prot_M-pyrifera_M_contig87642.20355.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig87642.20355.1
Unique Nameprot_M-pyrifera_M_contig87642.20355.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length67
Homology
BLAST of mRNA_M-pyrifera_M_contig87642.20355.1 vs. uniprot
Match: D8LNW5_ECTSI (Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW5_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 3.980e-21
Identity = 50/67 (74.63%), Postives = 57/67 (85.07%), Query Frame = 0
Query:    1 LRFAVPDILDSVLCVAQGAVSPLAVVNDKECLATLAMDKGLIDADEVLVHPLRNDRSVRVKASDLVK 67
            LRFA    LDSVL V QGAVSPLAVVND E +A LAMDK +++A+EVLVHPLRNDRSVR+KA+DLVK
Sbjct:  270 LRFADAATLDSVLGVVQGAVSPLAVVNDVEGVARLAMDKSVMEAEEVLVHPLRNDRSVRIKAADLVK 336          
BLAST of mRNA_M-pyrifera_M_contig87642.20355.1 vs. uniprot
Match: A0A5D6Y8W5_9STRA (Proline--tRNA ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8W5_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.450e-10
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 0
Query:    1 LRFAVPDILDSVLCVAQGAVSPLAVVNDKECLATLAMDKGLIDADEVLVHPLRNDRSVRVKASDLVK 67
            LRFA  D+L+SVL V +GAVSPL V++D +    L +DK L+DA  V  HPLRNDR+  + ++ L++
Sbjct:   88 LRFAGEDVLESVLKVKKGAVSPLCVMHDTDNAVRLVLDKALVDAAVVHCHPLRNDRTYALASTALLQ 154          
BLAST of mRNA_M-pyrifera_M_contig87642.20355.1 vs. uniprot
Match: A0A7S3ANH3_9EUKA (Proline--tRNA ligase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ANH3_9EUKA)

HSP 1 Score: 64.7 bits (156), Expect = 1.450e-10
Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    2 RFAVPDILDSVLCVAQGAVSPLAVVNDKECLATLAMDKGLIDADEVLVHPLRNDRSVRVKASDLVK 67
            RFA  ++L  +L V QG+VSPLAV+ND     TL +DK L+ A+ V VHPLRND + ++   DL K
Sbjct:   90 RFATAEVLQELLGVQQGSVSPLAVMNDTTGAVTLCIDKELMQANYVGVHPLRNDMTNQISPDDLTK 155          
BLAST of mRNA_M-pyrifera_M_contig87642.20355.1 vs. uniprot
Match: A0A7S3H5B0_9STRA (Proline--tRNA ligase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H5B0_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 3.700e-10
Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 LRFAVPDILDSVLCVAQGAVSPLAVVNDKECLATLAMDKGLIDADEVLVHPLRNDRSVRVKASDLV 66
            +RF   D+L   L V +GAVSP A+VND        +DK L+DA+ + +HPLRNDR+  +  +DLV
Sbjct:   84 VRFGDEDLLKEKLAVIRGAVSPFALVNDSAAEVKFVIDKALLDAELINIHPLRNDRTTSIPPADLV 149          
BLAST of mRNA_M-pyrifera_M_contig87642.20355.1 vs. uniprot
Match: A0A7X4ERS9_9PROT (Prolyl-tRNA synthetase associated domain-containing protein n=3 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7X4ERS9_9PROT)

HSP 1 Score: 60.1 bits (144), Expect = 1.720e-9
Identity = 29/66 (43.94%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    1 LRFAVPDILDSVLCVAQGAVSPLAVVNDKECLATLAMDKGLIDADEVLVHPLRNDRSVRVKASDLV 66
            + FA  D+++ VL V  GA++PLAV+ND   L T+A++ GL+DAD++  HPL N  S+ ++ ++LV
Sbjct:   92 MGFAPADLVERVLGVMPGALTPLAVLNDDRGLVTVAIEAGLMDADQLNFHPLVNTESIGLEPAELV 157          
BLAST of mRNA_M-pyrifera_M_contig87642.20355.1 vs. uniprot
Match: A0A3D5I4S0_9PROT (Prolyl-tRNA synthetase associated domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D5I4S0_9PROT)

HSP 1 Score: 59.7 bits (143), Expect = 2.600e-9
Identity = 28/65 (43.08%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    3 FAVPDILDSVLCVAQGAVSPLAVVNDKECLATLAMDKGLIDADEVLVHPLRNDRSVRVKASDLVK 67
            F   D L   L V  GAVSPL ++ND +   TL +D+ ++DAD+V +HPL ND++V +  +DL++
Sbjct:  103 FGSADRLMEFLGVRPGAVSPLTLINDPDHQVTLVIDRAILDADKVNLHPLVNDKTVTISTTDLIR 167          
BLAST of mRNA_M-pyrifera_M_contig87642.20355.1 vs. uniprot
Match: K3WC49_GLOUD (Proline--tRNA ligase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WC49_GLOUD)

HSP 1 Score: 60.8 bits (146), Expect = 3.300e-9
Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 0
Query:    1 LRFAVPDILDSVLCVAQGAVSPLAVVNDKECLATLAMDKGLIDADEVLVHPLRNDRSVRVKASDLVK 67
            LRFA  D+L++VL V +G+VSPL V++D++    L +DK L+DA  +  HPLRND +  +    L+K
Sbjct:   86 LRFATEDVLETVLKVKKGSVSPLCVMHDEKTEVRLVLDKALVDAKVLHCHPLRNDLTYSLAPEALLK 152          
BLAST of mRNA_M-pyrifera_M_contig87642.20355.1 vs. uniprot
Match: A0A7S0SYX4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SYX4_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 5.280e-9
Identity = 29/65 (44.62%), Postives = 41/65 (63.08%), Query Frame = 0
Query:    1 LRFAVPDILDSVLCVAQGAVSPLAVVNDKECLATLAMDKGLIDADEVLVHPLRNDRSVRVKASDL 65
            LRF   D+L   L V +GAVSPLA++NDK       +D  L+  D + +HPLRND++  +K +DL
Sbjct:   83 LRFGEEDLLLEKLGVIRGAVSPLALINDKNNEVKFCIDSELLLGDNINIHPLRNDKTTSLKPNDL 147          
BLAST of mRNA_M-pyrifera_M_contig87642.20355.1 vs. uniprot
Match: A0A7Y3W525_9PROT (Prolyl-tRNA synthetase associated domain-containing protein n=1 Tax=Parvularcula mediterranea TaxID=2732508 RepID=A0A7Y3W525_9PROT)

HSP 1 Score: 56.2 bits (134), Expect = 4.000e-8
Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    1 LRFAVPDILDSVLCVAQGAVSPLAVVNDKEC-LATLAMDKGLIDADEVLVHPLRNDRSVRVKASDL 65
            L FA P++++ VL VA G ++P A++ND+   + T  +D+ L +AD +  HPLRN  S  V   DL
Sbjct:   82 LSFAKPEVMEEVLGVAPGHLTPFALINDRSLRIETFVIDEALFEADPIWAHPLRNTASTGVTGEDL 147          
BLAST of mRNA_M-pyrifera_M_contig87642.20355.1 vs. uniprot
Match: A0A418VRZ3_9PROT (Prolyl-tRNA synthetase associated domain-containing protein n=1 Tax=Azospirillum cavernae TaxID=2320860 RepID=A0A418VRZ3_9PROT)

HSP 1 Score: 55.8 bits (133), Expect = 6.700e-8
Identity = 30/65 (46.15%), Postives = 38/65 (58.46%), Query Frame = 0
Query:    1 LRFAVPDILDSVLCVAQGAVSPLAVVNDKECLATLAMDKGLIDADEVLVHPLRNDRSVRVKASDL 65
            L FA  D+L + L V QGAVSP A+VND+E    L +D  L+ A  V  HPL N  +  V+  DL
Sbjct:   89 LSFAKEDLLFATLGVRQGAVSPFALVNDRERRVRLVLDAALMAAPRVAFHPLTNTATTAVRTDDL 153          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87642.20355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNW5_ECTSI3.980e-2174.63Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A5D6Y8W5_9STRA1.450e-1049.25Proline--tRNA ligase n=1 Tax=Pythium brassicum Tax... [more]
A0A7S3ANH3_9EUKA1.450e-1050.00Proline--tRNA ligase n=1 Tax=Haptolina ericina Tax... [more]
A0A7S3H5B0_9STRA3.700e-1045.45Proline--tRNA ligase n=1 Tax=Spumella elongata Tax... [more]
A0A7X4ERS9_9PROT1.720e-943.94Prolyl-tRNA synthetase associated domain-containin... [more]
A0A3D5I4S0_9PROT2.600e-943.08Prolyl-tRNA synthetase associated domain-containin... [more]
K3WC49_GLOUD3.300e-944.78Proline--tRNA ligase n=1 Tax=Globisporangium ultim... [more]
A0A7S0SYX4_9STRA5.280e-944.62Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7Y3W525_9PROT4.000e-840.91Prolyl-tRNA synthetase associated domain-containin... [more]
A0A418VRZ3_9PROT6.700e-846.15Prolyl-tRNA synthetase associated domain-containin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036754YbaK/aminoacyl-tRNA synthetase-associated domain superfamilyGENE3D3.90.960.10coord: 1..67
e-value: 7.4E-14
score: 53.9
IPR036754YbaK/aminoacyl-tRNA synthetase-associated domain superfamilySUPERFAMILY55826YbaK/ProRS associated domaincoord: 1..67
IPR007214YbaK/aminoacyl-tRNA synthetase-associated domainPFAMPF04073tRNA_editcoord: 1..67
e-value: 2.2E-7
score: 31.0
IPR040285Prolyl-tRNA editing protein ProX/PRXD1PANTHERPTHR31423FAMILY NOT NAMEDcoord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87642contigM-pyrifera_M_contig87642:385..585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87642.20355.1mRNA_M-pyrifera_M_contig87642.20355.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig87642 385..585 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig87642.20355.1 ID=prot_M-pyrifera_M_contig87642.20355.1|Name=mRNA_M-pyrifera_M_contig87642.20355.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=67bp
LRFAVPDILDSVLCVAQGAVSPLAVVNDKECLATLAMDKGLIDADEVLVH
PLRNDRSVRVKASDLVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036754YbaK/aa-tRNA-synt-asso_dom_sf
IPR007214YbaK/aa-tRNA-synth-assoc-dom
IPR040285ProX/PRXD1