mRNA_M-pyrifera_M_contig87588.20344.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A5J4XRF7_9CHLO (tRNA dihydrouridine synthase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XRF7_9CHLO) HSP 1 Score: 130 bits (327), Expect = 1.900e-33 Identity = 64/119 (53.78%), Postives = 83/119 (69.75%), Query Frame = 1 Query: 1 VAPMMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAMMD 357 VAPMM+ T + FR+LCR++S+ T LYTEMVV TL +P+ R L P QHP+ QLGG++P L A + GYDEINLNCGCPS +VAG G FGAA+ML+P+ A+C +AM + Sbjct: 64 VAPMMDWTDLHFRQLCRLISKQTWLYTEMVVDQTLLHNPDTD-RFLWFPPEQHPIVCQLGGSNPKTLAAAAKVVAKYGYDEINLNCGCPSERVAGAGCFGAAMMLQPQLVAQCCQAMQE 181
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A1D1ZTT2_AUXPR (Dus domain-containing protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZTT2_AUXPR) HSP 1 Score: 129 bits (325), Expect = 7.730e-33 Identity = 67/117 (57.26%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 1 VAPMMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAM 351 VAPMM+ T + +R+L R++SRHT LYTEMVV TL +P+ R L P QHP+ QLGG+DP +L A R GYDEINLN GCPS +VAG G FGAALMLRP+ ARC A+ Sbjct: 70 VAPMMDWTDLHYRQLARMISRHTWLYTEMVVDKTLIHNPDHD-RFLWFPPEQHPIVCQLGGSDPDELAAAARIVAGYGYDEINLNVGCPSDRVAGAGCFGAALMLRPELVARCCAAI 185
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A383V9N4_TETOB (Dus domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V9N4_TETOB) HSP 1 Score: 129 bits (324), Expect = 8.030e-33 Identity = 65/119 (54.62%), Postives = 81/119 (68.07%), Query Frame = 1 Query: 1 VAPMMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAMMD 357 +APMME T V +R+L R+LS+HT L+TEMVV T+ H + L P QHP+ LQLGG+DP L A + A GYDEINLNCGCPS +VAG G FGAALML+P+ A C+ A+ Sbjct: 32 IAPMMEWTDVHYRQLARLLSKHTWLWTEMVVDKTI-IHTPLLDKHLWFPPEQHPIVLQLGGSDPALLLQAAKVAATYGYDEINLNCGCPSDRVAGAGCFGAALMLQPELVADCMAAIQQ 149
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: C1FGA1_MICCC (Dus domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FGA1_MICCC) HSP 1 Score: 127 bits (318), Expect = 1.310e-32 Identity = 71/121 (58.68%), Postives = 79/121 (65.29%), Query Frame = 1 Query: 1 VAPMMECTTVPFRELCRILSRHTKLYTEMVVCSTLWF--HPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAMMD 357 VAPMM+ TT FR LCR+LSRHT LYTEM V TL HP R L P + HP LQLGG+DP + A A GYDEINLNCGCPS KVAGKGAFGAALML P+ + AM + Sbjct: 9 VAPMMDYTTAHFRHLCRLLSRHTWLYTEMEVDQTLVHTDHPR-LDRYLDFPTATHPSVLQLGGSDPETMARATAVAAPYGYDEINLNCGCPSPKVAGKGAFGAALMLEPELVRDVVAAMRE 128
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A061R677_9CHLO (tRNA-dihydrouridine synthase A n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R677_9CHLO) HSP 1 Score: 127 bits (319), Expect = 2.220e-32 Identity = 66/117 (56.41%), Postives = 80/117 (68.38%), Query Frame = 1 Query: 1 VAPMMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAM 351 VAPMM+ T V +R+L R+L++HT L+TEMVV STL R L PK Q P+ LQLGG++P +L A AL GYDEINLNCGCPS +VAG G FGA+LML P+ A C AM Sbjct: 68 VAPMMDWTDVYWRQLARMLTKHTWLWTEMVVDSTLIHQHPNNDRFLWFPKEQRPLVLQLGGSEPEKLARAAELALPYGYDEINLNCGCPSDRVAGAGCFGASLMLEPERVAACCAAM 184
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A250XK34_9CHLO (Dus domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XK34_9CHLO) HSP 1 Score: 128 bits (322), Expect = 2.630e-32 Identity = 64/119 (53.78%), Postives = 82/119 (68.91%), Query Frame = 1 Query: 1 VAPMMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAMMD 357 VAPMM+CT + +R+L RI+S+ T L+TEMVV T+ H + L P QHP+ QLGG+DP L AV+ + GYDEINLNCGCPS +VAG G FGA+LML+P A C++AM D Sbjct: 12 VAPMMDCTDLHYRQLARIISKRTWLWTEMVVDKTI-LHTPFLDKFLWFPPEQHPIVCQLGGSDPATLAAAVKKVVEYGYDEINLNCGCPSDRVAGAGCFGASLMLQPDLVASCMKAMAD 129
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A7S1T2X4_9CHLO (Hypothetical protein n=2 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T2X4_9CHLO) HSP 1 Score: 127 bits (319), Expect = 3.450e-32 Identity = 65/117 (55.56%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 1 VAPMMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAM 351 VAPMM+ T + +R+L R+LS+HT L+TEMVV TL + L P+ QHP+ LQLGG+DP L A AL GYDEINLNCGCPS +VAG G FGAALML P+ C AM Sbjct: 101 VAPMMDWTDLHWRQLARMLSKHTWLWTEMVVDLTLVHQDPNLDKFLWFPEEQHPIVLQLGGSDPETLAKAAELALPYGYDEINLNCGCPSDRVAGSGCFGAALMLDPQRVGACCAAM 217
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A7S3R3J5_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3R3J5_DUNTE) HSP 1 Score: 127 bits (318), Expect = 1.010e-31 Identity = 65/119 (54.62%), Postives = 81/119 (68.07%), Query Frame = 1 Query: 1 VAPMMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAMMD 357 VAPMM+ T V +R+L R++SRHT L+TEMVV T+ P R L PK Q P+ LQ+GG++P L A R A+ GYDEINLNCGCPS +VAG G FGA+LML P+ C+ AM D Sbjct: 53 VAPMMDWTDVHYRQLARLISRHTWLWTEMVVDKTILNSPHPD-RFLWFPKEQRPLVLQVGGSEPESLAAAARVAIEYGYDEINLNCGCPSDRVAGAGCFGASLMLEPELVGDCMRAMGD 170
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A2Z7BEP8_9LAMI (tRNA-dihydrouridine synthase n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BEP8_9LAMI) HSP 1 Score: 124 bits (310), Expect = 1.230e-31 Identity = 62/117 (52.99%), Postives = 74/117 (63.25%), Query Frame = 1 Query: 1 VAPMMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAM 351 VAPMMECT +R L R LS+H LYTEM+ T+ F + + L QHP+ALQ+GGND L A + A GYDEINLNCGCPSS+VAGKG FG LML PK A + + Sbjct: 13 VAPMMECTNNYYRTLARFLSKHAWLYTEMIAAETIVFQKGDLDKFLGFGPEQHPIALQIGGNDLDNLAKATQLANSYGYDEINLNCGCPSSRVAGKGCFGVRLMLDPKFVANAMSVI 129
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Match: A0A8J9SR70_9CHLO (tRNA-dihydrouridine(20/20a) synthase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SR70_9CHLO) HSP 1 Score: 125 bits (313), Expect = 1.880e-31 Identity = 62/117 (52.99%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 1 VAPMMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHPVALQLGGNDPTQLRLAVRFALLAGYDEINLNCGCPSSKVAGKGAFGAALMLRPKHTARCLEAM 351 VAPMM+ T V +R++ R++S+HT LYTEMVV T+ H R L P Q P+ QLGG+DP +L A + GYDEINLNCGCPS +VAG G FGA+LML+P A C AM Sbjct: 15 VAPMMDWTDVHYRQMARLISKHTWLYTEMVVDQTI-IHNPNTDRFLWFPPEQRPIVCQLGGSDPAKLAAAAKIVARYGYDEINLNCGCPSDRVAGAGCFGASLMLQPDTVAECCSAM 130 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87588.20344.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig87588.20344.1 >prot_M-pyrifera_M_contig87588.20344.1 ID=prot_M-pyrifera_M_contig87588.20344.1|Name=mRNA_M-pyrifera_M_contig87588.20344.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp MMECTTVPFRELCRILSRHTKLYTEMVVCSTLWFHPEEAFRRLVVPKSQHback to top mRNA from alignment at M-pyrifera_M_contig87588:445..801- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig87588.20344.1 ID=mRNA_M-pyrifera_M_contig87588.20344.1|Name=mRNA_M-pyrifera_M_contig87588.20344.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=357bp|location=Sequence derived from alignment at M-pyrifera_M_contig87588:445..801- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig87588:445..801- >mRNA_M-pyrifera_M_contig87588.20344.1 ID=mRNA_M-pyrifera_M_contig87588.20344.1|Name=mRNA_M-pyrifera_M_contig87588.20344.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig87588:445..801- (Macrocystis pyrifera P11B4 male)back to top |