mRNA_M-pyrifera_M_contig87567.20337.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig87567.20337.1
Unique NamemRNA_M-pyrifera_M_contig87567.20337.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig87567.20337.1 vs. uniprot
Match: A0A2D8CFF5_9BACT (Uncharacterized protein n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CFF5_9BACT)

HSP 1 Score: 311 bits (798), Expect = 1.250e-97
Identity = 152/273 (55.68%), Postives = 204/273 (74.73%), Query Frame = 1
Query:    7 LVSTSTSIFPQTDPFNNVRGYYLFEDGEWFNYNIRTSPEMNSNNFWTVFSQTSTSSDYYFGSWGKGVLRHNINTKDISIFNASNSGLTGITNDRSFLVIPGLDDDSNGDVWITSFDSDKPLNLQQNGSDEWKHFSKVAIPTDNLYFNLFIDSNDKKWISLIDFSNNGKGLLVLDTGNPLDETDDLYRKLTADGNNGNLPDEKITSIAEDNNGEVWIGTSRGIARFIFPDFIVESNNPNDYEAQWLINEDTAAISRFLLRDVNVSTIAVNEANQ 825
            L+ TST  FP+ DPFN +RGYY++ED +W NYN  TS +++   + T FS   T S YYFGSWG+G+ RHN N+ +IS+F+  NS L GI     F+VI GLD+D+ G++W  SF SD PLN+Q NGSD+W  +   A    +LYF++FIDS ++KWISLI+ SN G+GL +LDTG+P D  DD   KLT+D  NGNLPDEK+ +I +D NGE+WIGT+RGIARFIFP+ ++E   P++ +AQWLINEDT+A+SRFLLRD++V+++AVN ANQ
Sbjct:  344 LIGTSTLAFPRIDPFNLIRGYYIYEDDQWKNYNRNTSTDLSE--YSTAFSIGKTDSSYYFGSWGQGIARHNRNSNEISVFDRQNSNLLGIGQSPDFVVISGLDNDTQGNMWAVSFLSDFPLNVQLNGSDDWLPYRSDA--GSDLYFDIFIDSFNQKWISLINSSNVGQGLFILDTGDPEDANDDESVKLTSDAGNGNLPDEKVNAIVQDKNGEIWIGTNRGIARFIFPELVIEGG-PDERQAQWLINEDTSAVSRFLLRDISVTSMAVNGANQ 611          
BLAST of mRNA_M-pyrifera_M_contig87567.20337.1 vs. uniprot
Match: A0A521EGS4_9BACT (Two component regulator propeller n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521EGS4_9BACT)

HSP 1 Score: 287 bits (735), Expect = 2.750e-88
Identity = 144/274 (52.55%), Postives = 190/274 (69.34%), Query Frame = 1
Query:    4 TLVSTSTSIFPQTDPFNNVRGYYLFEDGEWFNYNIRTSPEMNSNNFWTVFSQTSTSSDYYFGSWGKGVLRHNINTKDISIFNASNSGLTGITNDRSFLVIPGLDDDSNGDVWITSFDSDKPLNLQQNGSDEWKHFSKVAIPTDNLYFNLFIDSNDKKWISLIDFSNNGKGLLVLDTGNPLDETDDLYRKLTADGNNGNLPDEKITSIAEDNNGEVWIGTSRGIARFIFPDFIVESNNPNDYEAQWLINEDTAAISRFLLRDVNVSTIAVNEANQ 825
            TL++TS+S FPQTDP N VRGYY+FED  W N+N  T+  +  N     F+   + S YY G+WG G++ H  +T DI+++N +NS L+GI  D  ++V+PG+D DS+G+VW TSF S+ PLN++  GSDEW  F        + YFN+ +DS D+KWISL    N G GLLV+DTG+P    DD   KLT+  NNG LPDEK+  I ED  G++WIGT RGIA+F+FP+  +E  +P+  EAQWLINEDT A SR+LLRDVNV+ IAVN+ANQ
Sbjct:  346 TLLATSSSAFPQTDPLNPVRGYYIFEDDVWHNFNRNTNEVLRDNQVSNAFAVGQSDSAYYIGTWGGGIVEHQKSTNDITVYNENNSALSGIGIDPDYIVVPGIDIDSDGNVWATSFWSEFPLNVKLEGSDEWIPFRSHT--GGDHYFNMLVDSYDQKWISLRSEGNAGLGLLVVDTGDPETAQDDQSVKLTSASNNGRLPDEKVNVIVEDRGGDIWIGTGRGIAKFVFPEKFIE-RSPSQREAQWLINEDTLASSRYLLRDVNVTAIAVNDANQ 616          
BLAST of mRNA_M-pyrifera_M_contig87567.20337.1 vs. uniprot
Match: A0A6A8QBY6_9BACT (Uncharacterized protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8QBY6_9BACT)

HSP 1 Score: 266 bits (680), Expect = 3.330e-80
Identity = 134/275 (48.73%), Postives = 187/275 (68.00%), Query Frame = 1
Query:    7 LVSTSTSIFPQTDPFNNVRGYYLFEDGEWFNYNIRTSPEMNSNNFWTVFSQTSTSSDYYFGSWGKGVLRHNINTKDISIFNASNSGLTGITNDRSFLVIPGLDDDSNGDVWITSFDSDKPLNLQQNGSDEWKHFSKVAIPTDNLYFNLFIDSNDKKWISLIDFSN--NGKGLLVLDTGNPLDETDDLYRKLTADGNNGNLPDEKITSIAEDNNGEVWIGTSRGIARFIFPDFIVESNNPNDYEAQWLINEDTAAISRFLLRDVNVSTIAVNEANQ 825
            L++ ST  FPQ +PFN ++G+Y++E GEW N+NI T+  + +  F    +   T S YY GSWG GVL+ N NT  + +F+ SNS L G  + + ++V  GL +DS+ ++W+ S DS+ PLN+ ++GSDEW  F +  +     YF LF+DS D+KW++LID  N  NG+GL V++T +  D  DD    L    +NGNLPD ++ +I +D NGEVWIGTSRGIARFIFP+ +++   PN+  AQWLINEDT A SR+LLRD+NVS +AVN ANQ
Sbjct:  346 LIAASTHTFPQKNPFNPIKGHYVYEGGEWKNFNINTNETIRAVGFSGAHTVARTDSFYYIGSWGGGVLKQNRNTGTLKVFDTSNSNLKGWKDSKDYVVASGLAEDSHNNMWMISSDSNYPLNVNRSGSDEWLTF-EGDVSGGRTYFKLFVDSFDQKWVTLIDNLNTGNGRGLAVINTNDIEDPEDDTIVTLIDSPDNGNLPDNEVNAIIQDTNGEVWIGTSRGIARFIFPELVIDGG-PNERRAQWLINEDTTASSRYLLRDINVSAMAVNGANQ 618          
BLAST of mRNA_M-pyrifera_M_contig87567.20337.1 vs. uniprot
Match: A0A1B6Y6D1_9BACT (Uncharacterized protein n=1 Tax=Balneola sp. EhC07 TaxID=1849360 RepID=A0A1B6Y6D1_9BACT)

HSP 1 Score: 260 bits (665), Expect = 4.990e-78
Identity = 136/275 (49.45%), Postives = 186/275 (67.64%), Query Frame = 1
Query:    7 LVSTSTSIFPQTDPFNNVRGYYLFEDGEWFNYNIRTSPEMNSNNFWTVFSQTSTSSDYYFGSWGKGVLRHNINTKDISIFNASNSGLTGITNDRS-FLVIPGLDDDSNGDVWITSFDSDKPLNLQQNGSDEWKHFSKV-AIPTDNLYFNLFIDSNDKKWISLIDFSNNGKGLLVLDTGNPLDETDDLYRKLTADGNNGNLPDEKITSIAEDNNGEVWIGTSRGIARFIFPDFIVESNNPNDYEAQWLINEDTAAISRFLLRDVNVSTIAVNEANQ 825
            L+S ST    + +  +  RG+Y++E+G W NYN   +PE +   F   F  T++ + YYFGSWG G++R + NT +I +F+ +NS L G   D   + VI GL+ DSN DVW+ S   D PL  Q  G D+W+ F +  A  + +LY NLFIDS D+KWI + +  ++G GLLV+DT NP DETDD+  KL   GN+GNLPD K+  I EDNNGEVWIGT+RGIA+FIFP+ ++E +   +  AQWLINEDT+A+SRFLLRD+N + +AVN AN+
Sbjct:  343 LISGSTRSSSRREEIDKSRGFYIYENGVWENYNEILTPEFDGVVFRQPFKTTASGNYYYFGSWGTGIVRFDKNTDEIRLFDETNSTLRGWPQDSELYPVISGLETDSNNDVWLVSRYGDTPLYRQTPGDDDWQSFEENNAAASSDLYENLFIDSFDQKWIPIQNAQSSGTGLLVIDTKNPEDETDDVGIKLQTGGNSGNLPDSKVNVIIEDNNGEVWIGTARGIAKFIFPEILIEGS-VQERTAQWLINEDTSAVSRFLLRDINATAMAVNAANE 616          
BLAST of mRNA_M-pyrifera_M_contig87567.20337.1 vs. uniprot
Match: A0A3F3HZD0_9BACT (Uncharacterized protein n=5 Tax=Balneola sp. TaxID=2024824 RepID=A0A3F3HZD0_9BACT)

HSP 1 Score: 259 bits (662), Expect = 1.320e-77
Identity = 136/275 (49.45%), Postives = 183/275 (66.55%), Query Frame = 1
Query:    7 LVSTSTSIFPQTDPFNNVRGYYLFEDGEWFNYNIRTSPEMNSNNFWTVFSQTSTSSDYYFGSWGKGVLRHNINTKDISIFNASNSGLTGI-TNDRSFLVIPGLDDDSNGDVWITSFDSDKPLNLQQNGSDEWKHFSK-VAIPTDNLYFNLFIDSNDKKWISLIDFSNNGKGLLVLDTGNPLDETDDLYRKLTADGNNGNLPDEKITSIAEDNNGEVWIGTSRGIARFIFPDFIVESNNPNDYEAQWLINEDTAAISRFLLRDVNVSTIAVNEANQ 825
            L+++ST+ F      +  +G+Y+ ED  W NYN   + E+    F   F+ T T   YYFGSWG+GV R N  TK+I +F+ +NS L G   +D +F VI GLD D+N DVW+ S     PL  Q  G D+W+ F +  ++ + +LY NLFIDS + KWI L +  ++G GLLVLDT +P +  DD+  KL    +NGNLPD K+ ++ ED NGEVWIGTSRGIA+FIFP+ IVE +   +  AQWLINEDT+A+SRFLLRD+NVST+AVN AN+
Sbjct:  341 LIASSTNKFSGNGNIDQSKGFYVLEDDVWINYNSLLNSELKELGFQQAFTSTVTDQYYYFGSWGRGVSRLNKETKEIKVFDETNSSLRGWPADDPNFPVITGLDTDTNDDVWLVSRYGGSPLYRQTPGEDDWQSFEENSSVSSSDLYENLFIDSYNHKWIPLQNAQSSGTGLLVLDTNDPENSNDDVGVKLQIGASNGNLPDNKVNALIEDKNGEVWIGTSRGIAKFIFPELIVEGST-QERTAQWLINEDTSAVSRFLLRDINVSTMAVNAANE 614          
BLAST of mRNA_M-pyrifera_M_contig87567.20337.1 vs. uniprot
Match: A0A3M8FQ33_9BACT (Uncharacterized protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8FQ33_9BACT)

HSP 1 Score: 258 bits (659), Expect = 3.810e-77
Identity = 131/275 (47.64%), Postives = 187/275 (68.00%), Query Frame = 1
Query:    7 LVSTSTSIFPQTDPFNNVRGYYLFEDGEWFNYNIRTSPEMNSNNFWTVFSQTSTSSDYYFGSWGKGVLRHNINTKDISIFNASNSGLTGITNDRS-FLVIPGLDDDSNGDVWITSFDSDKPLNLQQNGSDEWKHFSKVA-IPTDNLYFNLFIDSNDKKWISLIDFSNNGKGLLVLDTGNPLDETDDLYRKLTADGNNGNLPDEKITSIAEDNNGEVWIGTSRGIARFIFPDFIVESNNPNDYEAQWLINEDTAAISRFLLRDVNVSTIAVNEANQ 825
            L++ ST+   +    +N +GYY+FE+ EW N N + +  + +  +   F+ T T   YYFG+WG+GV RH  N+ ++ +F+ +NS + G  +D   F VI GL  D+N DVW+ S     PL  Q  G D+W  F KV+ + + + Y  LFIDS ++KWI+L + + +G GLLV+DTGNP D +DD+  KL +  ++GNLPDE++ +I +D N EVWIGT RGIARFIFP FI +++NP++  AQWLINEDT+A+SRFLLRDVNVS +AVN AN+
Sbjct:  343 LIAASTNESARNSAIDNGKGYYIFENNEWVNVNSQNNTSLGALGYKQAFTSTITDEYYYFGAWGRGVARHAKNSGEVRVFDETNSTIRGWEDDDPLFPVISGLATDTNDDVWLVSRYGTNPLYYQSPGDDDWVAFPKVSGLNSQDEYVGLFIDSFNQKWITLQNSTVDGTGLLVIDTGNPSDASDDIGVKLISGESSGNLPDEQVNAIIQDKNEEVWIGTGRGIARFIFPQFITQTSNPSERNAQWLINEDTSAVSRFLLRDVNVSAMAVNGANE 617          
BLAST of mRNA_M-pyrifera_M_contig87567.20337.1 vs. uniprot
Match: UPI0013000835 (hypothetical protein n=1 Tax=Gracilimonas amylolytica TaxID=1749045 RepID=UPI0013000835)

HSP 1 Score: 258 bits (658), Expect = 4.100e-77
Identity = 134/273 (49.08%), Postives = 187/273 (68.50%), Query Frame = 1
Query:    7 LVSTSTSIFPQTDPFNNVRGYYLFEDGEWFNYNIRTSPEMNSNNFWTVFSQTSTSSDYYFGSWGKGVLRHNINTKDISIFNASNSGLTGITNDRSFLVIPGLDDDSNGDVWITSFDSDKPLNLQQNGSDEWKHFSKVAIPTDNLYFNLFIDSNDKKWISLIDFSNNGKGLLVLDTGNPLDETDDLYRKLTADGNNGNLPDEKITSIAEDNNGEVWIGTSRGIARFIFPDFIVESNNPNDYEAQWLINEDTAAISRFLLRDVNVSTIAVNEANQ 825
            LV T+TS FP  DPFN  RGY +     W NYN     E+      T++S   TS++ + GSWG GV++ +   ++++++N +NS L GI ++  F+VI GLD+DS  ++W  S+ S+KPLN+ ++ + EW  F  ++  +DN Y+NLFIDSND+KWISLI  +N G GLL++DT +  D  DD + KLT + + GNLP  K+ +I ED NGEVWIGT RG+ARFIFP+F++     N+ +AQWLINEDT A SRFLLRD+NV+ +AVN ANQ
Sbjct:  335 LVGTNTSEFPGFDPFNPYRGYSILNGNRWKNYNRLFQNELEFVE--TIYSLGQTSNNIFLGSWGDGVVQQSKANEELAVYNNTNSNLRGINSNEDFVVISGLDNDSYDNLWAVSYLSEKPLNVFKSDNQEWITFDNLS-GSDN-YYNLFIDSNDQKWISLITDANTGLGLLIVDTKDVEDPNDDEFIKLTENPDRGNLPHPKVNAIIEDRNGEVWIGTERGLARFIFPEFMINGTG-NERQAQWLINEDTTAASRFLLRDLNVTALAVNSANQ 602          
BLAST of mRNA_M-pyrifera_M_contig87567.20337.1 vs. uniprot
Match: A0A2D9FQM0_9BACT (Uncharacterized protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2D9FQM0_9BACT)

HSP 1 Score: 252 bits (643), Expect = 8.550e-75
Identity = 136/278 (48.92%), Postives = 175/278 (62.95%), Query Frame = 1
Query:    1 NTLVSTSTSIFPQTDPFNNVRGYYLFEDGEWFNYNIRTSPEMNSNNFWTVFSQTSTSSDYYFGSWGKGVLRHNINTKDISIFNASNSGLTGITNDRS-FLVIPGLDDDSNGDVWITSFDSDKPLNLQQNGSDEWKHFSKV-AIPTDNLYFNLFIDSNDKKWISLIDFSNNGKGLLVLDTGN-PLDETDDLYRKLTADGNNGNLPDEKITSIAEDNNGEVWIGTSRGIARFIFPDFIVESNNPNDYEAQWLINEDTAAISRFLLRDVNVSTIAVNEANQ 825
            N +V  ST+   + +  +N +GYY+++   W+N+N  T+  +NS  F   F  T T   YYFGSWG+GV RHN     + IF+ +NS L G  +D   F VI GL  DSN DVW+ S   D PL  Q  G + W    K       + Y  LFIDSND+KW++L + S+ G GL+VL+TG  P + +DD   KLT    NGNLPD K+ +I ED  GEVWIGT RGIARFIFP+ ++E   P + EAQWLI++DT A SRFLLRDVNVST+AVN ANQ
Sbjct:  344 NRMVVASTNESARNNAIDNAKGYYIYDGENWYNFNQSTNETINSFGFQQTFRTTITDDYYYFGSWGRGVARHNKEDNSVHIFDETNSTLRGWVDDSDQFPVISGLQTDSNDDVWLVSRFGDTPLYYQTPGDENWVPLPKANTAANSDEYVGLFIDSNDQKWVTLQNTSSAGNGLIVLNTGQEPANTSDDRSIKLTTGNGNGNLPDNKVNAIIEDKEGEVWIGTGRGIARFIFPELMIEGG-PAEREAQWLISDDTTASSRFLLRDVNVSTMAVNAANQ 620          
BLAST of mRNA_M-pyrifera_M_contig87567.20337.1 vs. uniprot
Match: UPI00036E4AE0 (hypothetical protein n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI00036E4AE0)

HSP 1 Score: 249 bits (637), Expect = 6.060e-74
Identity = 136/278 (48.92%), Postives = 177/278 (63.67%), Query Frame = 1
Query:    1 NTLVSTSTSIFPQTDPFNNVRGYYLFEDGEWFNYNIRTSPEMNSNNFWTVFSQTSTSSDYYFGSWGKGVLRHNINTKDISIFNASNSGLTGITNDRS-FLVIPGLDDDSNGDVWITSFDSDKPLNLQQNGSDEWKHFSKV-AIPTDNLYFNLFIDSNDKKWISLIDFSNNGKGLLVLDTG-NPLDETDDLYRKLTADGNNGNLPDEKITSIAEDNNGEVWIGTSRGIARFIFPDFIVESNNPNDYEAQWLINEDTAAISRFLLRDVNVSTIAVNEANQ 825
            N L++ ST+        +N +GYY+++   W NYN RT+  ++   +   F+ T T   YYFGSWG+GV RHNI    + IF+ +NS L G  +D   F VI GL  DSN DVW+ S   + PL  Q  G ++W    K  A    + YF LFIDS D+KWI+L + S  G GLLV++TG +P    DD   KLT+  N+GNLPD+K+ +I ED  GEVWIGT RGIARFIFP+ I++     + EAQWLINEDT A SRFLLRD+NVST+AVN AN+
Sbjct:  341 NVLIAASTNESAGNSAIDNAKGYYIYDGESWQNYNQRTNQVIDDFGYQQSFTSTITPDYYYFGSWGRGVARHNIEEGSVIIFDETNSTLRGWEDDNDQFPVISGLQTDSNDDVWLVSRYGNTPLYYQSPGDEDWTPLPKANAASVSDEYFGLFIDSFDQKWITLENTSTAGNGLLVVNTGTDPNSTADDASVKLTSGPNSGNLPDDKVNAIIEDKEGEVWIGTGRGIARFIFPELIIDGG-VQEREAQWLINEDTTAASRFLLRDINVSTMAVNAANE 617          
BLAST of mRNA_M-pyrifera_M_contig87567.20337.1 vs. uniprot
Match: UPI0003797EEC (hypothetical protein n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI0003797EEC)

HSP 1 Score: 242 bits (618), Expect = 3.740e-71
Identity = 125/257 (48.64%), Postives = 169/257 (65.76%), Query Frame = 1
Query:   58 VRGYYLFEDGEWFNYNIRTSPEMNSNNFWTVFSQTSTSSDYYFGSWGKGVLRHNINTKDISIFNASNSGLTGITNDRS-FLVIPGLDDDSNGDVWITSFDSDKPLNLQQNGSDEWKHFSKVAIPTDNLYFNLFIDSNDKKWISLIDFSNNGKGLLVLDTGNPLDETDDLYRKLTADGNNGNLPDEKITSIAEDNNGEVWIGTSRGIARFIFPDFIVESNNPNDYEAQWLINEDTAAISRFLLRDVNVSTIAVNEANQ 825
             +G+Y++ DG W N N  T+  +   NF  V + T T   YYFGSWG+G+ R++I T +  IF+ +NS L G   D   F VI GL  DSN DVW+ S  +  PL  QQ G ++W   +KV+      Y +LFIDS D+KWI L   S NG GLLV++T   LD +DD   +LT + NNGNLPD K+  I +D N EVWIGT RGIARF+FP+F+++ ++  + +AQWLINEDT+ +SRFLLRDVNVS +AV+ +N+
Sbjct:  367 AKGFYIYSDGNWTNENANTNEVIAQFNFQQVLTTTFTDKYYYFGSWGRGIARYDIETSETVIFDETNSTLRGWEADNPLFPVISGLSTDSNDDVWLVSRYATNPLYHQQPGDEDWTPIAKVSEANGLEYESLFIDSFDQKWIPLESTSTNGVGLLVINTNQTLDVSDDTAVRLTTETNNGNLPDNKVKVIVQDKNNEVWIGTERGIARFLFPEFVIDGSS-QERQAQWLINEDTSQVSRFLLRDVNVSAMAVSPSNE 622          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig87567.20337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8CFF5_9BACT1.250e-9755.68Uncharacterized protein n=2 Tax=Balneolaceae TaxID... [more]
A0A521EGS4_9BACT2.750e-8852.55Two component regulator propeller n=1 Tax=Gracilim... [more]
A0A6A8QBY6_9BACT3.330e-8048.73Uncharacterized protein n=1 Tax=Balneolaceae bacte... [more]
A0A1B6Y6D1_9BACT4.990e-7849.45Uncharacterized protein n=1 Tax=Balneola sp. EhC07... [more]
A0A3F3HZD0_9BACT1.320e-7749.45Uncharacterized protein n=5 Tax=Balneola sp. TaxID... [more]
A0A3M8FQ33_9BACT3.810e-7747.64Uncharacterized protein n=1 Tax=Balneola sp. TaxID... [more]
UPI00130008354.100e-7749.08hypothetical protein n=1 Tax=Gracilimonas amylolyt... [more]
A0A2D9FQM0_9BACT8.550e-7548.92Uncharacterized protein n=1 Tax=Balneola sp. TaxID... [more]
UPI00036E4AE06.060e-7448.92hypothetical protein n=1 Tax=Gracilimonas tropica ... [more]
UPI0003797EEC3.740e-7148.64hypothetical protein n=1 Tax=Balneola vulgaris Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig87567contigM-pyrifera_M_contig87567:3..827 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score252.7
Seed ortholog evalue2e-64
Seed eggNOG ortholog1121930.AQXG01000012_gene3185
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Two component regulator propeller
EggNOG OGs4NDWE@976,COG3292@1,COG3292@2
COG Functional cat.T
Best tax levelBacteroidetes
Best eggNOG OGNA|NA|NA
Exons1
Model size825
Cds size825
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816784.2533574-CDS-M-pyrifera_M_contig87567:2..8271622816784.2533574-CDS-M-pyrifera_M_contig87567:2..827Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87567 3..827 -
1692278176.450235-CDS-M-pyrifera_M_contig87567:2..8271692278176.450235-CDS-M-pyrifera_M_contig87567:2..827Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig87567 3..827 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig87567.20337.1prot_M-pyrifera_M_contig87567.20337.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig87567 3..827 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig87567.20337.1

>prot_M-pyrifera_M_contig87567.20337.1 ID=prot_M-pyrifera_M_contig87567.20337.1|Name=mRNA_M-pyrifera_M_contig87567.20337.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=275bp
NTLVSTSTSIFPQTDPFNNVRGYYLFEDGEWFNYNIRTSPEMNSNNFWTV
FSQTSTSSDYYFGSWGKGVLRHNINTKDISIFNASNSGLTGITNDRSFLV
IPGLDDDSNGDVWITSFDSDKPLNLQQNGSDEWKHFSKVAIPTDNLYFNL
FIDSNDKKWISLIDFSNNGKGLLVLDTGNPLDETDDLYRKLTADGNNGNL
PDEKITSIAEDNNGEVWIGTSRGIARFIFPDFIVESNNPNDYEAQWLINE
DTAAISRFLLRDVNVSTIAVNEANQ
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mRNA from alignment at M-pyrifera_M_contig87567:3..827-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig87567.20337.1 ID=mRNA_M-pyrifera_M_contig87567.20337.1|Name=mRNA_M-pyrifera_M_contig87567.20337.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=825bp|location=Sequence derived from alignment at M-pyrifera_M_contig87567:3..827- (Macrocystis pyrifera P11B4 male)
AATACATTAGTATCAACAAGTACATCTATTTTTCCACAAACCGATCCATT CAATAATGTACGAGGATATTATTTATTTGAAGATGGGGAATGGTTTAATT ACAACATCAGGACAAGCCCAGAAATGAACTCCAACAATTTTTGGACAGTT TTTTCTCAAACAAGTACATCAAGCGATTATTATTTTGGAAGTTGGGGTAA AGGAGTATTAAGACATAATATTAATACAAAAGATATATCTATTTTTAACG CAAGCAATTCGGGGCTAACGGGAATAACTAATGATAGATCCTTTTTAGTG ATTCCAGGGCTTGACGATGATAGCAATGGTGACGTATGGATCACAAGTTT TGATTCTGATAAACCCTTAAACCTGCAGCAAAATGGAAGCGATGAATGGA AACATTTTAGCAAAGTGGCTATTCCAACCGATAACCTTTATTTCAATCTT TTTATTGACTCTAATGACAAAAAATGGATTTCATTAATTGATTTCAGTAA TAATGGAAAAGGTTTACTTGTTTTAGATACTGGAAATCCTCTTGACGAAA CTGATGATCTATATAGAAAACTTACAGCAGACGGGAATAATGGAAATCTA CCTGATGAAAAGATTACAAGTATAGCAGAAGATAATAATGGGGAGGTGTG GATTGGTACTTCAAGAGGGATAGCAAGATTCATTTTCCCTGATTTTATTG TAGAGAGCAATAACCCTAATGATTATGAAGCCCAGTGGTTGATTAACGAA GACACGGCAGCAATTTCGCGGTTTTTACTTCGTGATGTAAATGTTTCTAC AATTGCTGTAAATGAAGCAAATCAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig87567:3..827-

>mRNA_M-pyrifera_M_contig87567.20337.1 ID=mRNA_M-pyrifera_M_contig87567.20337.1|Name=mRNA_M-pyrifera_M_contig87567.20337.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1650bp|location=Sequence derived from alignment at M-pyrifera_M_contig87567:3..827- (Macrocystis pyrifera P11B4 male)
AATACATTAGTATCAACAAGTACATCTATTTTTCCACAAACCGATCCATT
CAATAATGTACGAGGATATTATTTATTTGAAGATGGGGAATGGTTTAATT
ACAACATCAGGACAAGCCCAGAAATGAACTCCAACAATTTTTGGACAGTT
TTTTCTCAAACAAGTACATCAAGCGATTATTATTTTGGAAGTTGGGGTAA
AGGAGTATTAAGACATAATATTAATACAAAAGATATATCTATTTTTAACG
CAAGCAATTCGGGGCTAACGGGAATAACTAATGATAGATCCTTTTTAGTG
ATTCCAGGGCTTGACGATGATAGCAATGGTGACGTATGGATCACAAGTTT
TGATTCTGATAAACCCTTAAACCTGCAGCAAAATGGAAGCGATGAATGGA
AACATTTTAGCAAAGTGGCTATTCCAACCGATAACCTTTATTTCAATCTT
TTTATTGACTCTAATGACAAAAAATGGATTTCATTAATTGATTTCAGTAA
TAATGGAAAAGGTTTACTTGTTTTAGATACTGGAAATCCTCTTGACGAAA
CTGATGATCTATATAGAAAACTTACAGCAGACGGGAATAATGGAAATCTA
CCTGATGAAAAGATTACAAGTATAGCAGAAGATAATAATGGGGAGGTGTG
GATTGGTACTTCAAGAGGGATAGCAAGATTCATTTTCCCTGATTTTATTG
TAGAGAGCAATAACCCTAATGATTATGAAGCCCAGTGGTTGATTAACGAA
GACACGGCAGCAATTTCGCGGTTTTTACTTCGTGATGTAAATGTTTCTAC
AATTGCTGTAAATGAAGCAAATCAGAATACATTAGTATCAACAAGTACAT
CTATTTTTCCACAAACCGATCCATTCAATAATGTACGAGGATATTATTTA
TTTGAAGATGGGGAATGGTTTAATTACAACATCAGGACAAGCCCAGAAAT
GAACTCCAACAATTTTTGGACAGTTTTTTCTCAAACAAGTACATCAAGCG
ATTATTATTTTGGAAGTTGGGGTAAAGGAGTATTAAGACATAATATTAAT
ACAAAAGATATATCTATTTTTAACGCAAGCAATTCGGGGCTAACGGGAAT
AACTAATGATAGATCCTTTTTAGTGATTCCAGGGCTTGACGATGATAGCA
ATGGTGACGTATGGATCACAAGTTTTGATTCTGATAAACCCTTAAACCTG
CAGCAAAATGGAAGCGATGAATGGAAACATTTTAGCAAAGTGGCTATTCC
AACCGATAACCTTTATTTCAATCTTTTTATTGACTCTAATGACAAAAAAT
GGATTTCATTAATTGATTTCAGTAATAATGGAAAAGGTTTACTTGTTTTA
GATACTGGAAATCCTCTTGACGAAACTGATGATCTATATAGAAAACTTAC
AGCAGACGGGAATAATGGAAATCTACCTGATGAAAAGATTACAAGTATAG
CAGAAGATAATAATGGGGAGGTGTGGATTGGTACTTCAAGAGGGATAGCA
AGATTCATTTTCCCTGATTTTATTGTAGAGAGCAATAACCCTAATGATTA
TGAAGCCCAGTGGTTGATTAACGAAGACACGGCAGCAATTTCGCGGTTTT
TACTTCGTGATGTAAATGTTTCTACAATTGCTGTAAATGAAGCAAATCAG
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