prot_M-pyrifera_M_contig8764.20354.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8764.20354.1
Unique Nameprot_M-pyrifera_M_contig8764.20354.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length599
Homology
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BLAST of mRNA_M-pyrifera_M_contig8764.20354.1 vs. uniprot
Match: D7FJW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW9_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 2.430e-36
Identity = 75/133 (56.39%), Postives = 85/133 (63.91%), Query Frame = 0 
Query:    1 MCLAVGQAILACLKCGWDPVRGTNILEPALCNDQAEGDGRVRSYADAWGVNPDNLEDLLKFSWQLMKPLA-------------RDEGVGLAGGVADDDWDHLRATWRKIERMWRSAADLDDGDDASSVEGGDG 120
            MCLAV QAILACLKCGWDP RGTN+  PALCN+Q EGD R+  YA AWGV+PD LE+LLK+SW LMKP A             R+E           +WDHLRATWRK+E MWR A      D+ S   GGDG
Sbjct:  182 MCLAVAQAILACLKCGWDPARGTNLFRPALCNEQREGDARLGKYATAWGVDPDRLEELLKYSWALMKPNAQKSKKADGDQAGSREEXXXXXXXXXXXEWDHLRATWRKLENMWRGAKSAAH-DEGSVSRGGDG 313
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BLAST of mRNA_M-pyrifera_M_contig8764.20354.1 vs. uniprot
Match: A0A6H5JPR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPR6_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 7.210e-35
Identity = 73/116 (62.93%), Postives = 82/116 (70.69%), Query Frame = 0 
Query:    1 MCLAVGQAILACLKCGWDPVRGTNILEPALCNDQAEGDGRVRSYADAWGVNPDNLEDLLKFSWQLMKPLA-------------RDEGVGLAGGVADDDWDHLRATWRKIERMWRSA 103
            MCLAV QAILACLKCGWDP RGTN+L PALCNDQ EGD R+  YA AWGV+PD LE+LLK+SW LMKP A             R+E V    G  + +WDHLRATWRK+E MWR A
Sbjct:  342 MCLAVAQAILACLKCGWDPARGTNLLRPALCNDQREGDARLGKYAAAWGVDPDRLEELLKYSWALMKPNAQKSKRADGDQAGSREEEVEEEEG--EGEWDHLRATWRKLENMWRGA 455
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8764.20354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJW9_ECTSI2.430e-3656.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPR6_9PHAE7.210e-3562.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..598
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8764contigM-pyrifera_M_contig8764:5162..8501 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8764.20354.1mRNA_M-pyrifera_M_contig8764.20354.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8764 4018..10612 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8764.20354.1 ID=prot_M-pyrifera_M_contig8764.20354.1|Name=mRNA_M-pyrifera_M_contig8764.20354.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=599bp
MCLAVGQAILACLKCGWDPVRGTNILEPALCNDQAEGDGRVRSYADAWGV
NPDNLEDLLKFSWQLMKPLARDEGVGLAGGVADDDWDHLRATWRKIERMW
RSAADLDDGDDASSVEGGDGGVNGDGNGGGFTGGDNGGGNDAVSGGVITG
DVSDGINGGASDGVTGGVSGDENGGSSDRTAVDAGVDGSDSNSGAAAAAI
PAPATTTTTTTTTAAAIPTPATVAAPPAAARPPPPAPATAAAPAPTTAVP
AVAAIREASSAAVAATPVTAVAAPVAEVPAATASAAATPAAAIATPAADM
PSATKAVAESTVATMPTATAPVPALVAAVPAAATGVPAAVIPAATAAAMP
AAAVPVPAAVAAAVTAVTTAAPATAIPEAAAPAAAASAPAVPAAACATTE
NAGAKTGPTENGTPLPSPAADVAGSKTAQVSAAVETTSPTVPTSPANSSL
SKNCEVVAAPHTAAIAAHEAAAARAAAAGAAEAAAAATEPGAGAGTAETT
AAAATTAAEAAAATEAAAGAGTAETTAAAATTAGEATAAATEASAGAGAA
ETTAAEATTAREAADAADWEIRRGGPPRRGFLRCSAGGRRCRCHTRVG*
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