prot_M-pyrifera_M_contig109765.2034.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig109765.2034.1
Unique Name	prot_M-pyrifera_M_contig109765.2034.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	109

Homology

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BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: A0A484DW69_BRELC (U1-type domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DW69_BRELC)

HSP 1 Score: 142 bits (358), Expect = 3.860e-38
Identity = 66/100 (66.00%), Postives = 87/100 (87.00%), Query Frame = 0

Query:    1 MGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 100
            +GT  AV+ALKAAEA+ARDV A D+NMGCPK FS++GGMGAALL KPEVA DI++TLRRN+++P+SCK+R + +++ TV+L RR+E AGAHAIGVH+R +
Sbjct:   84 IGTADAVLALKAAEAVARDVSAIDINMGCPKHFSIQGGMGAALLQKPEVACDIMKTLRRNLNIPLSCKIRLLPEIQDTVDLARRLEDAGAHAIGVHMRQI 183

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BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: W2G1E1_PHYPR (U1-type domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2G1E1_PHYPR)

HSP 1 Score: 138 bits (347), Expect = 1.740e-36
Identity = 64/100 (64.00%), Postives = 87/100 (87.00%), Query Frame = 0

Query:    1 MGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 100
            +GT  AV+ALKAAEA+ARDV A D+NMGCPK FSV+GGMGAALL KPEVA DI++TLRRN+++P+SCK+R + +++ TV+L +R+E AGA+A+GVH+R +
Sbjct:   84 IGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIMKTLRRNLNIPVSCKIRLLPEIQDTVDLAKRLEDAGAYAVGVHMRQI 183

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BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: H3GYM5_PHYRM (U1-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYM5_PHYRM)

HSP 1 Score: 138 bits (347), Expect = 2.260e-36
Identity = 64/100 (64.00%), Postives = 86/100 (86.00%), Query Frame = 0

Query:    1 MGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 100
            +GT  AV+ALKAAEA+ARDV A D+NMGCPK FSV+GGMGAALL KPEVA DII+TLRRN+++P+SCK+R + +++ T++  RR+E AGA+A+GVH+R +
Sbjct:   84 IGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIIKTLRRNLNIPVSCKIRLLPEIQDTIDTARRLEDAGAYAVGVHMRQI 183

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BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: A0A6A3TA19_9STRA (U1-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TA19_9STRA)

HSP 1 Score: 137 bits (345), Expect = 4.430e-36
Identity = 63/100 (63.00%), Postives = 86/100 (86.00%), Query Frame = 0

Query:    1 MGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 100
            +GT  AV+ALKAAEA+ARDV A D+NMGCPK FS++GGMGAALL KPEVA DII+TLRRN+S+P+SCK+R + +++ T++  +R+E AGA+A+GVH+R +
Sbjct:   84 IGTADAVLALKAAEAVARDVAAVDINMGCPKHFSIQGGMGAALLRKPEVACDIIKTLRRNLSIPVSCKIRFLPEIQDTIDTAKRLEDAGAYAVGVHMRQI 183

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BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: D0P0N4_PHYIT (tRNA-dihydrouridine synthase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0P0N4_PHYIT)

HSP 1 Score: 137 bits (344), Expect = 4.590e-36
Identity = 65/98 (66.33%), Postives = 85/98 (86.73%), Query Frame = 0

Query:    1 MGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLR 98
            +GT  AV+ALKAAEA+ARDV A D+NMGCPK FSV+GGMGAALL KPEVA DI++TLRRN+++P+SCK+R + +++ TV+L RR+E AGA A+GVH+R
Sbjct:   84 IGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIMKTLRRNLNIPVSCKIRLLPEIQDTVDLARRLEDAGACAVGVHMR 181

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BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: A0A225WUV3_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WUV3_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.020e-35
Identity = 63/100 (63.00%), Postives = 86/100 (86.00%), Query Frame = 0

Query:    1 MGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 100
            +GT  AV+ALKAAEA+ARDV A D+NMGCPK FSV+GGMGAALL KPEVA DI++TLRRN+++P+SCK+R + +++ TV+  +R+E AGA+A+GVH+R +
Sbjct:   84 IGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIMKTLRRNLNIPVSCKIRLLPEIQDTVDAAKRLENAGAYAVGVHMRQI 183

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BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: A0A2P4WWN1_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWN1_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.090e-35
Identity = 63/100 (63.00%), Postives = 86/100 (86.00%), Query Frame = 0

Query:    1 MGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 100
            +GT  AV+ALKAAEA+ARDV A D+NMGCPK FSV+GGMGAALL KPEVA DI++TLRRN+++P+SCK+R + +++ TV+  +R+E AGA+A+GVH+R +
Sbjct:   84 IGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIMKTLRRNLNIPVSCKIRLLPEIQDTVDTAKRLEDAGAYAVGVHMRQI 183

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BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: G5AD05_PHYSP (U1-type domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AD05_PHYSP)

HSP 1 Score: 135 bits (341), Expect = 1.680e-35
Identity = 64/100 (64.00%), Postives = 85/100 (85.00%), Query Frame = 0

Query:    1 MGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 100
            +GT  AV+ALKAAEA+ARDV A D+NMGCPK FSV+GGMGAALL KPEVA DII+TLRRN+++P+SCK+R + +++ T++  +R+E AGA A+GVHLR +
Sbjct:   84 IGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIIKTLRRNLNIPVSCKIRLLPEIQDTIDTAKRLEDAGACAVGVHLRQI 183

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BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: A0A3R7JYU6_9STRA (U1-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JYU6_9STRA)

HSP 1 Score: 134 bits (337), Expect = 6.440e-35
Identity = 62/100 (62.00%), Postives = 84/100 (84.00%), Query Frame = 0

Query:    1 MGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 100
            +GT  AV+ALKAAE +ARDV A D+NMGCPK FSV+GGMGAALL KPEVA DII+TLRRN+++P+SCK+R + + + T++  RR++ AGA+A+GVH+R +
Sbjct:   84 IGTADAVLALKAAEQVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIIKTLRRNLNIPVSCKIRLLSETQDTIDTARRLQDAGAYAVGVHMRQI 183

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BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Match: A0A3M6V884_9STRA (U1-type domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V884_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.860e-34
Identity = 64/108 (59.26%), Postives = 86/108 (79.63%), Query Frame = 0

Query:    1 MGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVAAD--------IIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV 100
            +GT  AV+ALKAAEA+ARDV A D+NMGCPK FSV+GGMGAALL KPE+A D        II+TLRRN+++P+SCK+R + ++K T++  +R+E AGAHA+GVH+R +
Sbjct:   84 IGTADAVLALKAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEIACDRLLSMAVKIIKTLRRNLTIPVSCKIRLLPNMKDTIDTAKRLEDAGAHAVGVHMRQI 191

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig109765.2034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A484DW69_BRELC	3.860e-38	66.00	U1-type domain-containing protein n=1 Tax=Bremia l...	[more]
W2G1E1_PHYPR	1.740e-36	64.00	U1-type domain-containing protein n=12 Tax=Phytoph...	[more]
H3GYM5_PHYRM	2.260e-36	64.00	U1-type domain-containing protein n=1 Tax=Phytopht...	[more]
A0A6A3TA19_9STRA	4.430e-36	63.00	U1-type domain-containing protein n=2 Tax=Phytopht...	[more]
D0P0N4_PHYIT	4.590e-36	66.33	tRNA-dihydrouridine synthase, putative n=2 Tax=Phy...	[more]
A0A225WUV3_9STRA	1.020e-35	63.00	tRNA-dihydrouridine synthase n=1 Tax=Phytophthora ...	[more]
A0A2P4WWN1_9STRA	1.090e-35	63.00	tRNA-dihydrouridine synthase n=1 Tax=Phytophthora ...	[more]
G5AD05_PHYSP	1.680e-35	64.00	U1-type domain-containing protein n=1 Tax=Phytopht...	[more]
A0A3R7JYU6_9STRA	6.440e-35	62.00	U1-type domain-containing protein n=3 Tax=Phytopht...	[more]
A0A3M6V884_9STRA	1.860e-34	59.26	U1-type domain-containing protein n=2 Tax=Peronosp...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70		coord: 1..103 e-value: 3.0E-29 score: 103.8
IPR001269	tRNA-dihydrouridine synthase	PFAM	PF01207	Dus	coord: 9..98 e-value: 3.6E-23 score: 82.2
None	No IPR available	PANTHER	PTHR45936	FAMILY NOT NAMED	coord: 1..98
None	No IPR available	SUPERFAMILY	51395	FMN-linked oxidoreductases	coord: 7..104

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig109765	contig	M-pyrifera_M_contig109765:8..399 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig109765.2034.1	mRNA_M-pyrifera_M_contig109765.2034.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig109765 8..603 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig109765.2034.1 ID=prot_M-pyrifera_M_contig109765.2034.1|Name=mRNA_M-pyrifera_M_contig109765.2034.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp
MGTPTAVVALKAAEAIARDVDAFDLNMGCPKSFSVKGGMGAALLAKPEVA
ADIIRTLRRNVSLPISCKVRCVHDLKSTVELMRRMEAAGAHAIGVHLRWV
VGPPGGCV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013785	Aldolase_TIM
IPR001269	tRNA_hU_synthase