEFKYRNYAYFVQFAIIGLSGVFVNLAALSVLLHWLIRPVAIAVAIWISMSTNFLLNRNITFSYAKHSPILKQYIQYCGSCLTGAFFNGLTAETLCRTFDYFDQRTLLAAFIGILTGMAFNFILCRYLVFAKQKTAS 364          
BLAST of mRNA_M-pyrifera_M_contig87661.20365.1 vs. uniprot
Match: A0A517VIU0_9PLAN (Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VIU0_9PLAN)

HSP 1 Score: 235 bits (599), Expect = 1.850e-72
Identity = 134/268 (50.00%), Postives = 168/268 (62.69%), Query Frame = 1
Query:   10 LLEQQADFVMGAPENKSGSP-------------LANWLVRPLTKEKDPWADCFALSRDKLEQCAEHLTPSSPYPALELLVKGEFEDVVTVPLD--DHSPRKPASTVGEWFRLGVQLKTLYEFKFKNYAYFLQFAIVGSSGVIVNLLALSLLLDLMIRPLAVATAIWIAMTSNFLLNRHITFSYARHAPLLKQYLAYCGSCLTGNFFNWLTTMVLCGTFAFFAAQPLMAALIGILVGMGFNFLLCRLLVFGKQKTASSAPVNEPVENHS 768
            L + Q DFV+G+   + GS              +A WL RP TK  DP A  FAL R    +  + L P      LEL+VK   ++V  +P+D  D        +  E  R    LK L++FKF+NYAYFLQFA++G +GV VNL  L+LL + MI P+AVA AIW +M++NFLLNR+ITFSYA+HAP+LKQYL YCGSCLTG  FNWLTTMVL  +F FF  + L+AA IGILVGMGFNFLLCR LVF K K A    + +    H+
Sbjct:  109 LNQPQTDFVIGSRYIEGGSTDQSWGWFRKWNSRVATWLSRPFTKASDPLAGFFALKRQSFLKSRQILNPVGYKIGLELIVKSRCQNVTEIPIDFADRVAGTSKLSFKEQLRYLKHLKRLFDFKFQNYAYFLQFALIGLTGVFVNLQMLALLSNWMISPIAVALAIWTSMSTNFLLNRNITFSYAKHAPILKQYLRYCGSCLTGAIFNWLTTMVLSRSFQFFEKRILLAAFIGILVGMGFNFLLCRYLVFSKHKPADETTLTDKELRHT 376          
BLAST of mRNA_M-pyrifera_M_contig87661.20365.1 vs. uniprot
Match: A0A350K8A3_9PLAN (Glycosyltransferase family 2 protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K8A3_9PLAN)

HSP 1 Score: 225 bits (574), Expect = 5.520e-69
Identity = 129/253 (50.99%), Postives = 163/253 (64.43%), Query Frame = 1
Query:   10 LLEQQADFVMGAPENKSG-------------SPLANWLVRPLTKEKDPWADCFALSRDKLEQCAEHLTPSSPYPALELLVKGEFEDVVTVPLD--DHSPRKPASTVGEWFRLGVQLKTLYEFKFKNYAYFLQFAIVGSSGVIVNLLALSLLLDLMIRPLAVATAIWIAMTSNFLLNRHITFSYARHAPLLKQYLAYCGSCLTGNFFNWLTTMVLCGTFAFFAAQPLMAALIGILVGMGFNFLLCRLLVFGKQK 723
            L ++QADFV+G+   + G             S +A WL RP T  +DP A  FA+ R    +  + L P      LEL+VK    +VV +P++  D        +  E  R    LK L++FK++NYAYF QFA++G +GV VNL  L+LL + MI P+AVA AIW +M++NFLLNR+ITFSYARH P LKQYL+YCGSCLTG  FNWLTTMVL  +F FF  + L+AA IGILVGMGFNFLLCR LVF K K
Sbjct:   59 LNQRQADFVIGSRYVEGGTTDQSWGWFRKWNSRVATWLSRPFTSARDPLAGFFAIKRQTYLKAHQILNPVGYKIGLELIVKCRCRNVVEIPIEFTDRVAGSSKLSFKEQLRYLKHLKRLFDFKYQNYAYFTQFALIGLTGVFVNLQMLALLSNWMISPIAVALAIWTSMSTNFLLNRNITFSYARHKPFLKQYLSYCGSCLTGAVFNWLTTMVLSRSFQFFEKRILLAAFIGILVGMGFNFLLCRYLVFSKHK 311          
BLAST of mRNA_M-pyrifera_M_contig87661.20365.1 vs. uniprot
Match: A6C518_9PLAN (Glycosyltransferase involved in cell wall biogenesis n=5 Tax=Gimesia TaxID=1649453 RepID=A6C518_9PLAN)

HSP 1 Score: 225 bits (574), Expect = 1.120e-68
Identity = 129/253 (50.99%), Postives = 163/253 (64.43%), Query Frame = 1
Query:   10 LLEQQADFVMGAPENKSG-------------SPLANWLVRPLTKEKDPWADCFALSRDKLEQCAEHLTPSSPYPALELLVKGEFEDVVTVPLD--DHSPRKPASTVGEWFRLGVQLKTLYEFKFKNYAYFLQFAIVGSSGVIVNLLALSLLLDLMIRPLAVATAIWIAMTSNFLLNRHITFSYARHAPLLKQYLAYCGSCLTGNFFNWLTTMVLCGTFAFFAAQPLMAALIGILVGMGFNFLLCRLLVFGKQK 723
            L ++QADFV+G+   + G             S +A WL RP T  +DP A  FA+ R    +  + L P      LEL+VK    +VV +P++  D        +  E  R    LK L++FK++NYAYF QFA++G +GV VNL  L+LL + MI P+AVA AIW +M++NFLLNR+ITFSYARH P LKQYL+YCGSCLTG  FNWLTTMVL  +F FF  + L+AA IGILVGMGFNFLLCR LVF K K
Sbjct:  109 LNQRQADFVIGSRYVEGGTTDQSWGWFRKWNSRVATWLSRPFTSARDPLAGFFAIKRQTYLKAHQILNPVGYKIGLELIVKCRCRNVVEIPIEFTDRVAGSSKLSFKEQLRYLKHLKRLFDFKYQNYAYFTQFALIGLTGVFVNLQMLALLSNWMISPIAVALAIWTSMSTNFLLNRNITFSYARHKPFLKQYLSYCGSCLTGAVFNWLTTMVLSRSFQFFEKRILLAAFIGILVGMGFNFLLCRYLVFSKHK 361          
BLAST of mRNA_M-pyrifera_M_contig87661.20365.1 vs. uniprot
Match: A0A355GET7_9PLAN (Glycosyltransferase family 2 protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A355GET7_9PLAN)

HSP 1 Score: 224 bits (570), Expect = 1.350e-67
Identity = 129/267 (48.31%), Postives = 166/267 (62.17%), Query Frame = 1
Query:   10 LLEQQADFVMGAPENKSGSP-------------LANWLVRPLTKEKDPWADCFALSRDKLEQCAEHLTPSSPYPALELLVKGEFEDVVTVPLD--DHSPRKPASTVGEWFRLGVQLKTLYEFKFKNYAYFLQFAIVGSSGVIVNLLALSLLLDLMIRPLAVATAIWIAMTSNFLLNRHITFSYARHAPLLKQYLAYCGSCLTGNFFNWLTTMVLCGTFAFFAAQPLMAALIGILVGMGFNFLLCRLLVFGKQKTASSAPVNEPVENH 765
            L ++  DFV+G+   + GS              +A WL RP T  +DP A  FA+ R   +Q  E L P      LEL+VK   ++VV +P+D  D        ++ E  R    LK L++FK++NYAYF QFA++G +GV VNL  L+LL   +I PLAVA AIW +M++NFLLNR+ITFSYA+H P+LKQYL+YCGSCLTG   NWLTTMVL  +F FF  + L+AA IGILVGMGFNFLLCR LVF + +    A   E    H
Sbjct:  152 LHQRPTDFVIGSRYIEGGSTAKNGGWTRKWKSRVATWLSRPFTSARDPLAGFFAIRRQSFQQVREILNPIGYKIGLELIVKCRCQNVVEIPVDFTDRVTGTSKFSLKEQLRFLKHLKRLFDFKYQNYAYFTQFALIGLTGVFVNLQMLALLSHWIISPLAVALAIWTSMSTNFLLNRNITFSYAKHQPVLKQYLSYCGSCLTGAVCNWLTTMVLSQSFPFFEQRILLAAFIGILVGMGFNFLLCRYLVFSRHEPEVEAATTEKELGH 418          
BLAST of mRNA_M-pyrifera_M_contig87661.20365.1 vs. uniprot
Match: A0A517QPJ9_9PLAN (Undecaprenyl-phosphate mannosyltransferase n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QPJ9_9PLAN)

HSP 1 Score: 140 bits (352), Expect = 1.150e-35
Identity = 97/262 (37.02%), Postives = 136/262 (51.91%), Query Frame = 1
Query:   22 QADFVMGAPENKSGSPLANW-------------LVRPLTKEKDPWADCFALSRDKLEQCAEHLTPSSPYPALELLVKGEFEDVVTVPL--DDHSPRKPASTVGEWFRLGVQLKTLYEFKFKNYAYFLQFAIVGSSGVIVNLLALSLLLDL-MIRPLAVATAIWIAMTSNFLLNRHITFSYARHAPLLKQYLAYCGSCLTGNFFNWLTTMVLCGTFAFFAAQPLMAALIGILVGMGFNFLLCRLLVFGKQKTASSAPVNEPVE 759
            + DFV+G+   + GS   +W             LV+PLT  KDP A  FAL R   +   E L P      LEL+VK   + V  VP+   D    +   +  E       L  LY+FK+     F++F +VG SGV +NL AL++LL+  M+ P+A+A AIWIAM+ NFLLNR +TF       +  +Y+ +C + LTG   NW    +L  T   FA  P +A L+GI+ GM  NF LCR  VF  +K  +     EP++
Sbjct:  114 KTDFVIGSRYVEGGSTDDDWGVFRWLNSIIATGLVKPLTSAKDPMAGFFALRRSDFQAAYETLDPVGYKIGLELIVKCNCQKVAEVPIHFSDRQFGESKLSFKEQLNYLRHLTKLYDFKWPEATRFVRFGMVGFSGVFINLAALAVLLEFSMLAPVAMAVAIWIAMSWNFLLNREVTFHDRTTTNIGSEYVRFCMASLTGAALNWSVATLLWTTVPMFADSPTIAGLVGIVAGMFANFTLCRRFVFF-EKEQNGTQQQEPLK 374          
BLAST of mRNA_M-pyrifera_M_contig87661.20365.1 vs. uniprot
Match: A0A1Y1Q4U6_9GAMM (Uncharacterized protein n=1 Tax=Thiotrichaceae bacterium IS1 TaxID=1934244 RepID=A0A1Y1Q4U6_9GAMM)

HSP 1 Score: 136 bits (342), Expect = 2.470e-34
Identity = 90/251 (35.86%), Postives = 137/251 (54.58%), Query Frame = 1
Query:   13 LEQQADFVMGAPENKSG-------------SPLANWLVRPLTKEKDPWADCFALSRDKLEQCAEHLTPSSPYPALELLVKGEFEDVVTVPLDDHSPRKPASTVG--EWFRLGVQLKTLYEFKFKNYAYFLQFAIVGSSGVIVNLLALSLLLDL-MIRPLAVATAIWIAMTSNFLLNRHITFSYARHAPLLKQYLAYCGSCLTGNFFNWLTTMVLCGTFAFFAAQPLMAALIGILVGMGFNFLLCRLLVFGK 717
            L+  ADFV+G+   + G             S +A WL  P TK KDP +  F L R   E+    L P      LEL+VK   + V  +P+     +K  S +   +  +    L+ L+ ++++ +A+  QF +VG+SGV+VNLL L++L+   M   +A+A AI+++M SNF LNR  +FSYAR  PLL Q++ +  +C  G   N+ +T+ +  +F      P M ALIGIL GM FNF+  R ++F K
Sbjct:  120 LQSGADFVIGSRYVEGGTTDISWSLFRKLNSEVATWLAYPFTKAKDPMSGFFVLHRQTFERGQWSLNPIGYKIGLELIVKCHCQTVREIPIHFSDRQKGVSKLSLKQQLQYIQHLRRLFIYRYETWAHLAQFLVVGASGVVVNLLVLTVLVWWGMPISMAIALAIFVSMVSNFALNRRFSFSYARQGPLLTQFINFLTACSVGAIVNYFSTLFILKSFP--QLLPQMGALIGILAGMSFNFMASRFVIFKK 368          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87661.20365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I6AG53_9PLAN1.060e-17295.70Glycosyltransferase n=6 Tax=Gimesia TaxID=1649453 ... [more]
A0A517QBY0_9PLAN4.930e-10767.46GtrA-like protein n=2 Tax=Gimesia panareensis TaxI... [more]
A0A517VSZ5_9PLAN1.100e-7351.17Undecaprenyl-phosphate mannosyltransferase n=4 Tax... [more]
A0A517RKL1_9PLAN6.960e-7353.91Undecaprenyl-phosphate mannosyltransferase n=3 Tax... [more]
A0A517VIU0_9PLAN1.850e-7250.00Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabi... [more]
A0A350K8A3_9PLAN5.520e-6950.99Glycosyltransferase family 2 protein n=1 Tax=Planc... [more]
A6C518_9PLAN1.120e-6850.99Glycosyltransferase involved in cell wall biogenes... [more]
A0A355GET7_9PLAN1.350e-6748.31Glycosyltransferase family 2 protein n=2 Tax=Planc... [more]
A0A517QPJ9_9PLAN1.150e-3537.02Undecaprenyl-phosphate mannosyltransferase n=1 Tax... [more]
A0A1Y1Q4U6_9GAMM2.470e-3435.86Uncharacterized protein n=1 Tax=Thiotrichaceae bac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87661contigM-pyrifera_M_contig87661:2..772 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score225.7
Seed ortholog evalue2.4e-56
Seed eggNOG ortholog344747.PM8797T_20833
Preferred nameMA20_09515
KEGG rclassRC00005
KEGG koko:K00721
KEGG ReactionR01009
KEGG Pathwayko00510,ko01100,map00510,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.involved in cell wall biogenesis
EggNOG OGs2J0W6@203682,COG0463@1,COG0463@2,COG2246@1,COG2246@2
EC2.4.1.83
COG Functional cat.M
CAZyGT2
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Exons1
Model size771
Cds size771
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816785.7337365-CDS-M-pyrifera_M_contig87661:1..7721622816785.7337365-CDS-M-pyrifera_M_contig87661:1..772Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87661 2..772 +
1692278177.4522827-CDS-M-pyrifera_M_contig87661:1..7721692278177.4522827-CDS-M-pyrifera_M_contig87661:1..772Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87661 2..772 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87661.20365.1prot_M-pyrifera_M_contig87661.20365.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig87661 2..772 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig87661.20365.1

>prot_M-pyrifera_M_contig87661.20365.1 ID=prot_M-pyrifera_M_contig87661.20365.1|Name=mRNA_M-pyrifera_M_contig87661.20365.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=257bp
STPLLEQQADFVMGAPENKSGSPLANWLVRPLTKEKDPWADCFALSRDKL
EQCAEHLTPSSPYPALELLVKGEFEDVVTVPLDDHSPRKPASTVGEWFRL
GVQLKTLYEFKFKNYAYFLQFAIVGSSGVIVNLLALSLLLDLMIRPLAVA
TAIWIAMTSNFLLNRHITFSYARHAPLLKQYLAYCGSCLTGNFFNWLTTM
VLCGTFAFFAAQPLMAALIGILVGMGFNFLLCRLLVFGKQKTASSAPVNE
PVENHS*
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mRNA from alignment at M-pyrifera_M_contig87661:2..772+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig87661.20365.1 ID=mRNA_M-pyrifera_M_contig87661.20365.1|Name=mRNA_M-pyrifera_M_contig87661.20365.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=771bp|location=Sequence derived from alignment at M-pyrifera_M_contig87661:2..772+ (Macrocystis pyrifera P11B4 male)
AGCACTCCGCTGCTGGAGCAACAGGCTGATTTCGTGATGGGAGCCCCAGA GAATAAATCCGGTTCGCCACTCGCCAACTGGCTGGTTCGACCACTGACGA AGGAAAAAGATCCATGGGCGGACTGTTTTGCCCTCTCCCGGGACAAGCTT GAACAATGTGCGGAGCACCTCACCCCTTCAAGTCCGTACCCTGCCCTGGA ATTACTCGTCAAAGGGGAATTCGAGGATGTCGTCACAGTTCCACTTGATG ATCACTCTCCTCGCAAACCAGCGTCTACTGTGGGTGAATGGTTTCGACTG GGGGTTCAGCTGAAAACGCTGTACGAGTTCAAATTCAAGAACTACGCTTA CTTCCTGCAGTTCGCGATTGTCGGCTCTTCCGGAGTCATCGTGAACCTGT TGGCGCTTTCGCTGCTGCTGGATCTGATGATCCGCCCCCTCGCGGTGGCA ACTGCGATCTGGATTGCCATGACCAGCAACTTTCTGCTGAACCGACACAT CACATTTTCGTACGCGCGACATGCCCCGCTGCTGAAACAGTACCTGGCCT ACTGCGGCAGTTGCCTGACGGGGAATTTCTTCAACTGGCTGACCACGATG GTGCTGTGTGGTACGTTTGCTTTCTTTGCTGCCCAACCACTGATGGCAGC TCTCATCGGAATCCTGGTCGGCATGGGCTTTAATTTTCTGCTCTGCCGTC TACTCGTGTTCGGAAAACAGAAAACCGCAAGCTCAGCCCCCGTCAACGAG CCTGTCGAAAACCACTCTTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig87661:2..772+

>mRNA_M-pyrifera_M_contig87661.20365.1 ID=mRNA_M-pyrifera_M_contig87661.20365.1|Name=mRNA_M-pyrifera_M_contig87661.20365.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1542bp|location=Sequence derived from alignment at M-pyrifera_M_contig87661:2..772+ (Macrocystis pyrifera P11B4 male)
AGCACTCCGCTGCTGGAGCAACAGGCTGATTTCGTGATGGGAGCCCCAGA
GAATAAATCCGGTTCGCCACTCGCCAACTGGCTGGTTCGACCACTGACGA
AGGAAAAAGATCCATGGGCGGACTGTTTTGCCCTCTCCCGGGACAAGCTT
GAACAATGTGCGGAGCACCTCACCCCTTCAAGTCCGTACCCTGCCCTGGA
ATTACTCGTCAAAGGGGAATTCGAGGATGTCGTCACAGTTCCACTTGATG
ATCACTCTCCTCGCAAACCAGCGTCTACTGTGGGTGAATGGTTTCGACTG
GGGGTTCAGCTGAAAACGCTGTACGAGTTCAAATTCAAGAACTACGCTTA
CTTCCTGCAGTTCGCGATTGTCGGCTCTTCCGGAGTCATCGTGAACCTGT
TGGCGCTTTCGCTGCTGCTGGATCTGATGATCCGCCCCCTCGCGGTGGCA
ACTGCGATCTGGATTGCCATGACCAGCAACTTTCTGCTGAACCGACACAT
CACATTTTCGTACGCGCGACATGCCCCGCTGCTGAAACAGTACCTGGCCT
ACTGCGGCAGTTGCCTGACGGGGAATTTCTTCAACTGGCTGACCACGATG
GTGCTGTGTGGTACGTTTGCTTTCTTTGCTGCCCAACCACTGATGGCAGC
TCTCATCGGAATCCTGGTCGGCATGGGCTTTAATTTTCTGCTCTGCCGTC
TACTCGTGTTCGGAAAACAGAAAACCGCAAGCTCAGCCCCCGTCAACGAG
CCTGTCGAAAACCACTCTTAAAGCACTCCGCTGCTGGAGCAACAGGCTGA
TTTCGTGATGGGAGCCCCAGAGAATAAATCCGGTTCGCCACTCGCCAACT
GGCTGGTTCGACCACTGACGAAGGAAAAAGATCCATGGGCGGACTGTTTT
GCCCTCTCCCGGGACAAGCTTGAACAATGTGCGGAGCACCTCACCCCTTC
AAGTCCGTACCCTGCCCTGGAATTACTCGTCAAAGGGGAATTCGAGGATG
TCGTCACAGTTCCACTTGATGATCACTCTCCTCGCAAACCAGCGTCTACT
GTGGGTGAATGGTTTCGACTGGGGGTTCAGCTGAAAACGCTGTACGAGTT
CAAATTCAAGAACTACGCTTACTTCCTGCAGTTCGCGATTGTCGGCTCTT
CCGGAGTCATCGTGAACCTGTTGGCGCTTTCGCTGCTGCTGGATCTGATG
ATCCGCCCCCTCGCGGTGGCAACTGCGATCTGGATTGCCATGACCAGCAA
CTTTCTGCTGAACCGACACATCACATTTTCGTACGCGCGACATGCCCCGC
TGCTGAAACAGTACCTGGCCTACTGCGGCAGTTGCCTGACGGGGAATTTC
TTCAACTGGCTGACCACGATGGTGCTGTGTGGTACGTTTGCTTTCTTTGC
TGCCCAACCACTGATGGCAGCTCTCATCGGAATCCTGGTCGGCATGGGCT
TTAATTTTCTGCTCTGCCGTCTACTCGTGTTCGGAAAACAGAAAACCGCA
AGCTCAGCCCCCGTCAACGAGCCTGTCGAAAACCACTCTTAA
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